{"id":"https://openalex.org/W4406916847","doi":"https://doi.org/10.1038/s42256-024-00973-w","title":"A unified cross-attention model for predicting antigen binding specificity to both HLA and TCR molecules","display_name":"A unified cross-attention model for predicting antigen binding specificity to both HLA and TCR molecules","publication_year":2025,"publication_date":"2025-01-28","ids":{"openalex":"https://openalex.org/W4406916847","doi":"https://doi.org/10.1038/s42256-024-00973-w"},"language":"en","primary_location":{"id":"doi:10.1038/s42256-024-00973-w","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s42256-024-00973-w","pdf_url":null,"source":{"id":"https://openalex.org/S2912241403","display_name":"Nature Machine Intelligence","issn_l":"2522-5839","issn":["2522-5839"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Machine Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5104298204","display_name":"Chenpeng Yu","orcid":null},"institutions":[{"id":"https://openalex.org/I134687103","display_name":"Nanjing Tech University","ror":"https://ror.org/03sd35x91","country_code":"CN","type":"education","lineage":["https://openalex.org/I134687103"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Chenpeng Yu","raw_affiliation_strings":["College of Computer and Information Engineering, Nanjing Tech University, Nanjing, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Information Engineering, Nanjing Tech University, Nanjing, China","institution_ids":["https://openalex.org/I134687103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102871890","display_name":"Xing Fang","orcid":"https://orcid.org/0000-0002-1801-6831"},"institutions":[{"id":"https://openalex.org/I134687103","display_name":"Nanjing Tech University","ror":"https://ror.org/03sd35x91","country_code":"CN","type":"education","lineage":["https://openalex.org/I134687103"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xing Fang","raw_affiliation_strings":["College of Computer and Information Engineering, Nanjing Tech University, Nanjing, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Information Engineering, Nanjing Tech University, Nanjing, China","institution_ids":["https://openalex.org/I134687103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113266694","display_name":"Shiye Tian","orcid":null},"institutions":[{"id":"https://openalex.org/I134687103","display_name":"Nanjing Tech University","ror":"https://ror.org/03sd35x91","country_code":"CN","type":"education","lineage":["https://openalex.org/I134687103"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shiye Tian","raw_affiliation_strings":["College of Computer and Information Engineering, Nanjing Tech University, Nanjing, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Information Engineering, Nanjing Tech University, Nanjing, China","institution_ids":["https://openalex.org/I134687103"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100387512","display_name":"Hui Liu","orcid":"https://orcid.org/0000-0001-7158-913X"},"institutions":[{"id":"https://openalex.org/I134687103","display_name":"Nanjing Tech University","ror":"https://ror.org/03sd35x91","country_code":"CN","type":"education","lineage":["https://openalex.org/I134687103"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hui Liu","raw_affiliation_strings":["College of Computer and Information Engineering, Nanjing Tech University, Nanjing, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Information Engineering, Nanjing Tech University, Nanjing, China","institution_ids":["https://openalex.org/I134687103"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5104298204"],"corresponding_institution_ids":["https://openalex.org/I134687103"],"apc_list":{"value":9750,"currency":"EUR","value_usd":11690},"apc_paid":null,"fwci":9.6876,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.98287991,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"7","issue":"2","first_page":"278","last_page":"292"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10580","display_name":"Immunotherapy and Immune Responses","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/human-leukocyte-antigen","display_name":"Human leukocyte antigen","score":0.7118405103683472},{"id":"https://openalex.org/keywords/t-cell-receptor","display_name":"T-cell receptor","score":0.6156758666038513},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.5369104743003845},{"id":"https://openalex.org/keywords/antigen","display_name":"Antigen","score":0.4846937954425812},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.32982710003852844},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2777918577194214},{"id":"https://openalex.org/keywords/t-cell","display_name":"T cell","score":0.22990578413009644},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.14469313621520996}],"concepts":[{"id":"https://openalex.org/C188280979","wikidata":"https://www.wikidata.org/wiki/Q911125","display_name":"Human leukocyte antigen","level":3,"score":0.7118405103683472},{"id":"https://openalex.org/C19317047","wikidata":"https://www.wikidata.org/wiki/Q412037","display_name":"T-cell receptor","level":4,"score":0.6156758666038513},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.5369104743003845},{"id":"https://openalex.org/C147483822","wikidata":"https://www.wikidata.org/wiki/Q103537","display_name":"Antigen","level":2,"score":0.4846937954425812},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32982710003852844},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2777918577194214},{"id":"https://openalex.org/C2776090121","wikidata":"https://www.wikidata.org/wiki/Q193529","display_name":"T cell","level":3,"score":0.22990578413009644},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.14469313621520996}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1038/s42256-024-00973-w","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s42256-024-00973-w","pdf_url":null,"source":{"id":"https://openalex.org/S2912241403","display_name":"Nature Machine Intelligence","issn_l":"2522-5839","issn":["2522-5839"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Machine Intelligence","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.49000000953674316,"id":"https://metadata.un.org/sdg/2"}],"awards":[{"id":"https://openalex.org/G3638561661","display_name":null,"funder_award_id":"62072058","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5232981075","display_name":null,"funder_award_id":"62372229","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":82,"referenced_works":["https://openalex.org/W1516591549","https://openalex.org/W1533163141","https://openalex.org/W1572252257","https://openalex.org/W1661402929","https://openalex.org/W1964823826","https://openalex.org/W1973983282","https://openalex.org/W1994048581","https://openalex.org/W1994993231","https://openalex.org/W2000305183","https://openalex.org/W2009271567","https://openalex.org/W2011458181","https://openalex.org/W2016899885","https://openalex.org/W2019711015","https://openalex.org/W2031011895","https://openalex.org/W2048365448","https://openalex.org/W2089543767","https://openalex.org/W2097398162","https://openalex.org/W2102561055","https://openalex.org/W2107429737","https://openalex.org/W2110574412","https://openalex.org/W2110694683","https://openalex.org/W2121626779","https://openalex.org/W2134378878","https://openalex.org/W2150383532","https://openalex.org/W2154509769","https://openalex.org/W2163660115","https://openalex.org/W2204695023","https://openalex.org/W2271914738","https://openalex.org/W2409761064","https://openalex.org/W2471645096","https://openalex.org/W2605177850","https://openalex.org/W2613978126","https://openalex.org/W2670890989","https://openalex.org/W2743893844","https://openalex.org/W2761575992","https://openalex.org/W2766169371","https://openalex.org/W2898389621","https://openalex.org/W2899327929","https://openalex.org/W2941612414","https://openalex.org/W2941709580","https://openalex.org/W2945679805","https://openalex.org/W2949635314","https://openalex.org/W2949949116","https://openalex.org/W2959124424","https://openalex.org/W2965921152","https://openalex.org/W2968849363","https://openalex.org/W2979330275","https://openalex.org/W2988620928","https://openalex.org/W3021864086","https://openalex.org/W3024570138","https://openalex.org/W3034309744","https://openalex.org/W3049464942","https://openalex.org/W3078644326","https://openalex.org/W3083225904","https://openalex.org/W3087255036","https://openalex.org/W3087683890","https://openalex.org/W3091991776","https://openalex.org/W3122375914","https://openalex.org/W3129412675","https://openalex.org/W3129998112","https://openalex.org/W3146944767","https://openalex.org/W3160420762","https://openalex.org/W3163602801","https://openalex.org/W3166730506","https://openalex.org/W3196225703","https://openalex.org/W3198677380","https://openalex.org/W3198942356","https://openalex.org/W4205773061","https://openalex.org/W4220655797","https://openalex.org/W4223964264","https://openalex.org/W4295242625","https://openalex.org/W4317037527","https://openalex.org/W4318071656","https://openalex.org/W4319159750","https://openalex.org/W4319455163","https://openalex.org/W4323320132","https://openalex.org/W4380885942","https://openalex.org/W4387378658","https://openalex.org/W4389613097","https://openalex.org/W4406259932","https://openalex.org/W6739901393","https://openalex.org/W6968076241"],"related_works":["https://openalex.org/W2394822632","https://openalex.org/W1996773663","https://openalex.org/W2169237989","https://openalex.org/W2168728330","https://openalex.org/W4387220683","https://openalex.org/W3018227732","https://openalex.org/W2325840399","https://openalex.org/W4319936563","https://openalex.org/W2007605965","https://openalex.org/W2414745257"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":7}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
