{"id":"https://openalex.org/W2401736446","doi":"https://doi.org/10.1080/17445760.2016.1185521","title":"A computational model of planarian regeneration","display_name":"A computational model of planarian regeneration","publication_year":2016,"publication_date":"2016-05-24","ids":{"openalex":"https://openalex.org/W2401736446","doi":"https://doi.org/10.1080/17445760.2016.1185521","mag":"2401736446"},"language":"en","primary_location":{"id":"doi:10.1080/17445760.2016.1185521","is_oa":false,"landing_page_url":"https://doi.org/10.1080/17445760.2016.1185521","pdf_url":null,"source":{"id":"https://openalex.org/S85375271","display_name":"International Journal of Parallel Emergent and Distributed Systems","issn_l":"1744-5760","issn":["1744-5760","1744-5779"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547"],"host_organization_lineage_names":["Taylor & Francis"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Parallel, Emergent and Distributed Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082203989","display_name":"Abhishek De","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Abhishek De","raw_affiliation_strings":["Program in Neuroscience, University of Washington, Seattle, WA, USA"],"affiliations":[{"raw_affiliation_string":"Program in Neuroscience, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000521454","display_name":"V. Srinivasa Chakravarthy","orcid":"https://orcid.org/0000-0002-2453-1637"},"institutions":[{"id":"https://openalex.org/I24676775","display_name":"Indian Institute of Technology Madras","ror":"https://ror.org/03v0r5n49","country_code":"IN","type":"facility","lineage":["https://openalex.org/I24676775"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"V. Srinivasa Chakravarthy","raw_affiliation_strings":["Computational Neuroscience Laboratory, Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences, Indian Institute of Technology Madras, Chennai, India"],"affiliations":[{"raw_affiliation_string":"Computational Neuroscience Laboratory, Department of Biotechnology, Bhupat and Jyoti Mehta School of Biosciences, Indian Institute of Technology Madras, Chennai, India","institution_ids":["https://openalex.org/I24676775"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085228887","display_name":"Michael Levin","orcid":"https://orcid.org/0000-0001-7292-8084"},"institutions":[{"id":"https://openalex.org/I121934306","display_name":"Tufts University","ror":"https://ror.org/05wvpxv85","country_code":"US","type":"education","lineage":["https://openalex.org/I121934306"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Michael Levin","raw_affiliation_strings":["Biology Department, Allen Discovery Center at Tufts University, Medford, MA, USA"],"affiliations":[{"raw_affiliation_string":"Biology Department, Allen Discovery Center at Tufts University, Medford, MA, USA","institution_ids":["https://openalex.org/I121934306"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5085228887"],"corresponding_institution_ids":["https://openalex.org/I121934306"],"apc_list":null,"apc_paid":null,"fwci":1.1671,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.79304292,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"32","issue":"4","first_page":"331","last_page":"347"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12789","display_name":"Planarian Biology and Electrostimulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12789","display_name":"Planarian Biology and Electrostimulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12213","display_name":"Marine Ecology and Invasive Species","score":0.9860000014305115,"subfield":{"id":"https://openalex.org/subfields/2306","display_name":"Global and Planetary Change"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12813","display_name":"Plant and Biological Electrophysiology Studies","score":0.9833999872207642,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/planarian","display_name":"Planarian","score":0.9894199371337891},{"id":"https://openalex.org/keywords/regeneration","display_name":"Regeneration (biology)","score":0.8074734210968018},{"id":"https://openalex.org/keywords/model-organism","display_name":"Model organism","score":0.6618033051490784},{"id":"https://openalex.org/keywords/organism","display_name":"Organism","score":0.6606369018554688},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5490919351577759},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.4654439687728882},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.34074780344963074},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.2446410357952118},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08640804886817932},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.07349318265914917}],"concepts":[{"id":"https://openalex.org/C2775935104","wikidata":"https://www.wikidata.org/wiki/Q6502673","display_name":"Planarian","level":3,"score":0.9894199371337891},{"id":"https://openalex.org/C171056886","wikidata":"https://www.wikidata.org/wiki/Q193119","display_name":"Regeneration (biology)","level":2,"score":0.8074734210968018},{"id":"https://openalex.org/C19843653","wikidata":"https://www.wikidata.org/wiki/Q213907","display_name":"Model organism","level":3,"score":0.6618033051490784},{"id":"https://openalex.org/C137858568","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Organism","level":2,"score":0.6606369018554688},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5490919351577759},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.4654439687728882},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.34074780344963074},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.2446410357952118},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08640804886817932},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.07349318265914917},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1080/17445760.2016.1185521","is_oa":false,"landing_page_url":"https://doi.org/10.1080/17445760.2016.1185521","pdf_url":null,"source":{"id":"https://openalex.org/S85375271","display_name":"International Journal of Parallel Emergent and Distributed Systems","issn_l":"1744-5760","issn":["1744-5760","1744-5779"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547"],"host_organization_lineage_names":["Taylor & Francis"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Parallel, Emergent and Distributed Systems","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Life in Land","score":0.6000000238418579,"id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G5559050562","display_name":null,"funder_award_id":"TWCF0140","funder_id":"https://openalex.org/F4320327239","funder_display_name":"Templeton World Charity Foundation"},{"id":"https://openalex.org/G7038579","display_name":null,"funder_award_id":"TWCF0089/AB55","funder_id":"https://openalex.org/F4320327239","funder_display_name":"Templeton World Charity Foundation"}],"funders":[{"id":"https://openalex.org/F4320327239","display_name":"Templeton World Charity Foundation","ror":"https://ror.org/00x0z1472"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":40,"referenced_works":["https://openalex.org/W284492748","https://openalex.org/W1489213177","https://openalex.org/W1905290144","https://openalex.org/W1974276287","https://openalex.org/W1978789471","https://openalex.org/W1980661496","https://openalex.org/W1984937449","https://openalex.org/W1995892906","https://openalex.org/W1998131012","https://openalex.org/W2000690667","https://openalex.org/W2008127822","https://openalex.org/W2010769244","https://openalex.org/W2014173674","https://openalex.org/W2026641296","https://openalex.org/W2040870580","https://openalex.org/W2044979654","https://openalex.org/W2048672935","https://openalex.org/W2049959900","https://openalex.org/W2053232789","https://openalex.org/W2056052206","https://openalex.org/W2058632833","https://openalex.org/W2076499916","https://openalex.org/W2077512603","https://openalex.org/W2083298149","https://openalex.org/W2097273459","https://openalex.org/W2112246162","https://openalex.org/W2122458046","https://openalex.org/W2128409798","https://openalex.org/W2136399909","https://openalex.org/W2136602896","https://openalex.org/W2162932719","https://openalex.org/W2179863929","https://openalex.org/W2277165468","https://openalex.org/W2501684881","https://openalex.org/W2503746143","https://openalex.org/W4240131832","https://openalex.org/W4250039758","https://openalex.org/W4252218665","https://openalex.org/W4285719527","https://openalex.org/W4386434565"],"related_works":["https://openalex.org/W4386595023","https://openalex.org/W4235970525","https://openalex.org/W2049201889","https://openalex.org/W3140506149","https://openalex.org/W2376134633","https://openalex.org/W4285012813","https://openalex.org/W2343860250","https://openalex.org/W2336394022","https://openalex.org/W2144375779","https://openalex.org/W1530415409"],"abstract_inverted_index":{"Regeneration":[0],"of":[1,33,42,57,63,69,75,79,98,105,140,149],"complex":[2,11],"anatomical":[3],"structures":[4],"is":[5,21,72,93],"an":[6,80],"emergent":[7],"phenomenon":[8],"arising":[9],"from":[10,83],"interplay":[12,114],"between":[13,115],"various":[14],"underlying":[15],"cellular":[16,129],"components":[17],"and":[18,40,117],"processes.":[19],"It":[20],"still":[22],"largely":[23],"unclear":[24],"how":[25,150],"coordination":[26],"among":[27],"cells":[28,58],"leads":[29],"to":[30,47,85,87,95],"accurate":[31],"regeneration":[32,141],"the":[34,37,43,48,54,73,99,106,128,138,152],"organism,":[35],"preserving":[36],"location,":[38],"shape,":[39],"composition":[41],"parts":[44],"with":[45],"respect":[46],"whole.":[49],"Here,":[50],"we":[51,135],"examine":[52],"at":[53,131],"global":[55,88],"interaction":[56],"in":[59],"a":[60,112,123,143,147],"computational":[61,91],"model":[62,71,92],"planarian":[64],"regeneration.":[65],"A":[66],"key":[67],"feature":[68],"our":[70],"integration":[74],"multiple":[76],"organizational":[77],"levels":[78],"organism":[81,154],"\u2013":[82],"cells,":[84],"network,":[86],"shape.":[89,158],"The":[90],"able":[94],"replicate":[96],"most":[97],"experimental":[100],"observations":[101],"thereby":[102],"facilitating":[103],"study":[104],"putative":[107],"mechanisms.":[108],"We":[109],"observe":[110],"that":[111,126,145],"hierarchical":[113],"local":[116],"long":[118],"range":[119],"signaling":[120],"acts":[121],"as":[122],"positional":[124],"map":[125],"guides":[127],"fate":[130],"any":[132],"position.":[133],"Furthermore,":[134],"have":[136],"quantified":[137],"quality":[139],"using":[142],"metric":[144],"provides":[146],"sense":[148],"well":[151],"regenerated":[153],"resembles":[155],"its":[156],"original":[157]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
