{"id":"https://openalex.org/W4413778014","doi":"https://doi.org/10.1088/2632-2153/adfffc","title":"Does this smell the same? Learning representations of olfactory mixtures using inductive biases","display_name":"Does this smell the same? Learning representations of olfactory mixtures using inductive biases","publication_year":2025,"publication_date":"2025-08-27","ids":{"openalex":"https://openalex.org/W4413778014","doi":"https://doi.org/10.1088/2632-2153/adfffc"},"language":"en","primary_location":{"id":"doi:10.1088/2632-2153/adfffc","is_oa":true,"landing_page_url":"https://doi.org/10.1088/2632-2153/adfffc","pdf_url":"https://iopscience.iop.org/article/10.1088/2632-2153/adfffc/pdf","source":{"id":"https://openalex.org/S4210200687","display_name":"Machine Learning Science and Technology","issn_l":"2632-2153","issn":["2632-2153"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320083","host_organization_name":"IOP Publishing","host_organization_lineage":["https://openalex.org/P4310320083","https://openalex.org/P4310311669"],"host_organization_lineage_names":["IOP Publishing","Institute of Physics"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Machine Learning: Science and Technology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://iopscience.iop.org/article/10.1088/2632-2153/adfffc/pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078632284","display_name":"Gary Tom","orcid":"https://orcid.org/0000-0002-8470-6515"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I4210127509","display_name":"Vector Institute","ror":"https://ror.org/03kqdja62","country_code":"CA","type":"facility","lineage":["https://openalex.org/I4210127509"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Gary Tom","raw_affiliation_strings":["Department of Chemistry, University of Toronto, Toronto, Canada","Vector Institute for Artificial Intelligence, Toronto, Canada"],"raw_orcid":"https://orcid.org/0000-0002-8470-6515","affiliations":[{"raw_affiliation_string":"Department of Chemistry, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Vector Institute for Artificial Intelligence, Toronto, Canada","institution_ids":["https://openalex.org/I4210127509"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092908195","display_name":"Cher Tian Ser","orcid":"https://orcid.org/0000-0003-0597-5758"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I4210127509","display_name":"Vector Institute","ror":"https://ror.org/03kqdja62","country_code":"CA","type":"facility","lineage":["https://openalex.org/I4210127509"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Cher Tian Ser","raw_affiliation_strings":["Department of Chemistry, University of Toronto, Toronto, Canada","Vector Institute for Artificial Intelligence, Toronto, Canada"],"raw_orcid":"https://orcid.org/0000-0003-0597-5758","affiliations":[{"raw_affiliation_string":"Department of Chemistry, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Vector Institute for Artificial Intelligence, Toronto, Canada","institution_ids":["https://openalex.org/I4210127509"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5093735673","display_name":"Ella Miray Rajaonson","orcid":"https://orcid.org/0009-0008-5015-5795"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I4210127509","display_name":"Vector Institute","ror":"https://ror.org/03kqdja62","country_code":"CA","type":"facility","lineage":["https://openalex.org/I4210127509"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Ella M Rajaonson","raw_affiliation_strings":["Department of Chemistry, University of Toronto, Toronto, Canada","Vector Institute for Artificial Intelligence, Toronto, Canada"],"raw_orcid":"https://orcid.org/0009-0008-5015-5795","affiliations":[{"raw_affiliation_string":"Department of Chemistry, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Vector Institute for Artificial Intelligence, Toronto, Canada","institution_ids":["https://openalex.org/I4210127509"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068032257","display_name":"Stanley Lo","orcid":"https://orcid.org/0000-0003-0278-5318"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I4210127509","display_name":"Vector Institute","ror":"https://ror.org/03kqdja62","country_code":"CA","type":"facility","lineage":["https://openalex.org/I4210127509"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Stanley Lo","raw_affiliation_strings":["Department of Chemistry, University of Toronto, Toronto, Canada","Vector Institute for Artificial Intelligence, Toronto, Canada"],"raw_orcid":"https://orcid.org/0000-0003-0278-5318","affiliations":[{"raw_affiliation_string":"Department of Chemistry, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Vector Institute for Artificial Intelligence, Toronto, Canada","institution_ids":["https://openalex.org/I4210127509"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070791541","display_name":"Hyun Suk Park","orcid":null},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Hyun Suk Park","raw_affiliation_strings":["Department of Chemistry, University of Toronto, Toronto, Canada"],"raw_orcid":"https://orcid.org/0000-0002-2438-6206","affiliations":[{"raw_affiliation_string":"Department of Chemistry, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003186226","display_name":"Brian Lee","orcid":"https://orcid.org/0000-0002-0920-3520"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Brian K Lee","raw_affiliation_strings":["Independent, Boston, MA, United States of America"],"raw_orcid":"https://orcid.org/0000-0002-0920-3520","affiliations":[{"raw_affiliation_string":"Independent, Boston, MA, United States of America","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065990295","display_name":"Benjam\u00edn S\u00e1nchez-Lengeling","orcid":"https://orcid.org/0000-0002-1116-1745"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]},{"id":"https://openalex.org/I4210127509","display_name":"Vector Institute","ror":"https://ror.org/03kqdja62","country_code":"CA","type":"facility","lineage":["https://openalex.org/I4210127509"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Benjamin Sanchez-Lengeling","raw_affiliation_strings":["Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Canada","Department of Chemistry, University of Toronto, Toronto, Canada","Vector Institute for Artificial Intelligence, Toronto, Canada"],"raw_orcid":"https://orcid.org/0000-0002-1116-1745","affiliations":[{"raw_affiliation_string":"Department of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Department of Chemistry, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"Vector Institute for Artificial Intelligence, Toronto, Canada","institution_ids":["https://openalex.org/I4210127509"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5065990295"],"corresponding_institution_ids":["https://openalex.org/I185261750","https://openalex.org/I4210127509"],"apc_list":{"value":3000,"currency":"USD","value_usd":3000},"apc_paid":{"value":3000,"currency":"USD","value_usd":3000},"fwci":1.4741,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.80169074,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":97},"biblio":{"volume":"6","issue":"3","first_page":"035063","last_page":"035063"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10971","display_name":"Olfactory and Sensory Function Studies","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2809","display_name":"Sensory Systems"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10971","display_name":"Olfactory and Sensory Function Studies","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/2809","display_name":"Sensory Systems"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11667","display_name":"Advanced Chemical Sensor Technologies","score":0.9746000170707703,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12321","display_name":"Insect Pheromone Research and Control","score":0.916100025177002,"subfield":{"id":"https://openalex.org/subfields/1109","display_name":"Insect Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/olfactory-perception","display_name":"Olfactory perception","score":0.7525771856307983},{"id":"https://openalex.org/keywords/olfaction","display_name":"Olfaction","score":0.5819289684295654},{"id":"https://openalex.org/keywords/olfactory-system","display_name":"Olfactory system","score":0.43335843086242676},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.4315416216850281},{"id":"https://openalex.org/keywords/communication","display_name":"Communication","score":0.3985369801521301},{"id":"https://openalex.org/keywords/cognitive-psychology","display_name":"Cognitive psychology","score":0.36270707845687866},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.350808322429657},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.30294162034988403}],"concepts":[{"id":"https://openalex.org/C2910791027","wikidata":"https://www.wikidata.org/wiki/Q1541064","display_name":"Olfactory perception","level":3,"score":0.7525771856307983},{"id":"https://openalex.org/C163214680","wikidata":"https://www.wikidata.org/wiki/Q1541064","display_name":"Olfaction","level":2,"score":0.5819289684295654},{"id":"https://openalex.org/C201792869","wikidata":"https://www.wikidata.org/wiki/Q1054094","display_name":"Olfactory system","level":2,"score":0.43335843086242676},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.4315416216850281},{"id":"https://openalex.org/C46312422","wikidata":"https://www.wikidata.org/wiki/Q11024","display_name":"Communication","level":1,"score":0.3985369801521301},{"id":"https://openalex.org/C180747234","wikidata":"https://www.wikidata.org/wiki/Q23373","display_name":"Cognitive psychology","level":1,"score":0.36270707845687866},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.350808322429657},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.30294162034988403}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1088/2632-2153/adfffc","is_oa":true,"landing_page_url":"https://doi.org/10.1088/2632-2153/adfffc","pdf_url":"https://iopscience.iop.org/article/10.1088/2632-2153/adfffc/pdf","source":{"id":"https://openalex.org/S4210200687","display_name":"Machine Learning Science and Technology","issn_l":"2632-2153","issn":["2632-2153"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320083","host_organization_name":"IOP Publishing","host_organization_lineage":["https://openalex.org/P4310320083","https://openalex.org/P4310311669"],"host_organization_lineage_names":["IOP Publishing","Institute of Physics"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Machine Learning: Science and Technology","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:d5a50dcb09c34b4dab6903aef92807d6","is_oa":true,"landing_page_url":"https://doaj.org/article/d5a50dcb09c34b4dab6903aef92807d6","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Machine Learning: Science and Technology, Vol 6, Iss 3, p 035063 (2025)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1088/2632-2153/adfffc","is_oa":true,"landing_page_url":"https://doi.org/10.1088/2632-2153/adfffc","pdf_url":"https://iopscience.iop.org/article/10.1088/2632-2153/adfffc/pdf","source":{"id":"https://openalex.org/S4210200687","display_name":"Machine Learning Science and Technology","issn_l":"2632-2153","issn":["2632-2153"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320083","host_organization_name":"IOP Publishing","host_organization_lineage":["https://openalex.org/P4310320083","https://openalex.org/P4310311669"],"host_organization_lineage_names":["IOP Publishing","Institute of Physics"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Machine Learning: Science and Technology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1955608536","display_name":null,"funder_award_id":"CFREF\u20102022\u201000042","funder_id":"https://openalex.org/F4320326644","funder_display_name":"Canada First Research Excellence Fund"},{"id":"https://openalex.org/G397280496","display_name":null,"funder_award_id":"2022-00042","funder_id":"https://openalex.org/F4320326644","funder_display_name":"Canada First Research Excellence Fund"},{"id":"https://openalex.org/G6168044780","display_name":null,"funder_award_id":"CFREF-2022-00042","funder_id":"https://openalex.org/F4320322015","funder_display_name":"University of Toronto"}],"funders":[{"id":"https://openalex.org/F4320314607","display_name":"Government of Ontario","ror":"https://ror.org/015pzp858"},{"id":"https://openalex.org/F4320321487","display_name":"Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"},{"id":"https://openalex.org/F4320322015","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087"},{"id":"https://openalex.org/F4320326644","display_name":"Canada First Research Excellence Fund","ror":null},{"id":"https://openalex.org/F4320330223","display_name":"Vector Institute","ror":"https://ror.org/03kqdja62"},{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4413778014.pdf","grobid_xml":"https://content.openalex.org/works/W4413778014.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4311116281","https://openalex.org/W2404244396","https://openalex.org/W4280609314","https://openalex.org/W2966060831","https://openalex.org/W185123636","https://openalex.org/W3014593842","https://openalex.org/W2171232551","https://openalex.org/W4233533802","https://openalex.org/W2017861824","https://openalex.org/W4239100969"],"abstract_inverted_index":{"Abstract":[0],"Olfaction\u2014how":[1],"molecules":[2],"are":[3,41],"perceived":[4],"as":[5],"odors":[6],"to":[7,16,28,57,77,121,148,180],"humans\u2014is":[8],"a":[9,66,95],"relatively":[10,54],"less":[11],"understood":[12],"sensory":[13],"system":[14],"compared":[15],"vision":[17],"or":[18],"hearing.":[19],"Recently,":[20],"the":[21,30,88,91,127,144,150,157,160,166,170,173,178,184],"principal":[22],"odor":[23],"map":[24],"(POM)":[25],"was":[26],"introduced":[27],"digitize":[29,181],"olfactory":[31,61,75,123,163],"properties":[32],"of":[33,49,70,82,90,143,146,152,159,172,186],"single":[34,44],"compounds.":[35],"However,":[36],"smells":[37],"in":[38,60,94,126,192,196],"real":[39],"life":[40],"not":[42],"pure":[43],"molecules,":[45,50],"but":[46],"complex":[47],"mixtures":[48],"whose":[51],"representations":[52,81,112,195],"remain":[53],"under-explored":[55],"due":[56],"limited":[58],"data":[59,76],"mixtures.":[62],"We":[63,138,155],"introduce":[64],"POMMix,":[65],"mixture":[67,80,114,128,194],"model":[68,85],"extension":[69],"POM":[71],"which":[72],"leverages":[73],"mono-molecular":[74,104],"build":[78],"meaningful":[79],"smells.":[83],"Our":[84,175],"builds":[86],"upon":[87],"symmetries":[89],"problem":[92],"space":[93],"hierarchical":[96],"manner:":[97],"(1)":[98],"graph":[99],"neural":[100],"networks":[101],"for":[102,109],"building":[103],"embeddings,":[105],"(2)":[106],"attention":[107],"mechanisms":[108],"aggregating":[110],"molecular":[111],"into":[113],"representations,":[115,167],"and":[116,168,189],"(3)":[117],"cosine":[118],"prediction":[119],"heads":[120],"encode":[122],"perceptual":[124],"distance":[125],"embedding":[129],"space.":[130],"POMMix":[131,147],"achieves":[132],"state-of-the-art":[133],"performance":[134],"across":[135],"multiple":[136],"datasets.":[137],"perform":[139],"comprehensive":[140],"ablation":[141],"studies":[142],"components":[145],"understand":[149],"contribution":[151],"each":[153],"component.":[154],"evaluate":[156],"generalizability":[158],"model,":[161],"explore":[162],"phenomena":[164],"with":[165],"analyze":[169],"interpretability":[171],"representations.":[174],"work":[176],"advances":[177],"effort":[179],"olfaction,":[182],"highlighting":[183],"synergy":[185],"domain":[187],"expertise":[188],"deep":[190],"learning":[191],"crafting":[193],"low-data":[197],"regimes.":[198]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
