{"id":"https://openalex.org/W1993174081","doi":"https://doi.org/10.1089/153623103322006625","title":"Whither Biological Database Research?","display_name":"Whither Biological Database Research?","publication_year":2003,"publication_date":"2003-01-01","ids":{"openalex":"https://openalex.org/W1993174081","doi":"https://doi.org/10.1089/153623103322006625","mag":"1993174081","pmid":"https://pubmed.ncbi.nlm.nih.gov/12831558"},"language":"en","primary_location":{"id":"doi:10.1089/153623103322006625","is_oa":false,"landing_page_url":"https://doi.org/10.1089/153623103322006625","pdf_url":null,"source":{"id":"https://openalex.org/S116972989","display_name":"OMICS A Journal of Integrative Biology","issn_l":"1536-2310","issn":["1536-2310","1557-8100"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320443","host_organization_name":"Mary Ann Liebert, Inc.","host_organization_lineage":["https://openalex.org/P4310320443"],"host_organization_lineage_names":["Mary Ann Liebert, Inc."],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"OMICS: A Journal of Integrative Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040095281","display_name":"Toni Kazic","orcid":"https://orcid.org/0000-0001-5971-2406"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Toni Kazic","raw_affiliation_strings":["Department of Computer Engineering and Computer Science, University of Missouri, Columbia, Missouri","Department of Computer Engineering and Computer Science, University of Missouri, Columbia, Missouri 65201, USA. toni@athe.cecs.missouri.edu"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering and Computer Science, University of Missouri, Columbia, Missouri","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Computer Engineering and Computer Science, University of Missouri, Columbia, Missouri 65201, USA. toni@athe.cecs.missouri.edu","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067868228","display_name":"E. H. Coe","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ed Coe","raw_affiliation_strings":[""],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043861312","display_name":"Mary L. Polacco","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mary Polacco","raw_affiliation_strings":[""],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013031415","display_name":"Chi\u2010Ren Shyu","orcid":"https://orcid.org/0000-0001-9197-9522"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chi-Ren Shyu","raw_affiliation_strings":[""],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.06971036,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"7","issue":"1","first_page":"61","last_page":"65"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.736522376537323},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6938691139221191},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.6548956036567688},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5691217184066772},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.477774977684021},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.44287604093551636},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.35451406240463257},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3286495804786682},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.12689679861068726},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.0903918445110321},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08150464296340942}],"concepts":[{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.736522376537323},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6938691139221191},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.6548956036567688},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5691217184066772},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.477774977684021},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.44287604093551636},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.35451406240463257},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3286495804786682},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.12689679861068726},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.0903918445110321},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08150464296340942},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1089/153623103322006625","is_oa":false,"landing_page_url":"https://doi.org/10.1089/153623103322006625","pdf_url":null,"source":{"id":"https://openalex.org/S116972989","display_name":"OMICS A Journal of Integrative Biology","issn_l":"1536-2310","issn":["1536-2310","1557-8100"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320443","host_organization_name":"Mary Ann Liebert, Inc.","host_organization_lineage":["https://openalex.org/P4310320443"],"host_organization_lineage_names":["Mary Ann Liebert, Inc."],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"OMICS: A Journal of Integrative Biology","raw_type":"journal-article"},{"id":"pmid:12831558","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/12831558","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Omics : a journal of integrative biology","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":8,"referenced_works":["https://openalex.org/W1577629884","https://openalex.org/W1972324328","https://openalex.org/W2050006154","https://openalex.org/W2090126151","https://openalex.org/W2103017472","https://openalex.org/W2106453718","https://openalex.org/W2156364742","https://openalex.org/W2171667218"],"related_works":["https://openalex.org/W4312158493","https://openalex.org/W2033835987","https://openalex.org/W4248750016","https://openalex.org/W4205092877","https://openalex.org/W1824784554","https://openalex.org/W3141940143","https://openalex.org/W1561860948","https://openalex.org/W1979295894","https://openalex.org/W2267080198","https://openalex.org/W2904651995"],"abstract_inverted_index":{"We":[0,22],"consider":[1],"how":[2],"the":[3,11,33,41,50,53,74],"landscape":[4],"of":[5,26,37,52,88,97],"biological":[6],"databases":[7],"may":[8],"evolve":[9],"in":[10],"future,":[12],"and":[13,35,85,90],"what":[14],"research":[15],"is":[16],"needed":[17],"to":[18,60,66,76],"realize":[19],"this":[20],"evolution.":[21],"suggest":[23],"today's":[24],"dispersal":[25],"diverse":[27],"resources":[28,71],"will":[29,64],"only":[30],"increase":[31],"as":[32,73],"number":[34],"size":[36],"those":[38],"resources,":[39],"driving":[40],"need":[42,65,83],"for":[43],"semantic":[44],"interoperability":[45],"even":[46],"more":[47],"strongly.":[48],"Because":[49],"complexity":[51],"questions":[54],"biologists":[55],"want":[56],"answered":[57],"automatically":[58],"continues":[59],"rapidly":[61],"escalate,":[62],"we":[63,81],"draw":[67],"upon":[68],"high-performance":[69],"computing":[70],"such":[72],"GRID":[75],"process":[77],"complex":[78],"queries.":[79],"Finally,":[80],"still":[82],"data,":[84],"our":[86],"ways":[87],"acquiring":[89],"curating":[91],"data":[92],"must":[93],"improve":[94],"by":[95],"orders":[96],"magnitude.":[98]},"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
