{"id":"https://openalex.org/W4389326437","doi":"https://doi.org/10.1038/s43588-023-00560-w","title":"Deep contrastive learning of molecular conformation for efficient property prediction","display_name":"Deep contrastive learning of molecular conformation for efficient property prediction","publication_year":2023,"publication_date":"2023-12-04","ids":{"openalex":"https://openalex.org/W4389326437","doi":"https://doi.org/10.1038/s43588-023-00560-w","pmid":"https://pubmed.ncbi.nlm.nih.gov/38177719"},"language":"en","primary_location":{"id":"doi:10.1038/s43588-023-00560-w","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s43588-023-00560-w","pdf_url":null,"source":{"id":"https://openalex.org/S4210228084","display_name":"Nature Computational Science","issn_l":"2662-8457","issn":["2662-8457"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Computational Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042277801","display_name":"Yang Jeong Park","orcid":"https://orcid.org/0000-0002-3773-7407"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I2802457231","display_name":"New Generation University College","ror":"https://ror.org/015aem925","country_code":"ET","type":"education","lineage":["https://openalex.org/I2802457231"]},{"id":"https://openalex.org/I63966007","display_name":"Massachusetts Institute of Technology","ror":"https://ror.org/042nb2s44","country_code":"US","type":"education","lineage":["https://openalex.org/I63966007"]},{"id":"https://openalex.org/I90023481","display_name":"National Institute of Information and Communications Technology","ror":"https://ror.org/016bgq349","country_code":"JP","type":"facility","lineage":["https://openalex.org/I90023481"]}],"countries":["ET","JP","KR","US"],"is_corresponding":true,"raw_author_name":"Yang Jeong Park","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea. parkyj@mit.edu","Department of Nuclear Science and Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA. parkyj@mit.edu","Institute of New Media and Communications, Seoul National University, Seoul, Republic of Korea. parkyj@mit.edu","Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea. parkyj@mit.edu","institution_ids":["https://openalex.org/I2802457231","https://openalex.org/I139264467"]},{"raw_affiliation_string":"Department of Nuclear Science and Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA. parkyj@mit.edu","institution_ids":["https://openalex.org/I63966007"]},{"raw_affiliation_string":"Institute of New Media and Communications, Seoul National University, Seoul, Republic of Korea. parkyj@mit.edu","institution_ids":["https://openalex.org/I90023481"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083994142","display_name":"HyunGi Kim","orcid":"https://orcid.org/0009-0005-8854-1446"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"HyunGi Kim","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021872109","display_name":"Jeonghee Jo","orcid":"https://orcid.org/0000-0003-1154-1761"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I4210164379","display_name":"Seoul Media Institute of Technology","ror":"https://ror.org/04ywg4h07","country_code":"KR","type":"education","lineage":["https://openalex.org/I4210164379"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Jeonghee Jo","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea","Institute of New Media and Communications, Seoul National University, Seoul, Republic of Korea"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea","institution_ids":["https://openalex.org/I139264467"]},{"raw_affiliation_string":"Institute of New Media and Communications, Seoul National University, Seoul, Republic of Korea","institution_ids":["https://openalex.org/I4210164379","https://openalex.org/I139264467"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086877012","display_name":"Sungroh Yoon","orcid":"https://orcid.org/0000-0002-2367-197X"},"institutions":[{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]},{"id":"https://openalex.org/I4210123907","display_name":"National University College","ror":"https://ror.org/02hs8e066","country_code":"PR","type":"education","lineage":["https://openalex.org/I4210123907"]}],"countries":["KR","PR"],"is_corresponding":false,"raw_author_name":"Sungroh Yoon","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea. sryoon@snu.ac.kr","Institute of New Media and Communications, Seoul National University, Seoul, Republic of Korea. sryoon@snu.ac.kr","Interdisciplinary Program in Artificial Intelligence, Seoul National University, Seoul, Republic of Korea. sryoon@snu.ac.kr","Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea. sryoon@snu.ac.kr","institution_ids":["https://openalex.org/I4210123907"]},{"raw_affiliation_string":"Institute of New Media and Communications, Seoul National University, Seoul, Republic of Korea. sryoon@snu.ac.kr","institution_ids":["https://openalex.org/I4210123907"]},{"raw_affiliation_string":"Interdisciplinary Program in Artificial Intelligence, Seoul National University, Seoul, Republic of Korea. sryoon@snu.ac.kr","institution_ids":["https://openalex.org/I4210123907"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Seoul National University, Seoul, Republic of Korea","institution_ids":["https://openalex.org/I139264467"]}]}],"institutions":[],"countries_distinct_count":5,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5042277801"],"corresponding_institution_ids":["https://openalex.org/I139264467","https://openalex.org/I2802457231","https://openalex.org/I63966007","https://openalex.org/I90023481"],"apc_list":{"value":9750,"currency":"EUR","value_usd":11690},"apc_paid":null,"fwci":1.9809,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.88884817,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"3","issue":"12","first_page":"1015","last_page":"1022"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9810000061988831,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/property","display_name":"Property (philosophy)","score":0.6124217510223389},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4604526162147522},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4416297376155853},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.38591670989990234},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.35889798402786255},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.32242870330810547},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.20504441857337952},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.15648820996284485}],"concepts":[{"id":"https://openalex.org/C189950617","wikidata":"https://www.wikidata.org/wiki/Q937228","display_name":"Property (philosophy)","level":2,"score":0.6124217510223389},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4604526162147522},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4416297376155853},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.38591670989990234},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.35889798402786255},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.32242870330810547},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.20504441857337952},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.15648820996284485}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004738","descriptor_name":"Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004738","descriptor_name":"Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004738","descriptor_name":"Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004738","descriptor_name":"Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004738","descriptor_name":"Engineering","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012063","descriptor_name":"Relaxation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012063","descriptor_name":"Relaxation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012063","descriptor_name":"Relaxation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012063","descriptor_name":"Relaxation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012063","descriptor_name":"Relaxation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1038/s43588-023-00560-w","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s43588-023-00560-w","pdf_url":null,"source":{"id":"https://openalex.org/S4210228084","display_name":"Nature Computational Science","issn_l":"2662-8457","issn":["2662-8457"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Computational Science","raw_type":"journal-article"},{"id":"pmid:38177719","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38177719","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature computational science","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.41999998688697815,"display_name":"Climate action","id":"https://metadata.un.org/sdg/13"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W1970549136","https://openalex.org/W1971275758","https://openalex.org/W1975147762","https://openalex.org/W1991238353","https://openalex.org/W2023271753","https://openalex.org/W2038702914","https://openalex.org/W2046412723","https://openalex.org/W2049996223","https://openalex.org/W2058363175","https://openalex.org/W2071579644","https://openalex.org/W2080635178","https://openalex.org/W2244785476","https://openalex.org/W2601081289","https://openalex.org/W2610148085","https://openalex.org/W2756519801","https://openalex.org/W2766856748","https://openalex.org/W2778051509","https://openalex.org/W2911997094","https://openalex.org/W2923693308","https://openalex.org/W2931367569","https://openalex.org/W2969996838","https://openalex.org/W2970971581","https://openalex.org/W3018495986","https://openalex.org/W3039596418","https://openalex.org/W3104644561","https://openalex.org/W3105259638","https://openalex.org/W3105321997","https://openalex.org/W3111168552","https://openalex.org/W3183931249","https://openalex.org/W3209752990","https://openalex.org/W3212512279","https://openalex.org/W4213077304","https://openalex.org/W4214949685","https://openalex.org/W4221145170","https://openalex.org/W4221149941","https://openalex.org/W4225405705","https://openalex.org/W4282053982","https://openalex.org/W4285491035","https://openalex.org/W4297951436","https://openalex.org/W4394256276","https://openalex.org/W6810483326","https://openalex.org/W6920821714"],"related_works":["https://openalex.org/W2731899572","https://openalex.org/W3215138031","https://openalex.org/W3009238340","https://openalex.org/W4321369474","https://openalex.org/W4360585206","https://openalex.org/W4285208911","https://openalex.org/W3082895349","https://openalex.org/W4213079790","https://openalex.org/W2248239756","https://openalex.org/W4323565446"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":6}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
