{"id":"https://openalex.org/W3163235749","doi":"https://doi.org/10.1073/pnas.2024287118","title":"A modular computational framework for medical digital twins","display_name":"A modular computational framework for medical digital twins","publication_year":2021,"publication_date":"2021-05-10","ids":{"openalex":"https://openalex.org/W3163235749","doi":"https://doi.org/10.1073/pnas.2024287118","mag":"3163235749","pmid":"https://pubmed.ncbi.nlm.nih.gov/33972437"},"language":"en","primary_location":{"id":"doi:10.1073/pnas.2024287118","is_oa":true,"landing_page_url":"https://doi.org/10.1073/pnas.2024287118","pdf_url":null,"source":{"id":"https://openalex.org/S125754415","display_name":"Proceedings of the National Academy of Sciences","issn_l":"0027-8424","issn":["0027-8424","1091-6490"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320052","host_organization_name":"National Academy of Sciences","host_organization_lineage":["https://openalex.org/P4310320052"],"host_organization_lineage_names":["National Academy of Sciences"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the National Academy of Sciences","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1073/pnas.2024287118","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066026197","display_name":"Joseph Masison","orcid":"https://orcid.org/0000-0003-2113-9282"},"institutions":[{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"J. Masison","raw_affiliation_strings":["Center for Quantitative Medicine, University of Connecticut Health Center, Farmington, CT 06032;"],"affiliations":[{"raw_affiliation_string":"Center for Quantitative Medicine, University of Connecticut Health Center, Farmington, CT 06032;","institution_ids":["https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112871755","display_name":"Jonathan Beezley","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"J. Beezley","raw_affiliation_strings":["Kitware Inc., Clifton Park, NY 12065;"],"affiliations":[{"raw_affiliation_string":"Kitware Inc., Clifton Park, NY 12065;","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062781696","display_name":"Yefeng Mei","orcid":"https://orcid.org/0000-0001-7341-3453"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Y. Mei","raw_affiliation_strings":["Department of Computer Science, University of Michigan, Ann Arbor, MI 48109;"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Michigan, Ann Arbor, MI 48109;","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019771259","display_name":"Henrique AL Ribeiro","orcid":"https://orcid.org/0000-0001-9802-5211"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"HAL Ribeiro","raw_affiliation_strings":["Department of Medicine, University of Florida, Gainesville, FL 32611"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Florida, Gainesville, FL 32611","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063355554","display_name":"Adam Knapp","orcid":"https://orcid.org/0000-0002-5719-6003"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. C. Knapp","raw_affiliation_strings":["Department of Medicine, University of Florida, Gainesville, FL 32611"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Florida, Gainesville, FL 32611","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042864703","display_name":"Luis Sordo Vieira","orcid":null},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"L. Sordo Vieira","raw_affiliation_strings":["Department of Medicine, University of Florida, Gainesville, FL 32611"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Florida, Gainesville, FL 32611","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111164986","display_name":"Bandita Adhikari","orcid":null},"institutions":[{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B. Adhikari","raw_affiliation_strings":["Center for Quantitative Medicine, University of Connecticut Health Center, Farmington, CT 06032;"],"affiliations":[{"raw_affiliation_string":"Center for Quantitative Medicine, University of Connecticut Health Center, Farmington, CT 06032;","institution_ids":["https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050637048","display_name":"Yogesh Scindia","orcid":"https://orcid.org/0000-0001-6382-6289"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Y. Scindia","raw_affiliation_strings":["Department of Medicine, University of Florida, Gainesville, FL 32611"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Florida, Gainesville, FL 32611","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082005740","display_name":"Michael Grauer","orcid":"https://orcid.org/0000-0002-4167-1076"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"M. Grauer","raw_affiliation_strings":["Kitware Inc., Clifton Park, NY 12065;"],"affiliations":[{"raw_affiliation_string":"Kitware Inc., Clifton Park, NY 12065;","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070127396","display_name":"Brian Helba","orcid":"https://orcid.org/0000-0003-2628-805X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"B. Helba","raw_affiliation_strings":["Kitware Inc., Clifton Park, NY 12065;"],"affiliations":[{"raw_affiliation_string":"Kitware Inc., Clifton Park, NY 12065;","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030139366","display_name":"W. J. Schroeder","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"W. Schroeder","raw_affiliation_strings":["Kitware Inc., Clifton Park, NY 12065;"],"affiliations":[{"raw_affiliation_string":"Kitware Inc., Clifton Park, NY 12065;","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023183325","display_name":"Borna Mehrad","orcid":"https://orcid.org/0000-0001-5198-065X"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B. Mehrad","raw_affiliation_strings":["Department of Medicine, University of Florida, Gainesville, FL 32611"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Florida, Gainesville, FL 32611","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091010756","display_name":"Reinhard Laubenbacher","orcid":"https://orcid.org/0000-0002-9143-9451"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. Laubenbacher","raw_affiliation_strings":["Department of Medicine, University of Florida, Gainesville, FL 32611"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, University of Florida, Gainesville, FL 32611","institution_ids":["https://openalex.org/I33213144"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":13,"corresponding_author_ids":["https://openalex.org/A5066026197"],"corresponding_institution_ids":["https://openalex.org/I75929689"],"apc_list":null,"apc_paid":null,"fwci":7.952,"has_fulltext":false,"cited_by_count":92,"citation_normalized_percentile":{"value":0.98504099,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":100},"biblio":{"volume":"118","issue":"20","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9854000210762024,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9854000210762024,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13280","display_name":"Biomedical and Engineering Education","score":0.9721999764442444,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10763","display_name":"Digital Transformation in Industry","score":0.9595999717712402,"subfield":{"id":"https://openalex.org/subfields/2209","display_name":"Industrial and Manufacturing Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.8512699604034424},{"id":"https://openalex.org/keywords/component","display_name":"Component (thermodynamics)","score":0.7644658088684082},{"id":"https://openalex.org/keywords/dependency","display_name":"Dependency (UML)","score":0.7063803672790527},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7032231092453003},{"id":"https://openalex.org/keywords/implementation","display_name":"Implementation","score":0.6654118299484253},{"id":"https://openalex.org/keywords/modularity","display_name":"Modularity (biology)","score":0.5990781784057617},{"id":"https://openalex.org/keywords/architecture","display_name":"Architecture","score":0.4611762762069702},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.44841447472572327},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3635489344596863},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.34980446100234985},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3078729510307312},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1406831443309784},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10467296838760376}],"concepts":[{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.8512699604034424},{"id":"https://openalex.org/C168167062","wikidata":"https://www.wikidata.org/wiki/Q1117970","display_name":"Component (thermodynamics)","level":2,"score":0.7644658088684082},{"id":"https://openalex.org/C19768560","wikidata":"https://www.wikidata.org/wiki/Q320727","display_name":"Dependency (UML)","level":2,"score":0.7063803672790527},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7032231092453003},{"id":"https://openalex.org/C26713055","wikidata":"https://www.wikidata.org/wiki/Q245962","display_name":"Implementation","level":2,"score":0.6654118299484253},{"id":"https://openalex.org/C2779478453","wikidata":"https://www.wikidata.org/wiki/Q6889748","display_name":"Modularity (biology)","level":2,"score":0.5990781784057617},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.4611762762069702},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.44841447472572327},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3635489344596863},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.34980446100234985},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3078729510307312},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1406831443309784},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10467296838760376},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000935","descriptor_name":"Antifungal Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000935","descriptor_name":"Antifungal Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000935","descriptor_name":"Antifungal Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000935","descriptor_name":"Antifungal Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D001228","descriptor_name":"Aspergillosis","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D001232","descriptor_name":"Aspergillus fumigatus","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D001232","descriptor_name":"Aspergillus fumigatus","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D001232","descriptor_name":"Aspergillus fumigatus","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D001232","descriptor_name":"Aspergillus fumigatus","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D001232","descriptor_name":"Aspergillus fumigatus","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D001232","descriptor_name":"Aspergillus fumigatus","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D001232","descriptor_name":"Aspergillus fumigatus","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D001232","descriptor_name":"Aspergillus fumigatus","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013172","descriptor_name":"Spores, Fungal","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D013172","descriptor_name":"Spores, Fungal","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D013172","descriptor_name":"Spores, Fungal","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D013172","descriptor_name":"Spores, Fungal","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D013172","descriptor_name":"Spores, Fungal","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D013172","descriptor_name":"Spores, Fungal","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D013172","descriptor_name":"Spores, Fungal","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D013172","descriptor_name":"Spores, Fungal","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D066230","descriptor_name":"Patient-Specific Modeling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066230","descriptor_name":"Patient-Specific Modeling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066230","descriptor_name":"Patient-Specific Modeling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066230","descriptor_name":"Patient-Specific Modeling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1073/pnas.2024287118","is_oa":true,"landing_page_url":"https://doi.org/10.1073/pnas.2024287118","pdf_url":null,"source":{"id":"https://openalex.org/S125754415","display_name":"Proceedings of the National Academy of Sciences","issn_l":"0027-8424","issn":["0027-8424","1091-6490"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320052","host_organization_name":"National Academy of Sciences","host_organization_lineage":["https://openalex.org/P4310320052"],"host_organization_lineage_names":["National Academy of Sciences"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the National Academy of Sciences","raw_type":"journal-article"},{"id":"pmid:33972437","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33972437","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the National Academy of Sciences of the United States of America","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8157963","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8157963","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Proc Natl Acad Sci U S A","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1073/pnas.2024287118","is_oa":true,"landing_page_url":"https://doi.org/10.1073/pnas.2024287118","pdf_url":null,"source":{"id":"https://openalex.org/S125754415","display_name":"Proceedings of the National Academy of Sciences","issn_l":"0027-8424","issn":["0027-8424","1091-6490"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320052","host_organization_name":"National Academy of Sciences","host_organization_lineage":["https://openalex.org/P4310320052"],"host_organization_lineage_names":["National Academy of Sciences"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the National Academy of Sciences","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.5600000023841858}],"awards":[{"id":"https://openalex.org/G2713374846","display_name":null,"funder_award_id":"1 R01AI135128-01","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G3558137591","display_name":null,"funder_award_id":"1R01GM127909-01","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G5041061005","display_name":null,"funder_award_id":"T-90DE021989","funder_id":"https://openalex.org/F4320337365","funder_display_name":"National Institute of Dental and Craniofacial Research"},{"id":"https://openalex.org/G5405459229","display_name":null,"funder_award_id":"18TPA34170486","funder_id":"https://openalex.org/F4320306230","funder_display_name":"American Heart Association"},{"id":"https://openalex.org/G752597853","display_name":null,"funder_award_id":"1U01EB024501-01","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"}],"funders":[{"id":"https://openalex.org/F4320306230","display_name":"American Heart Association","ror":"https://ror.org/013kjyp64"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"},{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"},{"id":"https://openalex.org/F4320337365","display_name":"National Institute of Dental and Craniofacial Research","ror":"https://ror.org/004a2wv92"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W2044785638","https://openalex.org/W2083089726","https://openalex.org/W2093228727","https://openalex.org/W2140862057","https://openalex.org/W2146292423","https://openalex.org/W2150908245","https://openalex.org/W2162858279","https://openalex.org/W2296335794","https://openalex.org/W2338353361","https://openalex.org/W2786689981","https://openalex.org/W2909072371","https://openalex.org/W2955790054","https://openalex.org/W2973779239","https://openalex.org/W2976301483","https://openalex.org/W2996020697","https://openalex.org/W2998186918","https://openalex.org/W3005031195","https://openalex.org/W3010152544"],"related_works":["https://openalex.org/W2297768894","https://openalex.org/W2378076731","https://openalex.org/W3109014690","https://openalex.org/W2122405502","https://openalex.org/W2114254072","https://openalex.org/W2127721729","https://openalex.org/W2884798239","https://openalex.org/W1531253727","https://openalex.org/W2366669483","https://openalex.org/W2333635112"],"abstract_inverted_index":{"This":[0,126],"paper":[1,127],"presents":[2,128],"a":[3,23,65,120,130,133,141],"modular":[4,105],"software":[5,106],"design":[6],"for":[7,28,64,108],"the":[8,54,83,109],"construction":[9],"of":[10,31,40,68,88,113,140],"computational":[11,38],"modeling":[12],"technology":[13],"that":[14,115],"will":[15],"help":[16,57],"implement":[17],"precision":[18],"medicine.":[19],"In":[20],"analogy":[21],"to":[22,44,56],"common":[24],"industrial":[25],"strategy":[26],"used":[27],"preventive":[29],"maintenance":[30],"engineered":[32],"products,":[33],"medical":[34,69],"digital":[35],"twins":[36],"are":[37],"models":[39,91,114],"disease":[41],"processes":[42],"calibrated":[43],"individual":[45],"patients":[46],"using":[47],"multiple":[48,89],"heterogeneous":[49],"data":[50],"streams.":[51],"They":[52],"have":[53],"potential":[55],"improve":[58],"diagnosis,":[59],"prognosis,":[60],"and":[61,78,81,85,100,111,118],"personalized":[62],"treatment":[63],"wide":[66],"range":[67],"conditions.":[70],"Their":[71],"large-scale":[72],"development":[73],"relies":[74],"on":[75],"both":[76],"mechanistic":[77],"data-driven":[79],"techniques":[80],"requires":[82,102],"integration":[84,101,110],"ongoing":[86],"update":[87],"component":[90],"developed":[92],"across":[93],"many":[94],"different":[95],"laboratories.":[96],"Distributed":[97],"model":[98,123,139],"building":[99,124],"an":[103,137],"open-source":[104],"platform":[107],"simulation":[112],"is":[116],"scalable":[117],"supports":[119],"decentralized,":[121],"community-based":[122],"process.":[125],"such":[129],"platform,":[131],"including":[132],"case":[134],"study":[135],"in":[136],"animal":[138],"respiratory":[142],"fungal":[143],"infection.":[144]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":24},{"year":2024,"cited_by_count":20},{"year":2023,"cited_by_count":21},{"year":2022,"cited_by_count":22},{"year":2021,"cited_by_count":3}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
