{"id":"https://openalex.org/W3165407483","doi":"https://doi.org/10.1038/s43588-021-00060-9","title":"Biomolecular modeling thrives in the age of technology","display_name":"Biomolecular modeling thrives in the age of technology","publication_year":2021,"publication_date":"2021-05-20","ids":{"openalex":"https://openalex.org/W3165407483","doi":"https://doi.org/10.1038/s43588-021-00060-9","mag":"3165407483","pmid":"https://pubmed.ncbi.nlm.nih.gov/34423314"},"language":"en","primary_location":{"id":"doi:10.1038/s43588-021-00060-9","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s43588-021-00060-9","pdf_url":"https://www.nature.com/articles/s43588-021-00060-9.pdf","source":{"id":"https://openalex.org/S4210228084","display_name":"Nature Computational Science","issn_l":"2662-8457","issn":["2662-8457"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Computational Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://www.nature.com/articles/s43588-021-00060-9.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046513501","display_name":"Tamar Schlick","orcid":"https://orcid.org/0000-0002-2392-2062"},"institutions":[{"id":"https://openalex.org/I258800397","display_name":"New York University Shanghai","ror":"https://ror.org/02vpsdb40","country_code":"CN","type":"education","lineage":["https://openalex.org/I258800397","https://openalex.org/I57206974"]},{"id":"https://openalex.org/I36672615","display_name":"Courant Institute of Mathematical Sciences","ror":"https://ror.org/037tm7f56","country_code":"US","type":"education","lineage":["https://openalex.org/I36672615","https://openalex.org/I57206974"]},{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]},{"id":"https://openalex.org/I66867065","display_name":"East China Normal University","ror":"https://ror.org/02n96ep67","country_code":"CN","type":"education","lineage":["https://openalex.org/I66867065"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Tamar Schlick","raw_affiliation_strings":["Courant Institute of Mathematical Sciences, New York University, New York, NY, USA","Department of Chemistry, New York University, New York, NY, USA","New York University-East China Normal University Center for Computational Chemistry at New York University Shanghai, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0002-2392-2062","affiliations":[{"raw_affiliation_string":"Courant Institute of Mathematical Sciences, New York University, New York, NY, USA","institution_ids":["https://openalex.org/I36672615","https://openalex.org/I57206974"]},{"raw_affiliation_string":"Department of Chemistry, New York University, New York, NY, USA","institution_ids":["https://openalex.org/I57206974"]},{"raw_affiliation_string":"New York University-East China Normal University Center for Computational Chemistry at New York University Shanghai, Shanghai, China","institution_ids":["https://openalex.org/I258800397","https://openalex.org/I66867065"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006329960","display_name":"Stephanie Portillo\u2010Ledesma","orcid":"https://orcid.org/0000-0002-8211-5447"},"institutions":[{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephanie Portillo-Ledesma","raw_affiliation_strings":["Department of Chemistry, New York University, New York, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Chemistry, New York University, New York, NY, USA","institution_ids":["https://openalex.org/I57206974"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5046513501"],"corresponding_institution_ids":["https://openalex.org/I258800397","https://openalex.org/I36672615","https://openalex.org/I57206974","https://openalex.org/I66867065"],"apc_list":{"value":9750,"currency":"EUR","value_usd":11690},"apc_paid":{"value":9750,"currency":"EUR","value_usd":11690},"fwci":7.6543,"has_fulltext":true,"cited_by_count":114,"citation_normalized_percentile":{"value":0.98388484,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"1","issue":"5","first_page":"321","last_page":"331"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9905999898910522,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/adaptation","display_name":"Adaptation (eye)","score":0.6508023738861084},{"id":"https://openalex.org/keywords/outreach","display_name":"Outreach","score":0.5663555860519409},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5504869818687439},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5430483222007751},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4759659171104431},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.46485698223114014},{"id":"https://openalex.org/keywords/nanotechnology","display_name":"Nanotechnology","score":0.40702587366104126},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14108723402023315},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.11112618446350098},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.10375291109085083},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.09037703275680542}],"concepts":[{"id":"https://openalex.org/C139807058","wikidata":"https://www.wikidata.org/wiki/Q352374","display_name":"Adaptation (eye)","level":2,"score":0.6508023738861084},{"id":"https://openalex.org/C2781400479","wikidata":"https://www.wikidata.org/wiki/Q11640","display_name":"Outreach","level":2,"score":0.5663555860519409},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5504869818687439},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5430483222007751},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4759659171104431},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.46485698223114014},{"id":"https://openalex.org/C171250308","wikidata":"https://www.wikidata.org/wiki/Q11468","display_name":"Nanotechnology","level":1,"score":0.40702587366104126},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14108723402023315},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.11112618446350098},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.10375291109085083},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.09037703275680542},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1038/s43588-021-00060-9","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s43588-021-00060-9","pdf_url":"https://www.nature.com/articles/s43588-021-00060-9.pdf","source":{"id":"https://openalex.org/S4210228084","display_name":"Nature Computational Science","issn_l":"2662-8457","issn":["2662-8457"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Computational Science","raw_type":"journal-article"},{"id":"pmid:34423314","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34423314","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature computational science","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8378674","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8378674","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nat Comput Sci","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1038/s43588-021-00060-9","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s43588-021-00060-9","pdf_url":"https://www.nature.com/articles/s43588-021-00060-9.pdf","source":{"id":"https://openalex.org/S4210228084","display_name":"Nature Computational Science","issn_l":"2662-8457","issn":["2662-8457"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Computational Science","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions","score":0.6299999952316284}],"awards":[{"id":"https://openalex.org/G4737793588","display_name":null,"funder_award_id":"2030377","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3165407483.pdf","grobid_xml":"https://content.openalex.org/works/W3165407483.grobid-xml"},"referenced_works_count":168,"referenced_works":["https://openalex.org/W119643168","https://openalex.org/W185137928","https://openalex.org/W594999192","https://openalex.org/W1548178570","https://openalex.org/W1667973626","https://openalex.org/W1926968922","https://openalex.org/W1952317074","https://openalex.org/W1966743338","https://openalex.org/W1974331509","https://openalex.org/W1976821598","https://openalex.org/W1978880915","https://openalex.org/W1979313952","https://openalex.org/W1983266785","https://openalex.org/W1988996356","https://openalex.org/W1992899488","https://openalex.org/W1993177346","https://openalex.org/W1998829408","https://openalex.org/W2003329164","https://openalex.org/W2004303971","https://openalex.org/W2004450485","https://openalex.org/W2017394797","https://openalex.org/W2018457944","https://openalex.org/W2019076206","https://openalex.org/W2021064626","https://openalex.org/W2023233839","https://openalex.org/W2025444507","https://openalex.org/W2026428297","https://openalex.org/W2026737855","https://openalex.org/W2027815611","https://openalex.org/W2028130802","https://openalex.org/W2028263411","https://openalex.org/W2030286884","https://openalex.org/W2030474871","https://openalex.org/W2030976617","https://openalex.org/W2035621643","https://openalex.org/W2039369142","https://openalex.org/W2040809566","https://openalex.org/W2046001409","https://openalex.org/W2050774715","https://openalex.org/W2056661808","https://openalex.org/W2061042699","https://openalex.org/W2065963893","https://openalex.org/W2067174909","https://openalex.org/W2067228077","https://openalex.org/W2067236515","https://openalex.org/W2067525553","https://openalex.org/W2070853010","https://openalex.org/W2075460992","https://openalex.org/W2075760680","https://openalex.org/W2078750907","https://openalex.org/W2079199763","https://openalex.org/W2079318633","https://openalex.org/W2080945020","https://openalex.org/W2081645999","https://openalex.org/W2081724315","https://openalex.org/W2083589122","https://openalex.org/W2085312804","https://openalex.org/W2086115719","https://openalex.org/W2086243700","https://openalex.org/W2091148298","https://openalex.org/W2100251789","https://openalex.org/W2100833559","https://openalex.org/W2101569554","https://openalex.org/W2109801072","https://openalex.org/W2110872379","https://openalex.org/W2112959255","https://openalex.org/W2117179803","https://openalex.org/W2117275660","https://openalex.org/W2117931575","https://openalex.org/W2120113938","https://openalex.org/W2121400889","https://openalex.org/W2122199548","https://openalex.org/W2127522551","https://openalex.org/W2134059200","https://openalex.org/W2136988777","https://openalex.org/W2138654920","https://openalex.org/W2141362320","https://openalex.org/W2149655632","https://openalex.org/W2154192340","https://openalex.org/W2162156855","https://openalex.org/W2170506864","https://openalex.org/W2187283083","https://openalex.org/W2202710059","https://openalex.org/W2213268248","https://openalex.org/W2230728100","https://openalex.org/W2241089358","https://openalex.org/W2249245649","https://openalex.org/W2260580338","https://openalex.org/W2289084400","https://openalex.org/W2313671987","https://openalex.org/W2315961248","https://openalex.org/W2316011606","https://openalex.org/W2323178299","https://openalex.org/W2342454398","https://openalex.org/W2345354812","https://openalex.org/W2397547384","https://openalex.org/W2413334978","https://openalex.org/W2469449201","https://openalex.org/W2479768743","https://openalex.org/W2507479832","https://openalex.org/W2520646257","https://openalex.org/W2530960271","https://openalex.org/W2550887636","https://openalex.org/W2590060396","https://openalex.org/W2610740470","https://openalex.org/W2622702362","https://openalex.org/W2735893767","https://openalex.org/W2738606079","https://openalex.org/W2751784785","https://openalex.org/W2769882797","https://openalex.org/W2782369838","https://openalex.org/W2783073729","https://openalex.org/W2783744484","https://openalex.org/W2790441008","https://openalex.org/W2797071919","https://openalex.org/W2807026108","https://openalex.org/W2808705139","https://openalex.org/W2890238694","https://openalex.org/W2892745578","https://openalex.org/W2895149839","https://openalex.org/W2902556395","https://openalex.org/W2903091331","https://openalex.org/W2906138391","https://openalex.org/W2914490422","https://openalex.org/W2923759574","https://openalex.org/W2939975123","https://openalex.org/W2948526042","https://openalex.org/W2948671659","https://openalex.org/W2953085814","https://openalex.org/W2953354214","https://openalex.org/W2966619335","https://openalex.org/W2968426314","https://openalex.org/W2969072345","https://openalex.org/W2974593196","https://openalex.org/W2987451562","https://openalex.org/W2988055229","https://openalex.org/W2999044305","https://openalex.org/W2999730930","https://openalex.org/W3004751286","https://openalex.org/W3005892601","https://openalex.org/W3007221501","https://openalex.org/W3008007436","https://openalex.org/W3011701533","https://openalex.org/W3014714014","https://openalex.org/W3015444032","https://openalex.org/W3037532095","https://openalex.org/W3045130610","https://openalex.org/W3083738960","https://openalex.org/W3087156149","https://openalex.org/W3088579397","https://openalex.org/W3088807402","https://openalex.org/W3094238769","https://openalex.org/W3098321015","https://openalex.org/W3101739927","https://openalex.org/W3102591464","https://openalex.org/W3102679581","https://openalex.org/W3105259316","https://openalex.org/W3106674684","https://openalex.org/W3107939614","https://openalex.org/W3108943181","https://openalex.org/W3113182646","https://openalex.org/W3120407713","https://openalex.org/W3132399743","https://openalex.org/W3199799076","https://openalex.org/W3203992401","https://openalex.org/W4206677916","https://openalex.org/W4211262102","https://openalex.org/W4242519044"],"related_works":["https://openalex.org/W2410491632","https://openalex.org/W2506070082","https://openalex.org/W2109742611","https://openalex.org/W3121998239","https://openalex.org/W3211295480","https://openalex.org/W2921849823","https://openalex.org/W2937831315","https://openalex.org/W2005944470","https://openalex.org/W2087337471","https://openalex.org/W4353084618"],"abstract_inverted_index":{"The":[0,23,85],"biomolecular":[1,32,88],"modeling":[2,89],"field":[3,56,86],"has":[4,34,90],"flourished":[5],"since":[6],"its":[7],"early":[8],"days":[9],"in":[10,27,53],"the":[11,15,41,55,100,108],"1970s":[12],"due":[13],"to":[14,78],"rapid":[16,59],"adaptation":[17,60],"and":[18,29,48,61,72,82,104,107,110,114,119],"tailoring":[19],"of":[20,31,43,87,102],"state-of-the-art":[21,94],"technology.":[22],"resulting":[24],"dramatic":[25],"increase":[26],"size":[28],"timespan":[30],"simulations":[33],"outpaced":[35],"Moore\u2019s":[36],"law.":[37],"Here,":[38],"we":[39],"discuss":[40],"role":[42,101],"knowledge-based":[44,113],"versus":[45,50],"physics-based":[46,115],"methods":[47,116],"hardware":[49,105],"software":[51,103],"advances":[52],"propelling":[54],"forward.":[57],"This":[58],"outreach":[62],"suggests":[63],"a":[64],"bright":[65],"future":[66,80],"for":[67],"modeling,":[68],"where":[69],"theory,":[70],"experimentation":[71],"simulation":[73],"define":[74],"three":[75],"pillars":[76],"needed":[77],"address":[79],"scientific":[81],"biomedical":[83],"challenges.":[84],"thrived":[91],"by":[92],"exploiting":[93],"technological":[95],"advances.":[96],"In":[97],"this":[98],"Perspective,":[99],"advances,":[106],"disparity":[109],"synergy":[111],"between":[112],"are":[117],"discussed":[118],"explored.":[120]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":18},{"year":2024,"cited_by_count":29},{"year":2023,"cited_by_count":22},{"year":2022,"cited_by_count":27},{"year":2021,"cited_by_count":12}],"updated_date":"2026-05-16T08:24:45.110214","created_date":"2025-10-10T00:00:00"}
