{"id":"https://openalex.org/W1891340464","doi":"https://doi.org/10.1089/big.2013.0036","title":"Near Real-Time Processing of Proteomics Data Using Hadoop","display_name":"Near Real-Time Processing of Proteomics Data Using Hadoop","publication_year":2014,"publication_date":"2014-02-14","ids":{"openalex":"https://openalex.org/W1891340464","doi":"https://doi.org/10.1089/big.2013.0036","mag":"1891340464","pmid":"https://pubmed.ncbi.nlm.nih.gov/27447310"},"language":"en","primary_location":{"id":"doi:10.1089/big.2013.0036","is_oa":true,"landing_page_url":"https://doi.org/10.1089/big.2013.0036","pdf_url":null,"source":{"id":"https://openalex.org/S4210226731","display_name":"Big Data","issn_l":"2167-6461","issn":["2167-6461","2167-647X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320443","host_organization_name":"Mary Ann Liebert, Inc.","host_organization_lineage":["https://openalex.org/P4310320443"],"host_organization_lineage_names":["Mary Ann Liebert, Inc."],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Big Data","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1089/big.2013.0036","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056758103","display_name":"Chris Hillman","orcid":null},"institutions":[{"id":"https://openalex.org/I177639307","display_name":"University of Dundee","ror":"https://ror.org/03h2bxq36","country_code":"GB","type":"education","lineage":["https://openalex.org/I177639307"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Chris Hillman","raw_affiliation_strings":["University of Dundee","1 School of Computing, University of Dundee , Nethergate, Dundee, United Kingdom "],"affiliations":[{"raw_affiliation_string":"University of Dundee","institution_ids":["https://openalex.org/I177639307"]},{"raw_affiliation_string":"1 School of Computing, University of Dundee , Nethergate, Dundee, United Kingdom ","institution_ids":["https://openalex.org/I177639307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108144390","display_name":"Yasmeen Ahmad","orcid":null},"institutions":[{"id":"https://openalex.org/I177639307","display_name":"University of Dundee","ror":"https://ror.org/03h2bxq36","country_code":"GB","type":"education","lineage":["https://openalex.org/I177639307"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Yasmeen Ahmad","raw_affiliation_strings":["University of Dundee","2 Centre for Gene Regulation & Expression, University of Dundee , Nethergate, Dundee, United Kingdom "],"affiliations":[{"raw_affiliation_string":"University of Dundee","institution_ids":["https://openalex.org/I177639307"]},{"raw_affiliation_string":"2 Centre for Gene Regulation & Expression, University of Dundee , Nethergate, Dundee, United Kingdom ","institution_ids":["https://openalex.org/I177639307"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074287571","display_name":"Mark Whitehorn","orcid":null},"institutions":[{"id":"https://openalex.org/I177639307","display_name":"University of Dundee","ror":"https://ror.org/03h2bxq36","country_code":"GB","type":"education","lineage":["https://openalex.org/I177639307"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Mark Whitehorn","raw_affiliation_strings":["University of Dundee","1 School of Computing, University of Dundee , Nethergate, Dundee, United Kingdom "],"affiliations":[{"raw_affiliation_string":"University of Dundee","institution_ids":["https://openalex.org/I177639307"]},{"raw_affiliation_string":"1 School of Computing, University of Dundee , Nethergate, Dundee, United Kingdom ","institution_ids":["https://openalex.org/I177639307"]}]},{"author_position":"last","author":{"id":null,"display_name":"Andy Cobley","orcid":null},"institutions":[{"id":"https://openalex.org/I177639307","display_name":"University of Dundee","ror":"https://ror.org/03h2bxq36","country_code":"GB","type":"education","lineage":["https://openalex.org/I177639307"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Andy Cobley","raw_affiliation_strings":["University of Dundee","1 School of Computing, University of Dundee , Nethergate, Dundee, United Kingdom "],"affiliations":[{"raw_affiliation_string":"University of Dundee","institution_ids":["https://openalex.org/I177639307"]},{"raw_affiliation_string":"1 School of Computing, University of Dundee , Nethergate, Dundee, United Kingdom ","institution_ids":["https://openalex.org/I177639307"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5056758103"],"corresponding_institution_ids":["https://openalex.org/I177639307"],"apc_list":null,"apc_paid":null,"fwci":0.647,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.6431833,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"2","issue":"1","first_page":"44","last_page":"49"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8044452667236328},{"id":"https://openalex.org/keywords/java","display_name":"Java","score":0.6968942284584045},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.6835259199142456},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.6588847041130066},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.6052491068840027},{"id":"https://openalex.org/keywords/data-pre-processing","display_name":"Data pre-processing","score":0.6016077399253845},{"id":"https://openalex.org/keywords/data-processing","display_name":"Data processing","score":0.5775402784347534},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.5536273717880249},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4941568672657013},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40649473667144775},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3950158953666687},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.19635382294654846},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11435535550117493},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08626618981361389}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8044452667236328},{"id":"https://openalex.org/C548217200","wikidata":"https://www.wikidata.org/wiki/Q251","display_name":"Java","level":2,"score":0.6968942284584045},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.6835259199142456},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.6588847041130066},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.6052491068840027},{"id":"https://openalex.org/C10551718","wikidata":"https://www.wikidata.org/wiki/Q5227332","display_name":"Data pre-processing","level":2,"score":0.6016077399253845},{"id":"https://openalex.org/C138827492","wikidata":"https://www.wikidata.org/wiki/Q6661985","display_name":"Data processing","level":2,"score":0.5775402784347534},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.5536273717880249},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4941568672657013},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40649473667144775},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3950158953666687},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.19635382294654846},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11435535550117493},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08626618981361389},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1089/big.2013.0036","is_oa":true,"landing_page_url":"https://doi.org/10.1089/big.2013.0036","pdf_url":null,"source":{"id":"https://openalex.org/S4210226731","display_name":"Big Data","issn_l":"2167-6461","issn":["2167-6461","2167-647X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320443","host_organization_name":"Mary Ann Liebert, Inc.","host_organization_lineage":["https://openalex.org/P4310320443"],"host_organization_lineage_names":["Mary Ann Liebert, Inc."],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Big Data","raw_type":"journal-article"},{"id":"pmid:27447310","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27447310","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Big data","raw_type":null},{"id":"pmh:oai:discovery.dundee.ac.uk:openaire_cris_publications/83999479-b34d-43ba-8737-4b98688caa45","is_oa":true,"landing_page_url":"https://discovery.dundee.ac.uk/en/publications/83999479-b34d-43ba-8737-4b98688caa45","pdf_url":null,"source":{"id":"https://openalex.org/S4306400523","display_name":"Discovery Research Portal (University of Dundee)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177639307","host_organization_name":"University of Dundee","host_organization_lineage":["https://openalex.org/I177639307"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Hillman, C, Ahmad, Y, Whitehorn, M & Cobley, A 2014, 'Near real-time processing of proteomics data using Hadoop.', Big Data, vol. 2, no. 1, pp. 44-49. https://doi.org/10.1089/big.2013.0036","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":{"id":"doi:10.1089/big.2013.0036","is_oa":true,"landing_page_url":"https://doi.org/10.1089/big.2013.0036","pdf_url":null,"source":{"id":"https://openalex.org/S4210226731","display_name":"Big Data","issn_l":"2167-6461","issn":["2167-6461","2167-647X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320443","host_organization_name":"Mary Ann Liebert, Inc.","host_organization_lineage":["https://openalex.org/P4310320443"],"host_organization_lineage_names":["Mary Ann Liebert, Inc."],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Big Data","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/12","score":0.5,"display_name":"Responsible consumption and production"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320310838","display_name":"University of Dundee","ror":"https://ror.org/03h2bxq36"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":6,"referenced_works":["https://openalex.org/W112666466","https://openalex.org/W1991451169","https://openalex.org/W2003584736","https://openalex.org/W2079858842","https://openalex.org/W2162089072","https://openalex.org/W2173213060"],"related_works":["https://openalex.org/W2989490741","https://openalex.org/W138569904","https://openalex.org/W2367545121","https://openalex.org/W4248881655","https://openalex.org/W2482165163","https://openalex.org/W3092506759","https://openalex.org/W2390914021","https://openalex.org/W3010890513","https://openalex.org/W3138271675","https://openalex.org/W4220726286"],"abstract_inverted_index":{"This":[0],"article":[1],"presents":[2],"a":[3,62,109],"near":[4],"real-time":[5],"processing":[6,23,60],"solution":[7,13],"using":[8,115],"MapReduce":[9,120],"and":[10,22,33,105,118,125],"Hadoop.":[11],"The":[12],"is":[14],"aimed":[15],"at":[16],"some":[17],"of":[18,40,70,91,98],"the":[19,26,68,73,89,100,113,119],"data":[20,41,75,83,102,114],"management":[21],"challenges":[24],"facing":[25],"life":[27],"sciences":[28],"community.":[29],"Research":[30],"into":[31],"genes":[32],"their":[34],"product":[35],"proteins":[36],"generates":[37],"huge":[38],"volumes":[39],"that":[42],"must":[43],"be":[44,52],"extensively":[45],"preprocessed":[46],"before":[47],"any":[48],"biological":[49],"insight":[50],"can":[51],"gained.":[53],"In":[54],"order":[55],"to":[56,81,122],"carry":[57],"out":[58],"this":[59],"in":[61,88,103],"timely":[63],"manner,":[64],"we":[65,95,107],"have":[66],"investigated":[67],"use":[69],"techniques":[71],"from":[72,85],"big":[74],"field.":[76],"These":[77],"are":[78],"applied":[79],"specifically":[80],"process":[82,110],"resulting":[84],"mass":[86],"spectrometers":[87],"course":[90],"proteomic":[92],"experiments.":[93],"Here":[94],"present":[96],"methods":[97],"handling":[99],"raw":[101],"Hadoop,":[104],"then":[106],"investigate":[108],"for":[111],"preprocessing":[112],"Java":[116],"code":[117],"framework":[121],"identify":[123],"2D":[124],"3D":[126],"peaks.":[127]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
