{"id":"https://openalex.org/W4401585044","doi":"https://doi.org/10.1038/s42256-024-00876-w","title":"A bioactivity foundation model using pairwise meta-learning","display_name":"A bioactivity foundation model using pairwise meta-learning","publication_year":2024,"publication_date":"2024-08-14","ids":{"openalex":"https://openalex.org/W4401585044","doi":"https://doi.org/10.1038/s42256-024-00876-w"},"language":"en","primary_location":{"id":"doi:10.1038/s42256-024-00876-w","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s42256-024-00876-w","pdf_url":null,"source":{"id":"https://openalex.org/S2912241403","display_name":"Nature Machine Intelligence","issn_l":"2522-5839","issn":["2522-5839"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Machine Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103040713","display_name":"Bin Feng","orcid":"https://orcid.org/0000-0003-1467-4025"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Feng","raw_affiliation_strings":["INF Technology (Shanghai) Co. Ltd, Shanghai, China","School of Computer Science, State Key Laboratory of Multimedia Information Processing, Peking University-Anker Embodied AI Lab, Peking University, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INF Technology (Shanghai) Co. Ltd, Shanghai, China","institution_ids":[]},{"raw_affiliation_string":"School of Computer Science, State Key Laboratory of Multimedia Information Processing, Peking University-Anker Embodied AI Lab, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005604308","display_name":"Zequn Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zequn Liu","raw_affiliation_strings":["School of Computer Science, State Key Laboratory of Multimedia Information Processing, Peking University-Anker Embodied AI Lab, Peking University, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, State Key Laboratory of Multimedia Information Processing, Peking University-Anker Embodied AI Lab, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012023501","display_name":"Nan-Lan Huang","orcid":"https://orcid.org/0000-0003-2739-3767"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Nanlan Huang","raw_affiliation_strings":["INF Technology (Shanghai) Co. Ltd, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0003-2739-3767","affiliations":[{"raw_affiliation_string":"INF Technology (Shanghai) Co. Ltd, Shanghai, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049472306","display_name":"Zhiping Xiao","orcid":"https://orcid.org/0000-0002-8583-4789"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhiping Xiao","raw_affiliation_strings":["Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, WA, USA"],"raw_orcid":"https://orcid.org/0000-0002-8583-4789","affiliations":[{"raw_affiliation_string":"Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010206045","display_name":"Haomiao Zhang","orcid":"https://orcid.org/0000-0001-7933-3155"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Haomiao Zhang","raw_affiliation_strings":["INF Technology (Shanghai) Co. Ltd, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INF Technology (Shanghai) Co. Ltd, Shanghai, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111067279","display_name":"Srbuhi Mirzoyan","orcid":null},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Srbuhi Mirzoyan","raw_affiliation_strings":["School of Computer Science, State Key Laboratory of Multimedia Information Processing, Peking University-Anker Embodied AI Lab, Peking University, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, State Key Laboratory of Multimedia Information Processing, Peking University-Anker Embodied AI Lab, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069634574","display_name":"Hanwen Xu","orcid":"https://orcid.org/0000-0003-4865-7071"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hanwen Xu","raw_affiliation_strings":["Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, WA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109667048","display_name":"Jiaran Hao","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jiaran Hao","raw_affiliation_strings":["INF Technology (Shanghai) Co. Ltd, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INF Technology (Shanghai) Co. Ltd, Shanghai, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100579456","display_name":"Yinghui Xu","orcid":"https://orcid.org/0009-0002-7346-2794"},"institutions":[{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yinghui Xu","raw_affiliation_strings":["Artificial Intelligence Innovation and Incubation Institute, Fudan University, Shanghai, China","INF Technology (Shanghai) Co. Ltd, Shanghai, China"],"raw_orcid":"https://orcid.org/0009-0002-7346-2794","affiliations":[{"raw_affiliation_string":"Artificial Intelligence Innovation and Incubation Institute, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]},{"raw_affiliation_string":"INF Technology (Shanghai) Co. Ltd, Shanghai, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100642537","display_name":"Ming Zhang","orcid":"https://orcid.org/0000-0002-9809-3430"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ming Zhang","raw_affiliation_strings":["School of Computer Science, State Key Laboratory of Multimedia Information Processing, Peking University-Anker Embodied AI Lab, Peking University, Beijing, China"],"raw_orcid":"https://orcid.org/0000-0002-9809-3430","affiliations":[{"raw_affiliation_string":"School of Computer Science, State Key Laboratory of Multimedia Information Processing, Peking University-Anker Embodied AI Lab, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048356362","display_name":"Sheng Wang","orcid":"https://orcid.org/0000-0002-0439-5199"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sheng Wang","raw_affiliation_strings":["Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, WA, USA"],"raw_orcid":"https://orcid.org/0000-0002-0439-5199","affiliations":[{"raw_affiliation_string":"Paul G. Allen School of Computer Science and Engineering, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5100579456"],"corresponding_institution_ids":["https://openalex.org/I24943067"],"apc_list":{"value":9750,"currency":"EUR","value_usd":11690},"apc_paid":null,"fwci":7.6054,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":{"value":0.97828181,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"6","issue":"8","first_page":"962","last_page":"974"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9894999861717224,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11663","display_name":"Viral Infectious Diseases and Gene Expression in Insects","score":0.968500018119812,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chembl","display_name":"chEMBL","score":0.8826833963394165},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.7801347970962524},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.6906270980834961},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6883020997047424},{"id":"https://openalex.org/keywords/generalizability-theory","display_name":"Generalizability theory","score":0.5960508584976196},{"id":"https://openalex.org/keywords/generalization","display_name":"Generalization","score":0.594536542892456},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5933722853660583},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.5386974215507507},{"id":"https://openalex.org/keywords/foundation","display_name":"Foundation (evidence)","score":0.4897148907184601},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3496207594871521},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22375056147575378},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.21300619840621948},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18834102153778076}],"concepts":[{"id":"https://openalex.org/C63222358","wikidata":"https://www.wikidata.org/wiki/Q6120337","display_name":"chEMBL","level":3,"score":0.8826833963394165},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.7801347970962524},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.6906270980834961},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6883020997047424},{"id":"https://openalex.org/C27158222","wikidata":"https://www.wikidata.org/wiki/Q5532422","display_name":"Generalizability theory","level":2,"score":0.5960508584976196},{"id":"https://openalex.org/C177148314","wikidata":"https://www.wikidata.org/wiki/Q170084","display_name":"Generalization","level":2,"score":0.594536542892456},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5933722853660583},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.5386974215507507},{"id":"https://openalex.org/C2780966255","wikidata":"https://www.wikidata.org/wiki/Q5474306","display_name":"Foundation (evidence)","level":2,"score":0.4897148907184601},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3496207594871521},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22375056147575378},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.21300619840621948},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18834102153778076},{"id":"https://openalex.org/C95457728","wikidata":"https://www.wikidata.org/wiki/Q309","display_name":"History","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C166957645","wikidata":"https://www.wikidata.org/wiki/Q23498","display_name":"Archaeology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1038/s42256-024-00876-w","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s42256-024-00876-w","pdf_url":null,"source":{"id":"https://openalex.org/S2912241403","display_name":"Nature Machine Intelligence","issn_l":"2522-5839","issn":["2522-5839"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Machine Intelligence","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":76,"referenced_works":["https://openalex.org/W1677182931","https://openalex.org/W1910508441","https://openalex.org/W1988037271","https://openalex.org/W2011606734","https://openalex.org/W2025006523","https://openalex.org/W2035585923","https://openalex.org/W2081301924","https://openalex.org/W2086286404","https://openalex.org/W2088252378","https://openalex.org/W2096541451","https://openalex.org/W2096864392","https://openalex.org/W2108068107","https://openalex.org/W2117620409","https://openalex.org/W2154670681","https://openalex.org/W2319057313","https://openalex.org/W2565684601","https://openalex.org/W2582187633","https://openalex.org/W2594183968","https://openalex.org/W2755098789","https://openalex.org/W2781821160","https://openalex.org/W2784213390","https://openalex.org/W2785947426","https://openalex.org/W2789796452","https://openalex.org/W2899788782","https://openalex.org/W2911964244","https://openalex.org/W2937307539","https://openalex.org/W2952635193","https://openalex.org/W2972499938","https://openalex.org/W2973114758","https://openalex.org/W2974531988","https://openalex.org/W2980863799","https://openalex.org/W2999554466","https://openalex.org/W3004604833","https://openalex.org/W3010761615","https://openalex.org/W3014351048","https://openalex.org/W3054319032","https://openalex.org/W3092524006","https://openalex.org/W3095883070","https://openalex.org/W3096561213","https://openalex.org/W3098189759","https://openalex.org/W3109916301","https://openalex.org/W3133444990","https://openalex.org/W3135367836","https://openalex.org/W3167019654","https://openalex.org/W3181995918","https://openalex.org/W3189831819","https://openalex.org/W3191081593","https://openalex.org/W3209340662","https://openalex.org/W3212042276","https://openalex.org/W4200139236","https://openalex.org/W4200547951","https://openalex.org/W4205167309","https://openalex.org/W4205821112","https://openalex.org/W4211219865","https://openalex.org/W4223419210","https://openalex.org/W4225289163","https://openalex.org/W4226278401","https://openalex.org/W4282017563","https://openalex.org/W4294875307","https://openalex.org/W4311436943","https://openalex.org/W4313485929","https://openalex.org/W4323304388","https://openalex.org/W4360836968","https://openalex.org/W4361247736","https://openalex.org/W4365455552","https://openalex.org/W4386287987","https://openalex.org/W4386766213","https://openalex.org/W4387639561","https://openalex.org/W4387772754","https://openalex.org/W4388035751","https://openalex.org/W4394234861","https://openalex.org/W6752040014","https://openalex.org/W6778883912","https://openalex.org/W6801873680","https://openalex.org/W6889011914","https://openalex.org/W6930394044"],"related_works":["https://openalex.org/W2800402488","https://openalex.org/W2118717649","https://openalex.org/W2413243053","https://openalex.org/W2155478691","https://openalex.org/W410723623","https://openalex.org/W2015341305","https://openalex.org/W3005441379","https://openalex.org/W2167883292","https://openalex.org/W4321254242","https://openalex.org/W4385760073"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":15},{"year":2024,"cited_by_count":1}],"updated_date":"2026-01-26T23:06:41.788003","created_date":"2025-10-10T00:00:00"}
