{"id":"https://openalex.org/W2144247733","doi":"https://doi.org/10.1080/00207720500382266","title":"Gene sequence data sets analysed using a hierarchical neural clusterer","display_name":"Gene sequence data sets analysed using a hierarchical neural clusterer","publication_year":2005,"publication_date":"2005-11-15","ids":{"openalex":"https://openalex.org/W2144247733","doi":"https://doi.org/10.1080/00207720500382266","mag":"2144247733"},"language":"en","primary_location":{"id":"doi:10.1080/00207720500382266","is_oa":false,"landing_page_url":"https://doi.org/10.1080/00207720500382266","pdf_url":null,"source":{"id":"https://openalex.org/S129640837","display_name":"International Journal of Systems Science","issn_l":"0020-7721","issn":["0020-7721","1464-5319"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547"],"host_organization_lineage_names":["Taylor & Francis"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Systems Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110294286","display_name":"Rod Adams","orcid":null},"institutions":[{"id":"https://openalex.org/I141584323","display_name":"University of Hertfordshire","ror":"https://ror.org/0267vjk41","country_code":"GB","type":"education","lineage":["https://openalex.org/I141584323"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Rod Adams","raw_affiliation_strings":["Science and Technology Research Institute , University of Hertfordshire , Hatfield, Herts, AL10 9AB, UK","Science and Technology Research Institute, University of Hertfordshire, Hatfield, Herts AL10 9AB, UK"],"affiliations":[{"raw_affiliation_string":"Science and Technology Research Institute , University of Hertfordshire , Hatfield, Herts, AL10 9AB, UK","institution_ids":["https://openalex.org/I141584323"]},{"raw_affiliation_string":"Science and Technology Research Institute, University of Hertfordshire, Hatfield, Herts AL10 9AB, UK","institution_ids":["https://openalex.org/I141584323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105453354","display_name":"Neil Davey","orcid":null},"institutions":[{"id":"https://openalex.org/I141584323","display_name":"University of Hertfordshire","ror":"https://ror.org/0267vjk41","country_code":"GB","type":"education","lineage":["https://openalex.org/I141584323"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Neil Davey","raw_affiliation_strings":["Science and Technology Research Institute , University of Hertfordshire , Hatfield, Herts, AL10 9AB, UK","Science and Technology Research Institute, University of Hertfordshire, Hatfield, Herts AL10 9AB, UK"],"affiliations":[{"raw_affiliation_string":"Science and Technology Research Institute , University of Hertfordshire , Hatfield, Herts, AL10 9AB, UK","institution_ids":["https://openalex.org/I141584323"]},{"raw_affiliation_string":"Science and Technology Research Institute, University of Hertfordshire, Hatfield, Herts AL10 9AB, UK","institution_ids":["https://openalex.org/I141584323"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026510628","display_name":"Paul H. Kaye","orcid":"https://orcid.org/0000-0001-6950-4870"},"institutions":[{"id":"https://openalex.org/I141584323","display_name":"University of Hertfordshire","ror":"https://ror.org/0267vjk41","country_code":"GB","type":"education","lineage":["https://openalex.org/I141584323"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Paul Kaye","raw_affiliation_strings":["Science and Technology Research Institute , University of Hertfordshire , Hatfield, Herts, AL10 9AB, UK","Science and Technology Research Institute, University of Hertfordshire, Hatfield, Herts AL10 9AB, UK"],"affiliations":[{"raw_affiliation_string":"Science and Technology Research Institute , University of Hertfordshire , Hatfield, Herts, AL10 9AB, UK","institution_ids":["https://openalex.org/I141584323"]},{"raw_affiliation_string":"Science and Technology Research Institute, University of Hertfordshire, Hatfield, Herts AL10 9AB, UK","institution_ids":["https://openalex.org/I141584323"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081406777","display_name":"W. Pensuwon","orcid":null},"institutions":[{"id":"https://openalex.org/I179193067","display_name":"Khon Kaen University","ror":"https://ror.org/03cq4gr50","country_code":"TH","type":"education","lineage":["https://openalex.org/I179193067"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Wanida Pensuwon","raw_affiliation_strings":["Department of Computer Engineering, Faculty of Engineering , Khon Kaen University , Thailand","Department of Computer Engineering, Faculty of Engineering, Khon Kaen University, Thailand"],"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering, Faculty of Engineering , Khon Kaen University , Thailand","institution_ids":["https://openalex.org/I179193067"]},{"raw_affiliation_string":"Department of Computer Engineering, Faculty of Engineering, Khon Kaen University, Thailand","institution_ids":["https://openalex.org/I179193067"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5110294286"],"corresponding_institution_ids":["https://openalex.org/I141584323"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.15326953,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"36","issue":"14","first_page":"877","last_page":"885"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11975","display_name":"Evolutionary Algorithms and Applications","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10320","display_name":"Neural Networks and Applications","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6606217622756958},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.6318824887275696},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6237549781799316},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.6024670600891113},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5560725927352905},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.5345218777656555},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4968614876270294},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41657134890556335},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.38000598549842834},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.25519388914108276},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20728197693824768},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13720113039016724}],"concepts":[{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6606217622756958},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.6318824887275696},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6237549781799316},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.6024670600891113},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5560725927352905},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.5345218777656555},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4968614876270294},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41657134890556335},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.38000598549842834},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.25519388914108276},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20728197693824768},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13720113039016724},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1080/00207720500382266","is_oa":false,"landing_page_url":"https://doi.org/10.1080/00207720500382266","pdf_url":null,"source":{"id":"https://openalex.org/S129640837","display_name":"International Journal of Systems Science","issn_l":"0020-7721","issn":["0020-7721","1464-5319"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547"],"host_organization_lineage_names":["Taylor & Francis"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Systems Science","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.59.3727","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.59.3727","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://homepages.feis.herts.ac.uk/~nngroup/pubs/papers/Adams-IJSS05.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W98056105","https://openalex.org/W1494947421","https://openalex.org/W1517747898","https://openalex.org/W1764750548","https://openalex.org/W2027409595","https://openalex.org/W2082736011","https://openalex.org/W2124290836","https://openalex.org/W2128053817","https://openalex.org/W2133671888","https://openalex.org/W2155625967","https://openalex.org/W4214871172","https://openalex.org/W4239403073"],"related_works":["https://openalex.org/W2391251536","https://openalex.org/W2362198218","https://openalex.org/W1982750869","https://openalex.org/W2019521278","https://openalex.org/W1984922432","https://openalex.org/W2375008505","https://openalex.org/W2086348228","https://openalex.org/W2350679292","https://openalex.org/W2113077220","https://openalex.org/W2594414941"],"abstract_inverted_index":{"Evolutionary":[0],"algorithms":[1],"have":[2],"been":[3],"used":[4],"to":[5,27,31,93,115],"optimise":[6],"the":[7,52,55,59,82,86,94,109,112,126],"performance":[8],"of":[9,54,62,78,111,128],"neural":[10],"network":[11],"models":[12],"before.":[13],"This":[14],"paper":[15],"uses":[16],"a":[17,23,28,48,63,72],"hybrid":[18],"approach":[19],"by":[20,70],"permanently":[21],"attaching":[22],"genetic":[24],"algorithm":[25],"(GA)":[26],"hierarchical":[29],"clusterer":[30],"investigate":[32],"appropriate":[33],"parameter":[34],"values":[35],"for":[36,41],"producing":[37],"specific":[38],"tree-shaped":[39],"representations":[40],"some":[42],"gene":[43,106],"sequence":[44],"data.":[45],"It":[46],"addresses":[47],"particular":[49],"problem":[50],"where":[51],"size":[53],"data":[56,73,98,101],"set":[57,74],"makes":[58],"direct":[60],"use":[61],"GA":[64,83],"too":[65],"time":[66],"consuming.":[67],"We":[68],"show":[69],"using":[71],"nearly":[75],"two":[76],"orders":[77],"magnitude":[79],"smaller":[80],"in":[81,103],"investigation":[84],"that":[85,119,124],"results":[87],"can":[88],"be":[89],"usefully":[90],"translated":[91],"across":[92],"real,":[95],"much":[96],"larger":[97],"sets.":[99],"The":[100],"sets":[102],"question":[104],"are":[105],"sequences":[107],"and":[108],"aim":[110],"analysis":[113],"was":[114],"cluster":[116],"short":[117],"sub-sequences":[118],"could":[120],"represent":[121],"binding":[122],"sites":[123],"regulate":[125],"expression":[127],"genes.":[129]},"counts_by_year":[],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}