{"id":"https://openalex.org/W3164743754","doi":"https://doi.org/10.1038/s42256-021-00407-x","title":"A deep generative model enables automated structure elucidation of novel psychoactive substances","display_name":"A deep generative model enables automated structure elucidation of novel psychoactive substances","publication_year":2021,"publication_date":"2021-11-15","ids":{"openalex":"https://openalex.org/W3164743754","doi":"https://doi.org/10.1038/s42256-021-00407-x","mag":"3164743754"},"language":"en","primary_location":{"id":"doi:10.1038/s42256-021-00407-x","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s42256-021-00407-x","pdf_url":null,"source":{"id":"https://openalex.org/S2912241403","display_name":"Nature Machine Intelligence","issn_l":"2522-5839","issn":["2522-5839"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Machine Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045701956","display_name":"Michael A. Skinnider","orcid":"https://orcid.org/0000-0002-2168-1621"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I4210133112","display_name":"Canada's Michael Smith Genome Sciences Centre","ror":"https://ror.org/0333j0897","country_code":"CA","type":"other","lineage":["https://openalex.org/I4210133112"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Michael A. Skinnider","raw_affiliation_strings":["Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada","Michael Smith Laboratories, University of British Columbia, Vancouver, Canada"],"raw_orcid":"https://orcid.org/0000-0002-2168-1621","affiliations":[{"raw_affiliation_string":"Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada","institution_ids":["https://openalex.org/I141945490","https://openalex.org/I4210133112"]},{"raw_affiliation_string":"Michael Smith Laboratories, University of British Columbia, Vancouver, Canada","institution_ids":["https://openalex.org/I141945490","https://openalex.org/I4210133112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100455714","display_name":"Fei Wang","orcid":"https://orcid.org/0000-0001-5890-0448"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Fei Wang","raw_affiliation_strings":["Alberta Machine Intelligence Institute, Edmonton, Alberta, Canada","Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada","Alberta Machine Intelligence Institute, Edmonton, Canada","Department of Computing Science, University of Alberta, Edmonton, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Alberta Machine Intelligence Institute, Edmonton, Alberta, Canada","institution_ids":[]},{"raw_affiliation_string":"Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Alberta Machine Intelligence Institute, Edmonton, Canada","institution_ids":[]},{"raw_affiliation_string":"Department of Computing Science, University of Alberta, Edmonton, Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048646754","display_name":"Daniel Pasin","orcid":"https://orcid.org/0000-0002-5037-7290"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Daniel Pasin","raw_affiliation_strings":["Section of Forensic Chemistry, Department of Forensic Medicine, University of Copenhagen, Copenhagen, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Section of Forensic Chemistry, Department of Forensic Medicine, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027200864","display_name":"Russell Greiner","orcid":"https://orcid.org/0000-0001-8327-934X"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Russell Greiner","raw_affiliation_strings":["Alberta Machine Intelligence Institute, Edmonton, Alberta, Canada","Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada","Alberta Machine Intelligence Institute, Edmonton, Canada","Department of Computing Science, University of Alberta, Edmonton, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Alberta Machine Intelligence Institute, Edmonton, Alberta, Canada","institution_ids":[]},{"raw_affiliation_string":"Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Alberta Machine Intelligence Institute, Edmonton, Canada","institution_ids":[]},{"raw_affiliation_string":"Department of Computing Science, University of Alberta, Edmonton, Canada","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044695259","display_name":"Leonard J. Foster","orcid":"https://orcid.org/0000-0001-8551-4817"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]},{"id":"https://openalex.org/I4210133112","display_name":"Canada's Michael Smith Genome Sciences Centre","ror":"https://ror.org/0333j0897","country_code":"CA","type":"other","lineage":["https://openalex.org/I4210133112"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Leonard J. Foster","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada","Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada","Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, Canada","Michael Smith Laboratories, University of British Columbia, Vancouver, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, British Columbia, Canada","institution_ids":["https://openalex.org/I141945490"]},{"raw_affiliation_string":"Michael Smith Laboratories, University of British Columbia, Vancouver, British Columbia, Canada","institution_ids":["https://openalex.org/I141945490","https://openalex.org/I4210133112"]},{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, Canada","institution_ids":["https://openalex.org/I141945490"]},{"raw_affiliation_string":"Michael Smith Laboratories, University of British Columbia, Vancouver, Canada","institution_ids":["https://openalex.org/I141945490","https://openalex.org/I4210133112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088992462","display_name":"Petur Weihe Dalsgaard","orcid":"https://orcid.org/0000-0002-8967-7477"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Petur W. Dalsgaard","raw_affiliation_strings":["Section of Forensic Chemistry, Department of Forensic Medicine, University of Copenhagen, Copenhagen, Denmark"],"raw_orcid":"https://orcid.org/0000-0002-8967-7477","affiliations":[{"raw_affiliation_string":"Section of Forensic Chemistry, Department of Forensic Medicine, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003573061","display_name":"David S. Wishart","orcid":"https://orcid.org/0000-0002-3207-2434"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA","US"],"is_corresponding":true,"raw_author_name":"David S. Wishart","raw_affiliation_strings":["Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA","Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada","Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada","Department of Laboratory Medicine and Pathology, University of Alberta, Edmonton, Alberta, Canada","Faculty of Pharmacy and Pharmaceutical Sciences, University of Alberta, Edmonton, Alberta, Canada","Biological Sciences Division, Pacific Northwest National Laboratory, Richland, USA","Department of Biological Sciences, University of Alberta, Edmonton, Canada","Department of Computing Science, University of Alberta, Edmonton, Canada","Department of Laboratory Medicine and Pathology, University of Alberta, Edmonton, Canada","Faculty of Pharmacy and Pharmaceutical Sciences, University of Alberta, Edmonton, Canada"],"raw_orcid":"https://orcid.org/0000-0002-3207-2434","affiliations":[{"raw_affiliation_string":"Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA","institution_ids":["https://openalex.org/I142606810"]},{"raw_affiliation_string":"Department of Biological Sciences, University of Alberta, Edmonton, Alberta, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Department of Computing Science, University of Alberta, Edmonton, Alberta, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Department of Laboratory Medicine and Pathology, University of Alberta, Edmonton, Alberta, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Faculty of Pharmacy and Pharmaceutical Sciences, University of Alberta, Edmonton, Alberta, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Biological Sciences Division, Pacific Northwest National Laboratory, Richland, USA","institution_ids":["https://openalex.org/I142606810"]},{"raw_affiliation_string":"Department of Biological Sciences, University of Alberta, Edmonton, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Department of Computing Science, University of Alberta, Edmonton, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Department of Laboratory Medicine and Pathology, University of Alberta, Edmonton, Canada","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Faculty of Pharmacy and Pharmaceutical Sciences, University of Alberta, Edmonton, Canada","institution_ids":["https://openalex.org/I154425047"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5003573061","https://openalex.org/A5045701956"],"corresponding_institution_ids":["https://openalex.org/I141945490","https://openalex.org/I142606810","https://openalex.org/I154425047","https://openalex.org/I4210133112"],"apc_list":{"value":11690,"currency":"USD","value_usd":11690},"apc_paid":null,"fwci":7.0018,"has_fulltext":true,"cited_by_count":87,"citation_normalized_percentile":{"value":0.97515633,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"3","issue":"11","first_page":"973","last_page":"984"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9912999868392944,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10908","display_name":"Analytical Chemistry and Chromatography","score":0.9416000247001648,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/generative-grammar","display_name":"Generative grammar","score":0.44488412141799927},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3832167685031891},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.3777811825275421},{"id":"https://openalex.org/keywords/traditional-medicine","display_name":"Traditional medicine","score":0.35767248272895813},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3398890197277069},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2749270498752594}],"concepts":[{"id":"https://openalex.org/C39890363","wikidata":"https://www.wikidata.org/wiki/Q36108","display_name":"Generative grammar","level":2,"score":0.44488412141799927},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3832167685031891},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.3777811825275421},{"id":"https://openalex.org/C556039675","wikidata":"https://www.wikidata.org/wiki/Q771035","display_name":"Traditional medicine","level":1,"score":0.35767248272895813},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3398890197277069},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2749270498752594}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1038/s42256-021-00407-x","is_oa":false,"landing_page_url":"https://doi.org/10.1038/s42256-021-00407-x","pdf_url":null,"source":{"id":"https://openalex.org/S2912241403","display_name":"Nature Machine Intelligence","issn_l":"2522-5839","issn":["2522-5839"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature Machine Intelligence","raw_type":"journal-article"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/9913a816-1e79-42fb-99ab-ea3c93fe786c","is_oa":false,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/9913a816-1e79-42fb-99ab-ea3c93fe786c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Skinnider , M A , Wang , F , Pasin , D , Greiner , R , Foster , L J , Dalsgaard , P W & Wishart , D S 2021 , ' A deep generative model enables automated structure elucidation of novel psychoactive substances ' , Nature Machine Intelligence , vol. 3 , no. 11 , pp. 973-984 . https://doi.org/10.1038/s42256-021-00407-x","raw_type":"article"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.5099999904632568,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G1598349242","display_name":null,"funder_award_id":"U2CES030170","funder_id":"https://openalex.org/F4320337361","funder_display_name":"National Institute of Environmental Health Sciences"},{"id":"https://openalex.org/G318970226","display_name":null,"funder_award_id":"284MBO","funder_id":"https://openalex.org/F4320319973","funder_display_name":"Genome British Columbia"},{"id":"https://openalex.org/G5251825543","display_name":null,"funder_award_id":"284MBO","funder_id":"https://openalex.org/F4320326646","funder_display_name":"Genome Alberta"},{"id":"https://openalex.org/G5819774300","display_name":null,"funder_award_id":"284MBO","funder_id":"https://openalex.org/F4320310787","funder_display_name":"Genome Canada"},{"id":"https://openalex.org/G7618577865","display_name":null,"funder_award_id":"U2CES030170","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320306080","display_name":"Foundation for the National Institutes of Health","ror":"https://ror.org/00k86s890"},{"id":"https://openalex.org/F4320310787","display_name":"Genome Canada","ror":"https://ror.org/029s29983"},{"id":"https://openalex.org/F4320314000","display_name":"Compute Canada","ror":"https://ror.org/03ty8yr27"},{"id":"https://openalex.org/F4320319973","display_name":"Genome British Columbia","ror":"https://ror.org/03gne5057"},{"id":"https://openalex.org/F4320326646","display_name":"Genome Alberta","ror":null},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334506","display_name":"Canadian Institutes of Health Research","ror":"https://ror.org/01gavpb45"},{"id":"https://openalex.org/F4320337361","display_name":"National Institute of Environmental Health Sciences","ror":"https://ror.org/00j4k1h63"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":61,"referenced_works":["https://openalex.org/W1142369024","https://openalex.org/W1532405549","https://openalex.org/W1950329032","https://openalex.org/W1969396460","https://openalex.org/W1983230886","https://openalex.org/W1988037271","https://openalex.org/W1991508876","https://openalex.org/W2004487966","https://openalex.org/W2034549041","https://openalex.org/W2060531713","https://openalex.org/W2064963922","https://openalex.org/W2066273100","https://openalex.org/W2068247023","https://openalex.org/W2070072705","https://openalex.org/W2074378176","https://openalex.org/W2076239213","https://openalex.org/W2080266144","https://openalex.org/W2092818812","https://openalex.org/W2115993694","https://openalex.org/W2119512897","https://openalex.org/W2151697120","https://openalex.org/W2160592148","https://openalex.org/W2171602781","https://openalex.org/W2413668155","https://openalex.org/W2472085920","https://openalex.org/W2478294658","https://openalex.org/W2529996553","https://openalex.org/W2563914572","https://openalex.org/W2578240541","https://openalex.org/W2610148085","https://openalex.org/W2616976488","https://openalex.org/W2619627104","https://openalex.org/W2648308082","https://openalex.org/W2745961286","https://openalex.org/W2806185222","https://openalex.org/W2883583109","https://openalex.org/W2887447356","https://openalex.org/W2889326414","https://openalex.org/W2900694120","https://openalex.org/W2901476322","https://openalex.org/W2910542303","https://openalex.org/W2937662637","https://openalex.org/W2945551948","https://openalex.org/W2946046238","https://openalex.org/W2953128081","https://openalex.org/W2964380716","https://openalex.org/W2971690404","https://openalex.org/W2981844663","https://openalex.org/W2989615256","https://openalex.org/W2998974499","https://openalex.org/W3004469522","https://openalex.org/W3011286504","https://openalex.org/W3013297881","https://openalex.org/W3014550317","https://openalex.org/W3094553402","https://openalex.org/W3094686696","https://openalex.org/W3095522316","https://openalex.org/W3098269892","https://openalex.org/W3105963012","https://openalex.org/W3107629351","https://openalex.org/W3185391990"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W3031052312","https://openalex.org/W4389568370","https://openalex.org/W3032375762","https://openalex.org/W1995515455","https://openalex.org/W2080531066","https://openalex.org/W3108674512","https://openalex.org/W1506200166"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":30},{"year":2024,"cited_by_count":20},{"year":2023,"cited_by_count":20},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":5}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
