{"id":"https://openalex.org/W4390053353","doi":"https://doi.org/10.1080/01969722.2023.2296250","title":"Learning Disentangled Representation for Chromosome Straightening","display_name":"Learning Disentangled Representation for Chromosome Straightening","publication_year":2023,"publication_date":"2023-12-21","ids":{"openalex":"https://openalex.org/W4390053353","doi":"https://doi.org/10.1080/01969722.2023.2296250"},"language":"en","primary_location":{"id":"doi:10.1080/01969722.2023.2296250","is_oa":false,"landing_page_url":"https://doi.org/10.1080/01969722.2023.2296250","pdf_url":null,"source":{"id":"https://openalex.org/S117436046","display_name":"Cybernetics & Systems","issn_l":"0196-9722","issn":["0196-9722","1087-6553"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547"],"host_organization_lineage_names":["Taylor & Francis"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Cybernetics and Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101521615","display_name":"Tao Liu","orcid":"https://orcid.org/0000-0003-1935-168X"},"institutions":[{"id":"https://openalex.org/I24201400","display_name":"Chengdu University of Information Technology","ror":"https://ror.org/01yxwrh59","country_code":"CN","type":"education","lineage":["https://openalex.org/I24201400"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Liu","raw_affiliation_strings":["School of Cybersecurity, Chengdu University of Information Technology","School of Cybersecurity, Chengdu University of Information Technology, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"School of Cybersecurity, Chengdu University of Information Technology","institution_ids":["https://openalex.org/I24201400"]},{"raw_affiliation_string":"School of Cybersecurity, Chengdu University of Information Technology, Chengdu, China","institution_ids":["https://openalex.org/I24201400"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101282761","display_name":"Yifeng Peng","orcid":null},"institutions":[{"id":"https://openalex.org/I24201400","display_name":"Chengdu University of Information Technology","ror":"https://ror.org/01yxwrh59","country_code":"CN","type":"education","lineage":["https://openalex.org/I24201400"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yifeng Peng","raw_affiliation_strings":["School of Cybersecurity, Chengdu University of Information Technology","School of Cybersecurity, Chengdu University of Information Technology, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"School of Cybersecurity, Chengdu University of Information Technology","institution_ids":["https://openalex.org/I24201400"]},{"raw_affiliation_string":"School of Cybersecurity, Chengdu University of Information Technology, Chengdu, China","institution_ids":["https://openalex.org/I24201400"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100400806","display_name":"Ran Chen","orcid":"https://orcid.org/0000-0002-8967-7258"},"institutions":[{"id":"https://openalex.org/I24201400","display_name":"Chengdu University of Information Technology","ror":"https://ror.org/01yxwrh59","country_code":"CN","type":"education","lineage":["https://openalex.org/I24201400"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ran Chen","raw_affiliation_strings":["School of Cybersecurity, Chengdu University of Information Technology","School of Cybersecurity, Chengdu University of Information Technology, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"School of Cybersecurity, Chengdu University of Information Technology","institution_ids":["https://openalex.org/I24201400"]},{"raw_affiliation_string":"School of Cybersecurity, Chengdu University of Information Technology, Chengdu, China","institution_ids":["https://openalex.org/I24201400"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005984834","display_name":"Yi Ling Lai","orcid":"https://orcid.org/0000-0003-4412-2707"},"institutions":[{"id":"https://openalex.org/I4210089228","display_name":"West China Second University Hospital of Sichuan University","ror":"https://ror.org/00726et14","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210089228"]},{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yi Lai","raw_affiliation_strings":["Department of Medical Genetics/Prenatal Diagnostic Center, West China Second Hospital, Sichuan University","Department of Medical Genetics/Prenatal Diagnostic Center, West China Second Hospital, Sichuan University, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Department of Medical Genetics/Prenatal Diagnostic Center, West China Second Hospital, Sichuan University","institution_ids":["https://openalex.org/I24185976","https://openalex.org/I4210089228"]},{"raw_affiliation_string":"Department of Medical Genetics/Prenatal Diagnostic Center, West China Second Hospital, Sichuan University, Chengdu, China","institution_ids":["https://openalex.org/I24185976","https://openalex.org/I4210089228"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036359181","display_name":"Haoxi Zhang","orcid":"https://orcid.org/0000-0002-1341-1912"},"institutions":[{"id":"https://openalex.org/I24201400","display_name":"Chengdu University of Information Technology","ror":"https://ror.org/01yxwrh59","country_code":"CN","type":"education","lineage":["https://openalex.org/I24201400"]},{"id":"https://openalex.org/I4210132990","display_name":"State Key Laboratory of Cryptology","ror":"https://ror.org/02pn5rj08","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210132990"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Haoxi Zhang","raw_affiliation_strings":["Advanced Cryptography and System Security Key Laboratory of Sichuan Province","School of Cybersecurity, Chengdu University of Information Technology","School of Cybersecurity, Chengdu University of Information Technology, Chengdu, China","Advanced Cryptography and System Security Key Laboratory of Sichuan Province, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Advanced Cryptography and System Security Key Laboratory of Sichuan Province","institution_ids":["https://openalex.org/I4210132990"]},{"raw_affiliation_string":"School of Cybersecurity, Chengdu University of Information Technology","institution_ids":["https://openalex.org/I24201400"]},{"raw_affiliation_string":"School of Cybersecurity, Chengdu University of Information Technology, Chengdu, China","institution_ids":["https://openalex.org/I24201400"]},{"raw_affiliation_string":"Advanced Cryptography and System Security Key Laboratory of Sichuan Province, Chengdu, China","institution_ids":["https://openalex.org/I4210132990"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014052399","display_name":"Edward Szczerbicki","orcid":"https://orcid.org/0000-0001-7794-2862"},"institutions":[{"id":"https://openalex.org/I169333911","display_name":"Gda\u0144sk University of Technology","ror":"https://ror.org/006x4sc24","country_code":"PL","type":"education","lineage":["https://openalex.org/I169333911"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Edward Szczerbicki","raw_affiliation_strings":["Faculty of Management and Economics, Gdansk University of Technology","Faculty of Management and Economics, Gdansk University of Technology, Gdansk, Poland"],"affiliations":[{"raw_affiliation_string":"Faculty of Management and Economics, Gdansk University of Technology","institution_ids":["https://openalex.org/I169333911"]},{"raw_affiliation_string":"Faculty of Management and Economics, Gdansk University of Technology, Gdansk, Poland","institution_ids":["https://openalex.org/I169333911"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5036359181"],"corresponding_institution_ids":["https://openalex.org/I24201400","https://openalex.org/I4210132990"],"apc_list":null,"apc_paid":null,"fwci":0.3211,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.73293652,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"56","issue":"8","first_page":"1222","last_page":"1231"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9728000164031982,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.8715559244155884},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.7123481035232544},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.6516309380531311},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6472501158714294},{"id":"https://openalex.org/keywords/encoder","display_name":"Encoder","score":0.571940541267395},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5133592486381531},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4960096776485443},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.48436006903648376},{"id":"https://openalex.org/keywords/feature-learning","display_name":"Feature learning","score":0.480728417634964},{"id":"https://openalex.org/keywords/generator","display_name":"Generator (circuit theory)","score":0.4521512985229492},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4342251121997833},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.4262644648551941},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.304527223110199},{"id":"https://openalex.org/keywords/power","display_name":"Power (physics)","score":0.10340410470962524},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.06530827283859253}],"concepts":[{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.8715559244155884},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.7123481035232544},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.6516309380531311},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6472501158714294},{"id":"https://openalex.org/C118505674","wikidata":"https://www.wikidata.org/wiki/Q42586063","display_name":"Encoder","level":2,"score":0.571940541267395},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5133592486381531},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4960096776485443},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.48436006903648376},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.480728417634964},{"id":"https://openalex.org/C2780992000","wikidata":"https://www.wikidata.org/wiki/Q17016113","display_name":"Generator (circuit theory)","level":3,"score":0.4521512985229492},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4342251121997833},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.4262644648551941},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.304527223110199},{"id":"https://openalex.org/C163258240","wikidata":"https://www.wikidata.org/wiki/Q25342","display_name":"Power (physics)","level":2,"score":0.10340410470962524},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.06530827283859253},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1080/01969722.2023.2296250","is_oa":false,"landing_page_url":"https://doi.org/10.1080/01969722.2023.2296250","pdf_url":null,"source":{"id":"https://openalex.org/S117436046","display_name":"Cybernetics & Systems","issn_l":"0196-9722","issn":["0196-9722","1087-6553"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547"],"host_organization_lineage_names":["Taylor & Francis"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Cybernetics and Systems","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/1","score":0.7900000214576721,"display_name":"No poverty"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1583837637","https://openalex.org/W2003790129","https://openalex.org/W2012031796","https://openalex.org/W2078637082","https://openalex.org/W2134871593","https://openalex.org/W2434741482","https://openalex.org/W2548275288","https://openalex.org/W2794198923","https://openalex.org/W2796704765","https://openalex.org/W2912500072","https://openalex.org/W2913059114","https://openalex.org/W2920347438","https://openalex.org/W2951523806","https://openalex.org/W3134649899","https://openalex.org/W3135174958","https://openalex.org/W3200760517","https://openalex.org/W4283820236"],"related_works":["https://openalex.org/W4390516098","https://openalex.org/W2371138613","https://openalex.org/W2048963458","https://openalex.org/W43109613","https://openalex.org/W2359952343","https://openalex.org/W2181948922","https://openalex.org/W2080152487","https://openalex.org/W2384362569","https://openalex.org/W2239445980","https://openalex.org/W2995553446"],"abstract_inverted_index":{"Chromosome":[0],"straightening":[1,10,48,132],"plays":[2],"an":[3],"important":[4],"role":[5],"in":[6,24,30,84],"karyotype":[7],"analysis.":[8],"Common":[9],"methods":[11],"usually":[12],"adopt":[13],"geometric":[14],"algorithms,":[15],"which":[16],"tend":[17],"to":[18,92],"affect":[19],"the":[20,25,62,68,77,81,85,94,100,104,108,117,122,127,144,150],"chromosome":[21,96,133],"banding":[22,137],"patterns":[23,138],"process":[26],"of":[27,34,58],"straightening,":[28],"resulting":[29],"feature":[31],"changes,":[32],"loss":[33],"details,":[35],"and":[36,67,75,80,107,149],"poor":[37],"generalization.":[38],"To":[39],"solve":[40],"these":[41],"problems,":[42],"this":[43],"paper":[44],"proposes":[45],"a":[46],"novel":[47],"method":[49,56,115,159],"based":[50,98],"on":[51,99,142],"disentanglement":[52],"representation":[53,79,83,106,110,119,124,129],"learning.":[54],"Our":[55],"consists":[57],"two":[59],"main":[60],"components:":[61],"Disentanglement":[63],"Representation":[64],"Encoder":[65],"(DRE)":[66],"Straightening":[69],"Generator":[70],"(SG),":[71],"where":[72],"DRE":[73],"discovers":[74],"disentangles":[76],"bent":[78,105,123],"content":[82,109,128],"latent":[86],"space,":[87],"while":[88,125],"SG":[89],"is":[90],"used":[91],"generate":[93],"straightened":[95,118],"images":[97],"disentangled":[101,111],"representations.":[102],"Leveraging":[103],"by":[112,120],"DRE,":[113],"our":[114,158],"produces":[116],"reducing":[121],"keeping":[126],"unchanged,":[130],"making":[131],"without":[134],"changing":[135],"its":[136],"possible.":[139],"Evaluation":[140],"results":[141],"both":[143],"Frechet":[145],"Initiation":[146],"Distance":[147],"(FID)":[148],"Downstream":[151],"Classification":[152],"Accuracy":[153],"(DCA)":[154],"metrics":[155],"show":[156],"that":[157],"achieves":[160],"good":[161],"performance.":[162]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
