{"id":"https://openalex.org/W4402666674","doi":"https://doi.org/10.1038/s42256-024-00887-7","title":"Zero-shot transfer of protein sequence likelihood models to thermostability prediction","display_name":"Zero-shot transfer of protein sequence likelihood models to thermostability prediction","publication_year":2024,"publication_date":"2024-09-20","ids":{"openalex":"https://openalex.org/W4402666674","doi":"https://doi.org/10.1038/s42256-024-00887-7"},"language":"en","primary_location":{"id":"doi:10.1038/s42256-024-00887-7","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s42256-024-00887-7","pdf_url":null,"source":{"id":"https://openalex.org/S2912241403","display_name":"Nature Machine Intelligence","issn_l":"2522-5839","issn":["2522-5839"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Machine Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007448876","display_name":"Shawn Reeves","orcid":"https://orcid.org/0009-0004-8560-5021"},"institutions":[{"id":"https://openalex.org/I151746483","display_name":"University of Waterloo","ror":"https://ror.org/01aff2v68","country_code":"CA","type":"education","lineage":["https://openalex.org/I151746483"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Shawn Reeves","raw_affiliation_strings":["University of Waterloo, Department of Chemistry, Waterloo, Ontario, Canada"],"raw_orcid":"https://orcid.org/0009-0004-8560-5021","affiliations":[{"raw_affiliation_string":"University of Waterloo, Department of Chemistry, Waterloo, Ontario, Canada","institution_ids":["https://openalex.org/I151746483"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004613714","display_name":"Subha Kalyaanamoorthy","orcid":"https://orcid.org/0000-0003-0854-6449"},"institutions":[{"id":"https://openalex.org/I151746483","display_name":"University of Waterloo","ror":"https://ror.org/01aff2v68","country_code":"CA","type":"education","lineage":["https://openalex.org/I151746483"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Subha Kalyaanamoorthy","raw_affiliation_strings":["University of Waterloo, Department of Chemistry, Waterloo, Ontario, Canada","Waterloo Artificial Intelligence Institute, University of Waterloo, Waterloo, Ontario, Canada","Waterloo Institute of Nanotechnology, University of Waterloo, Waterloo, Ontario, Canada"],"raw_orcid":"https://orcid.org/0000-0003-0854-6449","affiliations":[{"raw_affiliation_string":"University of Waterloo, Department of Chemistry, Waterloo, Ontario, Canada","institution_ids":["https://openalex.org/I151746483"]},{"raw_affiliation_string":"Waterloo Artificial Intelligence Institute, University of Waterloo, Waterloo, Ontario, Canada","institution_ids":["https://openalex.org/I151746483"]},{"raw_affiliation_string":"Waterloo Institute of Nanotechnology, University of Waterloo, Waterloo, Ontario, Canada","institution_ids":["https://openalex.org/I151746483"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5004613714"],"corresponding_institution_ids":["https://openalex.org/I151746483"],"apc_list":{"value":11690,"currency":"USD","value_usd":11690},"apc_paid":null,"fwci":2.5251,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.90310413,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"6","issue":"9","first_page":"1063","last_page":"1076"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/thermostability","display_name":"Thermostability","score":0.9446747899055481},{"id":"https://openalex.org/keywords/zero","display_name":"Zero (linguistics)","score":0.5232540369033813},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4558280110359192},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.25043612718582153},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.08239006996154785}],"concepts":[{"id":"https://openalex.org/C2781216036","wikidata":"https://www.wikidata.org/wiki/Q902494","display_name":"Thermostability","level":3,"score":0.9446747899055481},{"id":"https://openalex.org/C2780813799","wikidata":"https://www.wikidata.org/wiki/Q3274237","display_name":"Zero (linguistics)","level":2,"score":0.5232540369033813},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4558280110359192},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.25043612718582153},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.08239006996154785},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1038/s42256-024-00887-7","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s42256-024-00887-7","pdf_url":null,"source":{"id":"https://openalex.org/S2912241403","display_name":"Nature Machine Intelligence","issn_l":"2522-5839","issn":["2522-5839"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Machine Intelligence","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Climate action","score":0.5199999809265137,"id":"https://metadata.un.org/sdg/13"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":51,"referenced_works":["https://openalex.org/W1607931568","https://openalex.org/W2008708467","https://openalex.org/W2031553026","https://openalex.org/W2089085945","https://openalex.org/W2103385859","https://openalex.org/W2145317354","https://openalex.org/W2172034373","https://openalex.org/W2245592118","https://openalex.org/W2428593791","https://openalex.org/W2560647685","https://openalex.org/W2606439133","https://openalex.org/W2734498408","https://openalex.org/W2734861826","https://openalex.org/W2782655885","https://openalex.org/W2794503008","https://openalex.org/W2917580301","https://openalex.org/W2955704392","https://openalex.org/W2956569764","https://openalex.org/W2967474035","https://openalex.org/W2972411752","https://openalex.org/W2985863607","https://openalex.org/W3015921770","https://openalex.org/W3022117139","https://openalex.org/W3045100294","https://openalex.org/W3092344367","https://openalex.org/W3104081477","https://openalex.org/W3133458480","https://openalex.org/W3134185574","https://openalex.org/W3144239152","https://openalex.org/W3156303331","https://openalex.org/W3179485843","https://openalex.org/W3194401934","https://openalex.org/W3214131546","https://openalex.org/W4206007286","https://openalex.org/W4206087583","https://openalex.org/W4206117801","https://openalex.org/W4206948363","https://openalex.org/W4221090435","https://openalex.org/W4223581484","https://openalex.org/W4255594044","https://openalex.org/W4281648132","https://openalex.org/W4296032638","https://openalex.org/W4315620405","https://openalex.org/W4317374308","https://openalex.org/W4327550249","https://openalex.org/W4366392978","https://openalex.org/W4384820649","https://openalex.org/W4387966974","https://openalex.org/W4392549818","https://openalex.org/W4400921915","https://openalex.org/W6892839951"],"related_works":["https://openalex.org/W2094336165","https://openalex.org/W2362777130","https://openalex.org/W4295102914","https://openalex.org/W2508856013","https://openalex.org/W2898594562","https://openalex.org/W2373154855","https://openalex.org/W4380880189","https://openalex.org/W2167611972","https://openalex.org/W2358124487","https://openalex.org/W2376504035"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":1}],"updated_date":"2026-08-12T07:12:00.856984","created_date":"2025-10-10T00:00:00"}
