{"id":"https://openalex.org/W2038983042","doi":"https://doi.org/10.1089/cmb.2007.0008","title":"Statistical Estimation of Statistical Mechanical Models: Helix-Coil Theory and Peptide Helicity Prediction","display_name":"Statistical Estimation of Statistical Mechanical Models: Helix-Coil Theory and Peptide Helicity Prediction","publication_year":2007,"publication_date":"2007-11-29","ids":{"openalex":"https://openalex.org/W2038983042","doi":"https://doi.org/10.1089/cmb.2007.0008","mag":"2038983042","pmid":"https://pubmed.ncbi.nlm.nih.gov/18047425"},"language":"en","primary_location":{"id":"doi:10.1089/cmb.2007.0008","is_oa":false,"landing_page_url":"https://doi.org/10.1089/cmb.2007.0008","pdf_url":null,"source":{"id":"https://openalex.org/S78571599","display_name":"Journal of Computational Biology","issn_l":"1066-5277","issn":["1066-5277","1557-8666"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320443","host_organization_name":"Mary Ann Liebert, Inc.","host_organization_lineage":["https://openalex.org/P4310320443"],"host_organization_lineage_names":["Mary Ann Liebert, Inc."],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computational Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077085817","display_name":"Scott C. Schmidler","orcid":"https://orcid.org/0009-0006-3733-3716"},"institutions":[{"id":"https://openalex.org/I4210133369","display_name":"Decision Sciences (United States)","ror":"https://ror.org/03gcvf773","country_code":"US","type":"company","lineage":["https://openalex.org/I4210133369"]},{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Scott C. Schmidler","raw_affiliation_strings":["Institute of Statistics and Decision Sciences, Duke University, Durham, North Carolina"],"affiliations":[{"raw_affiliation_string":"Institute of Statistics and Decision Sciences, Duke University, Durham, North Carolina","institution_ids":["https://openalex.org/I4210133369","https://openalex.org/I170897317"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027324518","display_name":"Joseph E. Lucas","orcid":null},"institutions":[{"id":"https://openalex.org/I170897317","display_name":"Duke University","ror":"https://ror.org/00py81415","country_code":"US","type":"education","lineage":["https://openalex.org/I170897317"]},{"id":"https://openalex.org/I4210133369","display_name":"Decision Sciences (United States)","ror":"https://ror.org/03gcvf773","country_code":"US","type":"company","lineage":["https://openalex.org/I4210133369"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph E. Lucas","raw_affiliation_strings":["Institute of Statistics and Decision Sciences, Duke University, Durham, North Carolina"],"affiliations":[{"raw_affiliation_string":"Institute of Statistics and Decision Sciences, Duke University, Durham, North Carolina","institution_ids":["https://openalex.org/I4210133369","https://openalex.org/I170897317"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040820481","display_name":"Terrence G. Oas","orcid":"https://orcid.org/0000-0002-3067-2743"},"institutions":[{"id":"https://openalex.org/I4210126298","display_name":"Duke Medical Center","ror":"https://ror.org/03njmea73","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876"]},{"id":"https://openalex.org/I4210153043","display_name":"Duke University Hospital","ror":"https://ror.org/04bct7p84","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210126298","https://openalex.org/I4210144876","https://openalex.org/I4210144876","https://openalex.org/I4210153043"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Terrence G. Oas","raw_affiliation_strings":["Department of Biochemistry, Duke University Medical Center, Durham, North Carolina"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, Duke University Medical Center, Durham, North Carolina","institution_ids":["https://openalex.org/I4210153043","https://openalex.org/I4210126298"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5077085817"],"corresponding_institution_ids":["https://openalex.org/I170897317","https://openalex.org/I4210133369"],"apc_list":null,"apc_paid":null,"fwci":0.2689,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.58405121,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"14","issue":"10","first_page":"1287","last_page":"1310"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/helicity","display_name":"Helicity","score":0.8231143951416016},{"id":"https://openalex.org/keywords/electromagnetic-coil","display_name":"Electromagnetic coil","score":0.5781421065330505},{"id":"https://openalex.org/keywords/helix","display_name":"Helix (gastropod)","score":0.5174415707588196},{"id":"https://openalex.org/keywords/statistical-analysis","display_name":"Statistical analysis","score":0.4609798192977905},{"id":"https://openalex.org/keywords/statistical-model","display_name":"Statistical model","score":0.4556179642677307},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.409842312335968},{"id":"https://openalex.org/keywords/statistical-physics","display_name":"Statistical physics","score":0.4060986042022705},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4031457006931305},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.35726743936538696},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.335142582654953},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3303794264793396},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3082945942878723},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.27007561922073364},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.2148321270942688},{"id":"https://openalex.org/keywords/particle-physics","display_name":"Particle physics","score":0.1924893856048584}],"concepts":[{"id":"https://openalex.org/C2775859700","wikidata":"https://www.wikidata.org/wiki/Q568855","display_name":"Helicity","level":2,"score":0.8231143951416016},{"id":"https://openalex.org/C30403606","wikidata":"https://www.wikidata.org/wiki/Q2981904","display_name":"Electromagnetic coil","level":2,"score":0.5781421065330505},{"id":"https://openalex.org/C2778530040","wikidata":"https://www.wikidata.org/wiki/Q1937315","display_name":"Helix (gastropod)","level":3,"score":0.5174415707588196},{"id":"https://openalex.org/C2986587452","wikidata":"https://www.wikidata.org/wiki/Q938438","display_name":"Statistical analysis","level":2,"score":0.4609798192977905},{"id":"https://openalex.org/C114289077","wikidata":"https://www.wikidata.org/wiki/Q3284399","display_name":"Statistical model","level":2,"score":0.4556179642677307},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.409842312335968},{"id":"https://openalex.org/C121864883","wikidata":"https://www.wikidata.org/wiki/Q677916","display_name":"Statistical physics","level":1,"score":0.4060986042022705},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4031457006931305},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.35726743936538696},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.335142582654953},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3303794264793396},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3082945942878723},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.27007561922073364},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.2148321270942688},{"id":"https://openalex.org/C109214941","wikidata":"https://www.wikidata.org/wiki/Q18334","display_name":"Particle physics","level":1,"score":0.1924893856048584},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C2779965526","wikidata":"https://www.wikidata.org/wiki/Q308841","display_name":"Snail","level":2,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006863","descriptor_name":"Hydrogen-Ion Concentration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006863","descriptor_name":"Hydrogen-Ion Concentration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006863","descriptor_name":"Hydrogen-Ion Concentration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006863","descriptor_name":"Hydrogen-Ion Concentration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057927","descriptor_name":"Hydrophobic and Hydrophilic Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057927","descriptor_name":"Hydrophobic and Hydrophilic Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057927","descriptor_name":"Hydrophobic and Hydrophilic Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057927","descriptor_name":"Hydrophobic and Hydrophilic Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1089/cmb.2007.0008","is_oa":false,"landing_page_url":"https://doi.org/10.1089/cmb.2007.0008","pdf_url":null,"source":{"id":"https://openalex.org/S78571599","display_name":"Journal of Computational Biology","issn_l":"1066-5277","issn":["1066-5277","1557-8666"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320443","host_organization_name":"Mary Ann Liebert, Inc.","host_organization_lineage":["https://openalex.org/P4310320443"],"host_organization_lineage_names":["Mary Ann Liebert, Inc."],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Computational Biology","raw_type":"journal-article"},{"id":"pmid:18047425","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18047425","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of computational biology : a journal of computational molecular cell biology","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.142.7546","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.142.7546","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.stat.duke.edu/~scs/Papers/JCB_HelixCoil_07.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":69,"referenced_works":["https://openalex.org/W45374770","https://openalex.org/W619899907","https://openalex.org/W1558188591","https://openalex.org/W1593793857","https://openalex.org/W1648445109","https://openalex.org/W1950309067","https://openalex.org/W1965659262","https://openalex.org/W1966743338","https://openalex.org/W1974885083","https://openalex.org/W1981069567","https://openalex.org/W1987582479","https://openalex.org/W1991108537","https://openalex.org/W1996073320","https://openalex.org/W1999330255","https://openalex.org/W2000468695","https://openalex.org/W2002272439","https://openalex.org/W2003434089","https://openalex.org/W2003697928","https://openalex.org/W2007886752","https://openalex.org/W2017334692","https://openalex.org/W2022415265","https://openalex.org/W2023445161","https://openalex.org/W2026395206","https://openalex.org/W2028215008","https://openalex.org/W2031249665","https://openalex.org/W2031273789","https://openalex.org/W2033765726","https://openalex.org/W2039104547","https://openalex.org/W2041966417","https://openalex.org/W2043793450","https://openalex.org/W2045656233","https://openalex.org/W2045994733","https://openalex.org/W2047219805","https://openalex.org/W2049633694","https://openalex.org/W2049708286","https://openalex.org/W2053797131","https://openalex.org/W2056770911","https://openalex.org/W2057157558","https://openalex.org/W2073745636","https://openalex.org/W2081359387","https://openalex.org/W2082954178","https://openalex.org/W2083939457","https://openalex.org/W2086403919","https://openalex.org/W2087894810","https://openalex.org/W2087928415","https://openalex.org/W2092880728","https://openalex.org/W2096577486","https://openalex.org/W2099622125","https://openalex.org/W2118250094","https://openalex.org/W2119423166","https://openalex.org/W2123768455","https://openalex.org/W2125781844","https://openalex.org/W2125838338","https://openalex.org/W2126521510","https://openalex.org/W2126912623","https://openalex.org/W2130361965","https://openalex.org/W2130416410","https://openalex.org/W2130904570","https://openalex.org/W2134769748","https://openalex.org/W2135046866","https://openalex.org/W2137639276","https://openalex.org/W2150234795","https://openalex.org/W2150654191","https://openalex.org/W2151654128","https://openalex.org/W2154106236","https://openalex.org/W2154910270","https://openalex.org/W3047703793","https://openalex.org/W4237519894","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2350702655","https://openalex.org/W2026012944","https://openalex.org/W2359486277","https://openalex.org/W2289334277","https://openalex.org/W2785984867","https://openalex.org/W2355334280","https://openalex.org/W3122113541","https://openalex.org/W2062963425","https://openalex.org/W2349367743","https://openalex.org/W755468467"],"abstract_inverted_index":{"Analysis":[0],"of":[1,9,13,18,43,68,125,134,143,176],"biopolymer":[2],"sequences":[3],"and":[4,60,132,137,182,189,193,196],"structures":[5],"generally":[6],"adopts":[7],"one":[8],"two":[10,45],"approaches:":[11],"use":[12],"detailed":[14],"biophysical":[15,54],"theoretical":[16],"models":[17,28,200],"the":[19,63,96,112,123,156,164,207],"system":[20],"with":[21],"experimentally-determined":[22],"parameters,":[23,98],"or":[24],"largely":[25],"empirical":[26],"statistical":[27,74,106,141],"obtained":[29],"by":[30,73],"extracting":[31],"parameters":[32,67],"from":[33],"large":[34,78],"datasets.":[35],"In":[36,163],"this":[37,69,126,161],"work,":[38],"we":[39,166],"demonstrate":[40,122],"a":[41,52,77,101,148],"merger":[42],"these":[44],"approaches":[46],"using":[47,80],"Bayesian":[48],"statistics.":[49],"We":[50,121],"adopt":[51],"common":[53],"model":[55,70,117],"for":[56,108,114,140,160,173],"local":[57],"protein":[58],"folding":[59],"peptide":[61],"configuration,":[62],"helix-coil":[64,191],"model.":[65,104],"The":[66],"are":[71,90,119],"estimated":[72,97],"fitting":[75],"to":[76,92],"dataset,":[79],"prior":[81],"distributions":[82],"based":[83],"on":[84],"experimental":[85],"data.":[86],"L(1)-norm":[87],"shrinkage":[88],"priors":[89],"applied":[91],"induce":[93],"sparsity":[94],"among":[95],"resulting":[99],"in":[100,111,151,206],"significantly":[102],"simplified":[103],"Formal":[105],"procedures":[107],"evaluating":[109],"support":[110],"data":[113],"previously":[115],"proposed":[116],"extensions":[118],"presented.":[120],"advantages":[124],"approach":[127,146],"including":[128,179],"improved":[129],"prediction":[130,135],"accuracy":[131],"quantification":[133],"uncertainty,":[136],"discuss":[138],"opportunities":[139],"design":[142],"experiments.":[144],"Our":[145],"yields":[147],"39%":[149],"improvement":[150],"mean-squared":[152],"predictive":[153],"error":[154],"over":[155],"current":[157],"best":[158],"algorithm":[159,172],"problem.":[162],"process":[165],"also":[167],"provide":[168],"an":[169,184],"efficient":[170],"recursive":[171],"exact":[174],"calculation":[175],"ensemble":[177],"helicity":[178],"sidechain":[180],"interactions,":[181],"derive":[183],"explicit":[185],"relation":[186],"between":[187],"homo-":[188],"heteropolymer":[190],"theories":[192],"Markov":[194,199],"chains":[195],"(non-standard)":[197],"hidden":[198],"respectively,":[201],"which":[202],"has":[203],"not":[204],"appeared":[205],"literature":[208],"previously.":[209]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}