{"id":"https://openalex.org/W3199805689","doi":"https://doi.org/10.1038/s43588-021-00129-5","title":"Fast and accurate bootstrap confidence limits on genome-scale phylogenies using little bootstraps","display_name":"Fast and accurate bootstrap confidence limits on genome-scale phylogenies using little bootstraps","publication_year":2021,"publication_date":"2021-09-22","ids":{"openalex":"https://openalex.org/W3199805689","doi":"https://doi.org/10.1038/s43588-021-00129-5","mag":"3199805689","pmid":"https://pubmed.ncbi.nlm.nih.gov/34734192"},"language":"en","primary_location":{"id":"doi:10.1038/s43588-021-00129-5","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s43588-021-00129-5","pdf_url":null,"source":{"id":"https://openalex.org/S4210228084","display_name":"Nature Computational Science","issn_l":"2662-8457","issn":["2662-8457"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Computational Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8560003","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020357256","display_name":"Sudip Sharma","orcid":"https://orcid.org/0000-0002-0469-1211"},"institutions":[{"id":"https://openalex.org/I84392919","display_name":"Temple University","ror":"https://ror.org/00kx1jb78","country_code":"US","type":"education","lineage":["https://openalex.org/I84392919"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sudip Sharma","raw_affiliation_strings":["Department of Biology, Temple University, Philadelphia, PA","Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA","Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA, USA"],"raw_orcid":"https://orcid.org/0000-0002-0469-1211","affiliations":[{"raw_affiliation_string":"Department of Biology, Temple University, Philadelphia, PA","institution_ids":["https://openalex.org/I84392919"]},{"raw_affiliation_string":"Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA","institution_ids":["https://openalex.org/I84392919"]},{"raw_affiliation_string":"Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I84392919"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100680948","display_name":"Sudhir Kumar","orcid":"https://orcid.org/0000-0002-9918-8212"},"institutions":[{"id":"https://openalex.org/I185163786","display_name":"King Abdulaziz University","ror":"https://ror.org/02ma4wv74","country_code":"SA","type":"education","lineage":["https://openalex.org/I185163786"]},{"id":"https://openalex.org/I84392919","display_name":"Temple University","ror":"https://ror.org/00kx1jb78","country_code":"US","type":"education","lineage":["https://openalex.org/I84392919"]}],"countries":["SA","US"],"is_corresponding":false,"raw_author_name":"Sudhir Kumar","raw_affiliation_strings":["Center for Excellence in Genome Medicine and Research, King Abdulaziz University, Jeddah, Saudi Arabia","Department of Biology, Temple University, Philadelphia, PA","Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA","Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA, USA"],"raw_orcid":"https://orcid.org/0000-0002-9918-8212","affiliations":[{"raw_affiliation_string":"Center for Excellence in Genome Medicine and Research, King Abdulaziz University, Jeddah, Saudi Arabia","institution_ids":["https://openalex.org/I185163786"]},{"raw_affiliation_string":"Department of Biology, Temple University, Philadelphia, PA","institution_ids":["https://openalex.org/I84392919"]},{"raw_affiliation_string":"Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA","institution_ids":["https://openalex.org/I84392919"]},{"raw_affiliation_string":"Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA, USA","institution_ids":["https://openalex.org/I84392919"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5020357256"],"corresponding_institution_ids":["https://openalex.org/I84392919"],"apc_list":{"value":9750,"currency":"EUR","value_usd":11690},"apc_paid":null,"fwci":1.4657,"has_fulltext":false,"cited_by_count":28,"citation_normalized_percentile":{"value":0.82285745,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"1","issue":"9","first_page":"573","last_page":"577"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9832000136375427,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bootstrapping","display_name":"Bootstrapping (finance)","score":0.9485318660736084},{"id":"https://openalex.org/keywords/replicate","display_name":"Replicate","score":0.78449547290802},{"id":"https://openalex.org/keywords/confidence-interval","display_name":"Confidence interval","score":0.6183364391326904},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5935814380645752},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5414943099021912},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.4692007899284363},{"id":"https://openalex.org/keywords/fraction","display_name":"Fraction (chemistry)","score":0.44118624925613403},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.3783243000507355},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3269743323326111},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.15750321745872498},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.15055152773857117},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09505611658096313}],"concepts":[{"id":"https://openalex.org/C207609745","wikidata":"https://www.wikidata.org/wiki/Q4944086","display_name":"Bootstrapping (finance)","level":2,"score":0.9485318660736084},{"id":"https://openalex.org/C2781162219","wikidata":"https://www.wikidata.org/wiki/Q26250693","display_name":"Replicate","level":2,"score":0.78449547290802},{"id":"https://openalex.org/C44249647","wikidata":"https://www.wikidata.org/wiki/Q208498","display_name":"Confidence interval","level":2,"score":0.6183364391326904},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5935814380645752},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5414943099021912},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.4692007899284363},{"id":"https://openalex.org/C149629883","wikidata":"https://www.wikidata.org/wiki/Q660926","display_name":"Fraction (chemistry)","level":2,"score":0.44118624925613403},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.3783243000507355},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3269743323326111},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.15750321745872498},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.15055152773857117},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09505611658096313},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1038/s43588-021-00129-5","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s43588-021-00129-5","pdf_url":null,"source":{"id":"https://openalex.org/S4210228084","display_name":"Nature Computational Science","issn_l":"2662-8457","issn":["2662-8457"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Computational Science","raw_type":"journal-article"},{"id":"pmid:34734192","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34734192","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature computational science","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8560003","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8560003","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nat Comput Sci","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:8560003","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8560003","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nat Comput Sci","raw_type":"Text"},"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.7200000286102295}],"awards":[{"id":"https://openalex.org/G5067003845","display_name":null,"funder_award_id":"GM139540-01","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":30,"referenced_works":["https://openalex.org/W1983102293","https://openalex.org/W1992566665","https://openalex.org/W1999083683","https://openalex.org/W2030966943","https://openalex.org/W2040615655","https://openalex.org/W2040975718","https://openalex.org/W2100806401","https://openalex.org/W2111647009","https://openalex.org/W2117801354","https://openalex.org/W2118224447","https://openalex.org/W2124511083","https://openalex.org/W2127847431","https://openalex.org/W2146774335","https://openalex.org/W2151736966","https://openalex.org/W2157674573","https://openalex.org/W2565372882","https://openalex.org/W2602840959","https://openalex.org/W2732250892","https://openalex.org/W2772798877","https://openalex.org/W2801900613","https://openalex.org/W2888190843","https://openalex.org/W2902515710","https://openalex.org/W2942952185","https://openalex.org/W2944397307","https://openalex.org/W2950355266","https://openalex.org/W3025857586","https://openalex.org/W3199805689","https://openalex.org/W4394273169","https://openalex.org/W6888847079","https://openalex.org/W6925776100"],"related_works":["https://openalex.org/W4254851101","https://openalex.org/W3171007296","https://openalex.org/W22115721","https://openalex.org/W2211931904","https://openalex.org/W2321234655","https://openalex.org/W2065444835","https://openalex.org/W4394550905","https://openalex.org/W2470062578","https://openalex.org/W2952773340","https://openalex.org/W2981861370"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":1}],"updated_date":"2026-05-16T08:24:45.110214","created_date":"2025-10-10T00:00:00"}
