{"id":"https://openalex.org/W2042821342","doi":"https://doi.org/10.1080/00207160214653","title":"A Heuristic For Computing Repeats With A Factor Oracle: Application To Biological Sequences","display_name":"A Heuristic For Computing Repeats With A Factor Oracle: Application To Biological Sequences","publication_year":2002,"publication_date":"2002-01-01","ids":{"openalex":"https://openalex.org/W2042821342","doi":"https://doi.org/10.1080/00207160214653","mag":"2042821342"},"language":"en","primary_location":{"id":"doi:10.1080/00207160214653","is_oa":false,"landing_page_url":"https://doi.org/10.1080/00207160214653","pdf_url":null,"source":{"id":"https://openalex.org/S124867444","display_name":"International Journal of Computer Mathematics","issn_l":"0020-7160","issn":["0020-7160","1026-7425","1029-0265"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547"],"host_organization_lineage_names":["Taylor & Francis"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Mathematics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066757544","display_name":"Arnaud Lefebvre","orcid":"https://orcid.org/0000-0001-9631-2292"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I62396329","display_name":"Universit\u00e9 de Rouen Normandie","ror":"https://ror.org/03nhjew95","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210105918","https://openalex.org/I62396329"]},{"id":"https://openalex.org/I88814501","display_name":"Institut National des Sciences Appliqu\u00e9es Rouen Normandie","ror":"https://ror.org/020ws7586","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210105918","https://openalex.org/I88814501"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Arnaud Lefebvre","raw_affiliation_strings":["\n ESA CNRS 6037-ABISS, Faculte\u00b4 des Sciences, Universite\u00b4 de Rouen, Mont-Saint-Aignan Cedex, 76821, France","ESA CNRS 6037-ABISS, Faculte\u00b4 des Sciences , Universite\u00b4 de Rouen , Mont-Saint-Aignan Cedex, 76821, France"],"affiliations":[{"raw_affiliation_string":"\n ESA CNRS 6037-ABISS, Faculte\u00b4 des Sciences, Universite\u00b4 de Rouen, Mont-Saint-Aignan Cedex, 76821, France","institution_ids":["https://openalex.org/I62396329","https://openalex.org/I88814501","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"ESA CNRS 6037-ABISS, Faculte\u00b4 des Sciences , Universite\u00b4 de Rouen , Mont-Saint-Aignan Cedex, 76821, France","institution_ids":["https://openalex.org/I62396329","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052475314","display_name":"Thierry Lecroq","orcid":"https://orcid.org/0000-0002-1900-3397"},"institutions":[{"id":"https://openalex.org/I62396329","display_name":"Universit\u00e9 de Rouen Normandie","ror":"https://ror.org/03nhjew95","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210105918","https://openalex.org/I62396329"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Thierry Lecroq","raw_affiliation_strings":["\n LIFAR-ABISS, Faculte\u00b4 des Sciences, Universite\u00b4 de Rouen, Mont-Saint-Aignan Cedex, 76821, France","LIFAR-ABISS, Faculte\u00b4 des Sciences , Universite\u00b4 de Rouen , Mont-Saint-Aignan Cedex, 76821, France"],"affiliations":[{"raw_affiliation_string":"\n LIFAR-ABISS, Faculte\u00b4 des Sciences, Universite\u00b4 de Rouen, Mont-Saint-Aignan Cedex, 76821, France","institution_ids":["https://openalex.org/I62396329"]},{"raw_affiliation_string":"LIFAR-ABISS, Faculte\u00b4 des Sciences , Universite\u00b4 de Rouen , Mont-Saint-Aignan Cedex, 76821, France","institution_ids":["https://openalex.org/I62396329"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5066757544"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I62396329","https://openalex.org/I88814501"],"apc_list":null,"apc_paid":null,"fwci":0.8338,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.76626253,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"79","issue":"12","first_page":"1303","last_page":"1315"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11567","display_name":"semigroups and automata theory","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9927999973297119,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/suffix","display_name":"Suffix","score":0.8689337968826294},{"id":"https://openalex.org/keywords/prefix","display_name":"Prefix","score":0.8209282159805298},{"id":"https://openalex.org/keywords/oracle","display_name":"Oracle","score":0.8052568435668945},{"id":"https://openalex.org/keywords/factor","display_name":"Factor (programming language)","score":0.675247848033905},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.6331588625907898},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.6317380666732788},{"id":"https://openalex.org/keywords/word","display_name":"Word (group theory)","score":0.571829617023468},{"id":"https://openalex.org/keywords/suffix-tree","display_name":"Suffix tree","score":0.5553452968597412},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.5351302027702332},{"id":"https://openalex.org/keywords/suffix-array","display_name":"Suffix array","score":0.5151549577713013},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.45406338572502136},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.4492751359939575},{"id":"https://openalex.org/keywords/compressed-suffix-array","display_name":"Compressed suffix array","score":0.44395917654037476},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.38509732484817505},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.360923171043396},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.16269975900650024}],"concepts":[{"id":"https://openalex.org/C2779804580","wikidata":"https://www.wikidata.org/wiki/Q102047","display_name":"Suffix","level":2,"score":0.8689337968826294},{"id":"https://openalex.org/C141603448","wikidata":"https://www.wikidata.org/wiki/Q134830","display_name":"Prefix","level":2,"score":0.8209282159805298},{"id":"https://openalex.org/C55166926","wikidata":"https://www.wikidata.org/wiki/Q2892946","display_name":"Oracle","level":2,"score":0.8052568435668945},{"id":"https://openalex.org/C2781039887","wikidata":"https://www.wikidata.org/wiki/Q1391724","display_name":"Factor (programming language)","level":2,"score":0.675247848033905},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.6331588625907898},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.6317380666732788},{"id":"https://openalex.org/C90805587","wikidata":"https://www.wikidata.org/wiki/Q10944557","display_name":"Word (group theory)","level":2,"score":0.571829617023468},{"id":"https://openalex.org/C2781166958","wikidata":"https://www.wikidata.org/wiki/Q1426863","display_name":"Suffix tree","level":3,"score":0.5553452968597412},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.5351302027702332},{"id":"https://openalex.org/C2779259728","wikidata":"https://www.wikidata.org/wiki/Q281472","display_name":"Suffix array","level":3,"score":0.5151549577713013},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.45406338572502136},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.4492751359939575},{"id":"https://openalex.org/C100903775","wikidata":"https://www.wikidata.org/wiki/Q5157028","display_name":"Compressed suffix array","level":4,"score":0.44395917654037476},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.38509732484817505},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.360923171043396},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.16269975900650024},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1080/00207160214653","is_oa":false,"landing_page_url":"https://doi.org/10.1080/00207160214653","pdf_url":null,"source":{"id":"https://openalex.org/S124867444","display_name":"International Journal of Computer Mathematics","issn_l":"0020-7160","issn":["0020-7160","1026-7425","1029-0265"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320547","host_organization_name":"Taylor & Francis","host_organization_lineage":["https://openalex.org/P4310320547"],"host_organization_lineage_names":["Taylor & Francis"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"International Journal of Computer Mathematics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1485516007","https://openalex.org/W1518642083","https://openalex.org/W1595313252","https://openalex.org/W1972770363","https://openalex.org/W1984074972","https://openalex.org/W1985108724","https://openalex.org/W1987108302","https://openalex.org/W2003502073","https://openalex.org/W2055043387","https://openalex.org/W2107745473","https://openalex.org/W2116628377","https://openalex.org/W2122962290","https://openalex.org/W2134826720","https://openalex.org/W2148968778","https://openalex.org/W2154104338","https://openalex.org/W2533248932","https://openalex.org/W4365799918"],"related_works":["https://openalex.org/W2003608043","https://openalex.org/W153119118","https://openalex.org/W2583658747","https://openalex.org/W2405892617","https://openalex.org/W4240792180","https://openalex.org/W2158874082","https://openalex.org/W1575722140","https://openalex.org/W4293529780","https://openalex.org/W2738126475","https://openalex.org/W2063556310"],"abstract_inverted_index":{"We":[0,63],"present":[1],"in":[2,52,76],"this":[3],"article":[4],"a":[5,18,25,45],"linear":[6],"time":[7],"and":[8,47],"space":[9],"method":[10,31,68],"for":[11,21,55],"the":[12,15,35,38,58,72],"computation":[13,73],"of":[14,17,24,37,41,60,74],"length":[16],"repeated":[19],"suffix":[20],"each":[22],"prefix":[23],"given":[26],"word":[27],"p":[28,42,61],".":[29,62],"Our":[30],"is":[32,44],"based":[33],"on":[34],"utilization":[36],"factor":[39],"oracle":[40],"which":[43],"new":[46],"very":[48],"compact":[49],"structure":[50],"introduced":[51],"[1],":[53],"used":[54],"representing":[56],"all":[57],"factors":[59],"exhibit":[64],"applications":[65],"where":[66],"our":[67],"really":[69],"speeds":[70],"up":[71],"repetitions":[75],"words.":[77],"Keywords:":[78],"Combinatorics":[79],"On":[80],"WordString":[81],"AlgorithmsRepetitionsFactor":[82],"OracleSuffix":[83],"Link":[84]},"counts_by_year":[{"year":2018,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}