{"id":"https://openalex.org/W1967233669","doi":"https://doi.org/10.1080/00207720903144560","title":"Stationary and structural control in gene regulatory networks: basic concepts","display_name":"Stationary and structural control in gene regulatory networks: basic concepts","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W1967233669","doi":"https://doi.org/10.1080/00207720903144560","mag":"1967233669"},"language":"en","primary_location":{"id":"doi:10.1080/00207720903144560","is_oa":false,"landing_page_url":"https://doi.org/10.1080/00207720903144560","pdf_url":null,"source":{"id":"https://openalex.org/S129640837","display_name":"International Journal of Systems Science","issn_l":"0020-7721","issn":["0020-7721","1464-5319"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547"],"host_organization_lineage_names":["Taylor & Francis"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Systems Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5112221423","display_name":"Edward R. Dougherty","orcid":null},"institutions":[{"id":"https://openalex.org/I1284308235","display_name":"Translational Genomics Research Institute","ror":"https://ror.org/02hfpnk21","country_code":"US","type":"facility","lineage":["https://openalex.org/I1284308235"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Edward R. Dougherty","raw_affiliation_strings":["Department of Electrical and Computer Engineering , Texas A&M University, College Station, TX, 77843, USA ; Computational Biology Division , Translational Genomics Research Institude , Phoenix, AZ, 85004, USA","Department of Electrical and Computer Engineering, Texas A&M University,, College Station, TX, 77843, USA,Computational Biology Division, Translational Genomics Research Institude, Phoenix, AZ ...#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering , Texas A&M University, College Station, TX, 77843, USA ; Computational Biology Division , Translational Genomics Research Institude , Phoenix, AZ, 85004, USA","institution_ids":["https://openalex.org/I1284308235"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Texas A&M University,, College Station, TX, 77843, USA,Computational Biology Division, Translational Genomics Research Institude, Phoenix, AZ ...#TAB#","institution_ids":["https://openalex.org/I1284308235","https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025450455","display_name":"Ranadip Pal","orcid":"https://orcid.org/0000-0002-9311-5901"},"institutions":[{"id":"https://openalex.org/I12315562","display_name":"Texas Tech University","ror":"https://ror.org/0405mnx93","country_code":"US","type":"education","lineage":["https://openalex.org/I12315562"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ranadip Pal","raw_affiliation_strings":["Department of Electrical and Computer Engineering , Texas Tech. University , Lubbock, TX, 79409, USA","Department of Electrical and Computer Engineering, Texas Tech University, Lubbock, TX, 79409, USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering , Texas Tech. University , Lubbock, TX, 79409, USA","institution_ids":["https://openalex.org/I12315562"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Texas Tech University, Lubbock, TX, 79409, USA","institution_ids":["https://openalex.org/I12315562"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073946580","display_name":"Xiaoning Qian","orcid":"https://orcid.org/0000-0002-4347-2476"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaoning Qian","raw_affiliation_strings":["Department of Electrical and Computer Engineering, The Department of Statistics , Texas A&M University College Station , TX, 77843, USA","Department of Electrical and Computer Engineering, The Department of Statistics, Texas A&M University College Station, TX, 77843, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, The Department of Statistics , Texas A&M University College Station , TX, 77843, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, The Department of Statistics, Texas A&M University College Station, TX, 77843, USA#TAB#","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007353982","display_name":"Michael Bittner","orcid":"https://orcid.org/0000-0003-4293-930X"},"institutions":[{"id":"https://openalex.org/I1284308235","display_name":"Translational Genomics Research Institute","ror":"https://ror.org/02hfpnk21","country_code":"US","type":"facility","lineage":["https://openalex.org/I1284308235"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael L. Bittner","raw_affiliation_strings":["Computational Biology Division , Translational Genomics Research Institude , Phoenix, AZ, 85004, USA","Computational Biology Division, Translational Genomics Research Institude, Phoenix, AZ, 85004, USA#TAB#"],"affiliations":[{"raw_affiliation_string":"Computational Biology Division , Translational Genomics Research Institude , Phoenix, AZ, 85004, USA","institution_ids":["https://openalex.org/I1284308235"]},{"raw_affiliation_string":"Computational Biology Division, Translational Genomics Research Institude, Phoenix, AZ, 85004, USA#TAB#","institution_ids":["https://openalex.org/I1284308235"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045462352","display_name":"Aniruddha Datta","orcid":"https://orcid.org/0000-0003-1213-3807"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aniruddha Datta","raw_affiliation_strings":["Department of Electrical and Computer Engineering , Texas A&M University, College Station, TX, 77843, USA","Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering , Texas A&M University, College Station, TX, 77843, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5112221423"],"corresponding_institution_ids":["https://openalex.org/I1284308235","https://openalex.org/I91045830"],"apc_list":null,"apc_paid":null,"fwci":1.9826,"has_fulltext":false,"cited_by_count":41,"citation_normalized_percentile":{"value":0.85337852,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"41","issue":"1","first_page":"5","last_page":"16"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.5454696416854858},{"id":"https://openalex.org/keywords/control","display_name":"Control (management)","score":0.5399731397628784},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4189406633377075},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4130493402481079},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.39126694202423096},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3436920642852783},{"id":"https://openalex.org/keywords/control-engineering","display_name":"Control engineering","score":0.3363085389137268},{"id":"https://openalex.org/keywords/control-theory","display_name":"Control theory (sociology)","score":0.3236694037914276},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2890429198741913},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.2571656107902527},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21471667289733887},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.18422555923461914}],"concepts":[{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.5454696416854858},{"id":"https://openalex.org/C2775924081","wikidata":"https://www.wikidata.org/wiki/Q55608371","display_name":"Control (management)","level":2,"score":0.5399731397628784},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4189406633377075},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4130493402481079},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.39126694202423096},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3436920642852783},{"id":"https://openalex.org/C133731056","wikidata":"https://www.wikidata.org/wiki/Q4917288","display_name":"Control engineering","level":1,"score":0.3363085389137268},{"id":"https://openalex.org/C47446073","wikidata":"https://www.wikidata.org/wiki/Q5165890","display_name":"Control theory (sociology)","level":3,"score":0.3236694037914276},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2890429198741913},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.2571656107902527},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21471667289733887},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.18422555923461914}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1080/00207720903144560","is_oa":false,"landing_page_url":"https://doi.org/10.1080/00207720903144560","pdf_url":null,"source":{"id":"https://openalex.org/S129640837","display_name":"International Journal of Systems Science","issn_l":"0020-7721","issn":["0020-7721","1464-5319"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547"],"host_organization_lineage_names":["Taylor & Francis"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Systems Science","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.47999998927116394}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":53,"referenced_works":["https://openalex.org/W270103414","https://openalex.org/W629739200","https://openalex.org/W1510564490","https://openalex.org/W1532781952","https://openalex.org/W1544193923","https://openalex.org/W1651215666","https://openalex.org/W1971224531","https://openalex.org/W1975766849","https://openalex.org/W1983161979","https://openalex.org/W2001489471","https://openalex.org/W2023186669","https://openalex.org/W2034774646","https://openalex.org/W2051591256","https://openalex.org/W2056787380","https://openalex.org/W2075379212","https://openalex.org/W2077350721","https://openalex.org/W2077895748","https://openalex.org/W2084757087","https://openalex.org/W2086150890","https://openalex.org/W2090882632","https://openalex.org/W2097847538","https://openalex.org/W2098432798","https://openalex.org/W2105291362","https://openalex.org/W2107663155","https://openalex.org/W2107913019","https://openalex.org/W2113169045","https://openalex.org/W2118467699","https://openalex.org/W2128530074","https://openalex.org/W2129123426","https://openalex.org/W2129842602","https://openalex.org/W2130721915","https://openalex.org/W2131441237","https://openalex.org/W2131754626","https://openalex.org/W2132775962","https://openalex.org/W2133851381","https://openalex.org/W2137324353","https://openalex.org/W2152563826","https://openalex.org/W2159638256","https://openalex.org/W2159717709","https://openalex.org/W2160220288","https://openalex.org/W2160533336","https://openalex.org/W2160573846","https://openalex.org/W2160904474","https://openalex.org/W2163310451","https://openalex.org/W2165350808","https://openalex.org/W2168399023","https://openalex.org/W2323009482","https://openalex.org/W4200346838","https://openalex.org/W4245479598","https://openalex.org/W4245929783","https://openalex.org/W4300639284","https://openalex.org/W4301337366","https://openalex.org/W4388252848"],"related_works":["https://openalex.org/W183875134","https://openalex.org/W4225426244","https://openalex.org/W1547016179","https://openalex.org/W2029617325","https://openalex.org/W2909382709","https://openalex.org/W2802217527","https://openalex.org/W2548423198","https://openalex.org/W2071094417","https://openalex.org/W4210625724","https://openalex.org/W3135711742"],"abstract_inverted_index":{"A":[0],"major":[1],"reason":[2],"for":[3,14,47,113],"constructing":[4],"gene":[5,48,65,114],"regulatory":[6],"networks":[7],"is":[8,55],"to":[9,32,70,88,126],"use":[10],"them":[11,125],"as":[12,31],"models":[13],"determining":[15],"therapeutic":[16],"intervention":[17,77,98,122,134],"strategies":[18],"by":[19],"deriving":[20],"ways":[21],"of":[22,36,62,83,94,107,121,131],"altering":[23,59],"their":[24],"long-run":[25,92],"dynamics":[26],"in":[27,135],"such":[28],"a":[29,63,136],"way":[30],"reduce":[33],"the":[34,60,84,91,95,105,108,128],"likelihood":[35],"entering":[37],"undesirable":[38],"states.":[39],"In":[40],"general,":[41],"two":[42],"paradigms":[43],"have":[44,100],"been":[45,102],"taken":[46],"network":[49,72,85,111],"intervention:":[50],"(1)":[51],"stationary":[52],"external":[53],"control":[54,64],"based":[56],"on":[57],"optimally":[58],"status":[61],"(or":[66],"genes)":[67],"over":[68],"time":[69],"drive":[71],"dynamics;":[73],"and":[74,123],"(2)":[75],"structural":[76],"involves":[78],"an":[79],"optimal":[80],"one-time":[81],"change":[82],"structure":[86],"(wiring)":[87],"beneficially":[89],"alter":[90],"behaviour":[93],"network.":[96,138],"These":[97],"approaches":[99],"mainly":[101],"developed":[103],"within":[104],"context":[106],"probabilistic":[109],"Boolean":[110],"model":[112],"regulation.":[115],"This":[116],"article":[117],"reviews":[118],"both":[119],"types":[120],"applies":[124],"reducing":[127],"metastatic":[129],"competence":[130],"cells":[132],"via":[133],"melanoma-related":[137]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
