{"id":"https://openalex.org/W4417240226","doi":"https://doi.org/10.1038/s41746-025-02198-6","title":"AI-driven virtual cell models in preclinical research: technical pathways, validation mechanisms, and clinical translation potential","display_name":"AI-driven virtual cell models in preclinical research: technical pathways, validation mechanisms, and clinical translation potential","publication_year":2025,"publication_date":"2025-12-11","ids":{"openalex":"https://openalex.org/W4417240226","doi":"https://doi.org/10.1038/s41746-025-02198-6","pmid":"https://pubmed.ncbi.nlm.nih.gov/41381900"},"language":"en","primary_location":{"id":"doi:10.1038/s41746-025-02198-6","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41746-025-02198-6","pdf_url":"https://www.nature.com/articles/s41746-025-02198-6_reference.pdf","source":{"id":"https://openalex.org/S4210195431","display_name":"npj Digital Medicine","issn_l":"2398-6352","issn":["2398-6352"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"npj Digital Medicine","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.nature.com/articles/s41746-025-02198-6_reference.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027886643","display_name":"Chunyu Ma","orcid":"https://orcid.org/0000-0001-8240-4655"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]},{"id":"https://openalex.org/I169351748","display_name":"Bengbu Medical College","ror":"https://ror.org/01f8qvj05","country_code":"CN","type":"education","lineage":["https://openalex.org/I169351748"]},{"id":"https://openalex.org/I4210159865","display_name":"Xiangya Hospital Central South University","ror":"https://ror.org/05c1yfj14","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210159865"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chunyu Ma","raw_affiliation_strings":["Department of General Surgery, Xiangya Hospital, Central South University, Changsha, China","The First Clinical Medical College, Bengbu Medical University, Bengbu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Surgery, Xiangya Hospital, Central South University, Changsha, China","institution_ids":["https://openalex.org/I4210159865","https://openalex.org/I139660479"]},{"raw_affiliation_string":"The First Clinical Medical College, Bengbu Medical University, Bengbu, China","institution_ids":["https://openalex.org/I169351748"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100399346","display_name":"Han Zhang","orcid":"https://orcid.org/0000-0002-9338-0051"},"institutions":[{"id":"https://openalex.org/I169351748","display_name":"Bengbu Medical College","ror":"https://ror.org/01f8qvj05","country_code":"CN","type":"education","lineage":["https://openalex.org/I169351748"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Han Zhang","raw_affiliation_strings":["The First Clinical Medical College, Bengbu Medical University, Bengbu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The First Clinical Medical College, Bengbu Medical University, Bengbu, China","institution_ids":["https://openalex.org/I169351748"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008235853","display_name":"Yiwei Rao","orcid":null},"institutions":[{"id":"https://openalex.org/I169351748","display_name":"Bengbu Medical College","ror":"https://ror.org/01f8qvj05","country_code":"CN","type":"education","lineage":["https://openalex.org/I169351748"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yiwei Rao","raw_affiliation_strings":["The First Clinical Medical College, Bengbu Medical University, Bengbu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The First Clinical Medical College, Bengbu Medical University, Bengbu, China","institution_ids":["https://openalex.org/I169351748"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042102382","display_name":"Xinyu Jiang","orcid":"https://orcid.org/0000-0002-3680-476X"},"institutions":[{"id":"https://openalex.org/I169351748","display_name":"Bengbu Medical College","ror":"https://ror.org/01f8qvj05","country_code":"CN","type":"education","lineage":["https://openalex.org/I169351748"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xinyu Jiang","raw_affiliation_strings":["The First Clinical Medical College, Bengbu Medical University, Bengbu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The First Clinical Medical College, Bengbu Medical University, Bengbu, China","institution_ids":["https://openalex.org/I169351748"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061798572","display_name":"Boheng Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Boheng Liu","raw_affiliation_strings":["The Second Clinical Medical College, Wenzhou Medical University, Wenzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Second Clinical Medical College, Wenzhou Medical University, Wenzhou, China","institution_ids":["https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100582191","display_name":"Zhikang Sun","orcid":null},"institutions":[{"id":"https://openalex.org/I27781120","display_name":"Wenzhou Medical University","ror":"https://ror.org/00rd5t069","country_code":"CN","type":"education","lineage":["https://openalex.org/I27781120"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhikang Sun","raw_affiliation_strings":["The Second Clinical Medical College, Wenzhou Medical University, Wenzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Second Clinical Medical College, Wenzhou Medical University, Wenzhou, China","institution_ids":["https://openalex.org/I27781120"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102001022","display_name":"Zhenyu Song","orcid":"https://orcid.org/0000-0001-7651-9771"},"institutions":[{"id":"https://openalex.org/I169351748","display_name":"Bengbu Medical College","ror":"https://ror.org/01f8qvj05","country_code":"CN","type":"education","lineage":["https://openalex.org/I169351748"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenyu Song","raw_affiliation_strings":["The First Clinical Medical College, Bengbu Medical University, Bengbu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The First Clinical Medical College, Bengbu Medical University, Bengbu, China","institution_ids":["https://openalex.org/I169351748"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030405098","display_name":"Yuan Gao","orcid":"https://orcid.org/0000-0001-9714-4219"},"institutions":[{"id":"https://openalex.org/I169351748","display_name":"Bengbu Medical College","ror":"https://ror.org/01f8qvj05","country_code":"CN","type":"education","lineage":["https://openalex.org/I169351748"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuan Gao","raw_affiliation_strings":["The First Clinical Medical College, Bengbu Medical University, Bengbu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The First Clinical Medical College, Bengbu Medical University, Bengbu, China","institution_ids":["https://openalex.org/I169351748"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026404286","display_name":"Yuhao Cui","orcid":"https://orcid.org/0009-0007-3644-7321"},"institutions":[{"id":"https://openalex.org/I169351748","display_name":"Bengbu Medical College","ror":"https://ror.org/01f8qvj05","country_code":"CN","type":"education","lineage":["https://openalex.org/I169351748"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuhao Cui","raw_affiliation_strings":["The First Clinical Medical College, Bengbu Medical University, Bengbu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The First Clinical Medical College, Bengbu Medical University, Bengbu, China","institution_ids":["https://openalex.org/I169351748"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100446448","display_name":"Xinyu Liu","orcid":"https://orcid.org/0000-0003-1395-9483"},"institutions":[{"id":"https://openalex.org/I169351748","display_name":"Bengbu Medical College","ror":"https://ror.org/01f8qvj05","country_code":"CN","type":"education","lineage":["https://openalex.org/I169351748"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xinyu Liu","raw_affiliation_strings":["The First Clinical Medical College, Bengbu Medical University, Bengbu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The First Clinical Medical College, Bengbu Medical University, Bengbu, China","institution_ids":["https://openalex.org/I169351748"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056699810","display_name":"Zedong Li","orcid":"https://orcid.org/0000-0003-0235-8957"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]},{"id":"https://openalex.org/I4210126592","display_name":"National Clinical Research","ror":"https://ror.org/03ddkvp86","country_code":"US","type":"facility","lineage":["https://openalex.org/I4210126592"]},{"id":"https://openalex.org/I4210159865","display_name":"Xiangya Hospital Central South University","ror":"https://ror.org/05c1yfj14","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210159865"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Zedong Li","raw_affiliation_strings":["Department of General Surgery, Xiangya Hospital, Central South University, Changsha, China. lizd12366@csu.edu.cn","National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University, Changsha, China. lizd12366@csu.edu.cn","National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University, Changsha, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of General Surgery, Xiangya Hospital, Central South University, Changsha, China. lizd12366@csu.edu.cn","institution_ids":["https://openalex.org/I4210159865","https://openalex.org/I139660479"]},{"raw_affiliation_string":"National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University, Changsha, China. lizd12366@csu.edu.cn","institution_ids":["https://openalex.org/I4210126592","https://openalex.org/I4210159865","https://openalex.org/I139660479"]},{"raw_affiliation_string":"National Clinical Research Center for Geriatric Disorders, Xiangya Hospital, Central South University, Changsha, China","institution_ids":["https://openalex.org/I4210159865","https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5056699810"],"corresponding_institution_ids":["https://openalex.org/I139660479","https://openalex.org/I4210126592","https://openalex.org/I4210159865"],"apc_list":{"value":3060,"currency":"USD","value_usd":3060},"apc_paid":{"value":3060,"currency":"USD","value_usd":3060},"fwci":6.5334,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.97368805,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"9","issue":"1","first_page":"25","last_page":"25"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.7526000142097473,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.7526000142097473,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.06499999761581421,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.041600000113248825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.7465000152587891},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7394999861717224},{"id":"https://openalex.org/keywords/standardization","display_name":"Standardization","score":0.6977999806404114},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.5196999907493591},{"id":"https://openalex.org/keywords/computational-model","display_name":"Computational model","score":0.5034000277519226},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.42739999294281006},{"id":"https://openalex.org/keywords/troubleshooting","display_name":"Troubleshooting","score":0.4120999872684479},{"id":"https://openalex.org/keywords/emulation","display_name":"Emulation","score":0.37299999594688416},{"id":"https://openalex.org/keywords/translational-medicine","display_name":"Translational medicine","score":0.36410000920295715},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.35519999265670776}],"concepts":[{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.7465000152587891},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7394999861717224},{"id":"https://openalex.org/C188087704","wikidata":"https://www.wikidata.org/wiki/Q369577","display_name":"Standardization","level":2,"score":0.6977999806404114},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6640999913215637},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.5196999907493591},{"id":"https://openalex.org/C66024118","wikidata":"https://www.wikidata.org/wiki/Q1122506","display_name":"Computational model","level":2,"score":0.5034000277519226},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.42829999327659607},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.42739999294281006},{"id":"https://openalex.org/C147494362","wikidata":"https://www.wikidata.org/wiki/Q2078905","display_name":"Troubleshooting","level":2,"score":0.4120999872684479},{"id":"https://openalex.org/C149810388","wikidata":"https://www.wikidata.org/wiki/Q5374873","display_name":"Emulation","level":2,"score":0.37299999594688416},{"id":"https://openalex.org/C162264550","wikidata":"https://www.wikidata.org/wiki/Q17112037","display_name":"Translational medicine","level":2,"score":0.36410000920295715},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.36090001463890076},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.35519999265670776},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.35519999265670776},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3427000045776367},{"id":"https://openalex.org/C3019813237","wikidata":"https://www.wikidata.org/wiki/Q65089264","display_name":"Model validation","level":2,"score":0.3411000072956085},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.33410000801086426},{"id":"https://openalex.org/C2779446555","wikidata":"https://www.wikidata.org/wiki/Q7663877","display_name":"Systems pharmacology","level":3,"score":0.33169999718666077},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.3314000070095062},{"id":"https://openalex.org/C2778533338","wikidata":"https://www.wikidata.org/wiki/Q7935148","display_name":"Virtual patient","level":2,"score":0.3287999927997589},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.3262999951839447},{"id":"https://openalex.org/C128544194","wikidata":"https://www.wikidata.org/wiki/Q474859","display_name":"Translational research","level":2,"score":0.32409998774528503},{"id":"https://openalex.org/C2777609615","wikidata":"https://www.wikidata.org/wiki/Q2527919","display_name":"Virtual Laboratory","level":2,"score":0.3142000138759613},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.3109000027179718},{"id":"https://openalex.org/C64903051","wikidata":"https://www.wikidata.org/wiki/Q2198549","display_name":"Drug development","level":3,"score":0.3025999963283539},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.30160000920295715},{"id":"https://openalex.org/C137866125","wikidata":"https://www.wikidata.org/wiki/Q4299308","display_name":"Modelling biological systems","level":3,"score":0.2888000011444092},{"id":"https://openalex.org/C149364088","wikidata":"https://www.wikidata.org/wiki/Q185917","display_name":"Translation (biology)","level":4,"score":0.28459998965263367},{"id":"https://openalex.org/C36415437","wikidata":"https://www.wikidata.org/wiki/Q7663871","display_name":"Systems medicine","level":3,"score":0.28189998865127563},{"id":"https://openalex.org/C57634137","wikidata":"https://www.wikidata.org/wiki/Q474859","display_name":"Translational science","level":2,"score":0.2784999907016754},{"id":"https://openalex.org/C153701036","wikidata":"https://www.wikidata.org/wiki/Q659974","display_name":"Trustworthiness","level":2,"score":0.27720001339912415},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.2736000120639801},{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.271699994802475},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.2696000039577484},{"id":"https://openalex.org/C145741570","wikidata":"https://www.wikidata.org/wiki/Q7251534","display_name":"Proteogenomics","level":5,"score":0.2678999900817871},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.2635999917984009},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.25699999928474426},{"id":"https://openalex.org/C2988867146","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Human disease","level":3,"score":0.2556000053882599},{"id":"https://openalex.org/C2994543053","wikidata":"https://www.wikidata.org/wiki/Q7239206","display_name":"Preclinical testing","level":2,"score":0.25369998812675476},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.2517000138759613}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1038/s41746-025-02198-6","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41746-025-02198-6","pdf_url":"https://www.nature.com/articles/s41746-025-02198-6_reference.pdf","source":{"id":"https://openalex.org/S4210195431","display_name":"npj Digital Medicine","issn_l":"2398-6352","issn":["2398-6352"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"npj Digital Medicine","raw_type":"journal-article"},{"id":"pmid:41381900","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41381900","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"NPJ digital medicine","raw_type":null},{"id":"pmh:oai:doaj.org/article:7b70dae54baa4673acb854e2f50470e5","is_oa":true,"landing_page_url":"https://doaj.org/article/7b70dae54baa4673acb854e2f50470e5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"npj Digital Medicine, Vol 9, Iss 1, Pp 1-21 (2025)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:12789685","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12789685/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"NPJ Digit Med","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1038/s41746-025-02198-6","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41746-025-02198-6","pdf_url":"https://www.nature.com/articles/s41746-025-02198-6_reference.pdf","source":{"id":"https://openalex.org/S4210195431","display_name":"npj Digital Medicine","issn_l":"2398-6352","issn":["2398-6352"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"npj Digital Medicine","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1025528069","display_name":null,"funder_award_id":"No.82503242","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4189165599","display_name":null,"funder_award_id":"2025M772105","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G542336015","display_name":null,"funder_award_id":"2025JJ60596","funder_id":"https://openalex.org/F4320322843","funder_display_name":"Natural Science Foundation of\u00a0Hunan Province"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321543","display_name":"China Postdoctoral Science Foundation","ror":"https://ror.org/0426zh255"},{"id":"https://openalex.org/F4320322843","display_name":"Natural Science Foundation of\u00a0Hunan Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4417240226.pdf","grobid_xml":"https://content.openalex.org/works/W4417240226.grobid-xml"},"referenced_works_count":296,"referenced_works":["https://openalex.org/W115452890","https://openalex.org/W151650441","https://openalex.org/W1492371164","https://openalex.org/W1600033337","https://openalex.org/W1860763155","https://openalex.org/W1892970628","https://openalex.org/W1932996495","https://openalex.org/W1963462023","https://openalex.org/W1964976889","https://openalex.org/W1974974415","https://openalex.org/W1986553481","https://openalex.org/W1986849266","https://openalex.org/W1991303552","https://openalex.org/W1991339919","https://openalex.org/W2008123441","https://openalex.org/W2020541351","https://openalex.org/W2040890820","https://openalex.org/W2041715593","https://openalex.org/W2043688388","https://openalex.org/W2067253662","https://openalex.org/W2073903631","https://openalex.org/W2075407107","https://openalex.org/W2082344785","https://openalex.org/W2089807370","https://openalex.org/W2096192437","https://openalex.org/W2097240335","https://openalex.org/W2100345558","https://openalex.org/W2102653059","https://openalex.org/W2107665951","https://openalex.org/W2118258530","https://openalex.org/W2120679339","https://openalex.org/W2121642757","https://openalex.org/W2129167322","https://openalex.org/W2129374659","https://openalex.org/W2130159944","https://openalex.org/W2130281033","https://openalex.org/W2133941924","https://openalex.org/W2153892698","https://openalex.org/W2158485828","https://openalex.org/W2163252162","https://openalex.org/W2163493106","https://openalex.org/W2170405129","https://openalex.org/W2272546316","https://openalex.org/W2334998576","https://openalex.org/W2339342978","https://openalex.org/W2341128841","https://openalex.org/W2343996610","https://openalex.org/W2399630957","https://openalex.org/W2462122509","https://openalex.org/W2463286719","https://openalex.org/W2490330487","https://openalex.org/W2498989218","https://openalex.org/W2534390410","https://openalex.org/W2572658828","https://openalex.org/W2593960650","https://openalex.org/W2608995788","https://openalex.org/W2627830512","https://openalex.org/W2750049634","https://openalex.org/W2754183998","https://openalex.org/W2757254843","https://openalex.org/W2783992664","https://openalex.org/W2801507224","https://openalex.org/W2804822570","https://openalex.org/W2883696638","https://openalex.org/W2887693514","https://openalex.org/W2888958687","https://openalex.org/W2903323139","https://openalex.org/W2905993983","https://openalex.org/W2913467662","https://openalex.org/W2922466883","https://openalex.org/W2923300855","https://openalex.org/W2939321522","https://openalex.org/W2944684129","https://openalex.org/W2947877009","https://openalex.org/W2949797623","https://openalex.org/W2951031981","https://openalex.org/W2965552103","https://openalex.org/W2966871345","https://openalex.org/W2966884791","https://openalex.org/W2970568415","https://openalex.org/W2972445800","https://openalex.org/W2980113327","https://openalex.org/W2984472267","https://openalex.org/W2992147743","https://openalex.org/W2993894543","https://openalex.org/W2996014629","https://openalex.org/W2996171578","https://openalex.org/W3022149485","https://openalex.org/W3022285953","https://openalex.org/W3025760344","https://openalex.org/W3028914388","https://openalex.org/W3029447859","https://openalex.org/W3033403590","https://openalex.org/W3036483815","https://openalex.org/W3037882675","https://openalex.org/W3038530818","https://openalex.org/W3040489328","https://openalex.org/W3042567488","https://openalex.org/W3047783866","https://openalex.org/W3048575781","https://openalex.org/W3048831072","https://openalex.org/W3080133182","https://openalex.org/W3081380767","https://openalex.org/W3086667591","https://openalex.org/W3088127583","https://openalex.org/W3094156280","https://openalex.org/W3095316811","https://openalex.org/W3101019807","https://openalex.org/W3111015203","https://openalex.org/W3111521801","https://openalex.org/W3116256493","https://openalex.org/W3120164940","https://openalex.org/W3129866267","https://openalex.org/W3136552952","https://openalex.org/W3138479716","https://openalex.org/W3153418506","https://openalex.org/W3158145137","https://openalex.org/W3172828480","https://openalex.org/W3177981640","https://openalex.org/W3182318349","https://openalex.org/W3183198896","https://openalex.org/W3190428147","https://openalex.org/W3193433935","https://openalex.org/W3195487229","https://openalex.org/W3195676966","https://openalex.org/W3200047701","https://openalex.org/W3200853299","https://openalex.org/W3208207025","https://openalex.org/W3209647124","https://openalex.org/W3210306829","https://openalex.org/W3211871396","https://openalex.org/W3212148341","https://openalex.org/W3212427395","https://openalex.org/W4200044134","https://openalex.org/W4200168321","https://openalex.org/W4200226212","https://openalex.org/W4205228557","https://openalex.org/W4211081407","https://openalex.org/W4213423749","https://openalex.org/W4220652963","https://openalex.org/W4220709734","https://openalex.org/W4220896736","https://openalex.org/W4225128010","https://openalex.org/W4225278475","https://openalex.org/W4226428451","https://openalex.org/W4236448317","https://openalex.org/W4254419540","https://openalex.org/W4281988834","https://openalex.org/W4285077133","https://openalex.org/W4287750851","https://openalex.org/W4288808701","https://openalex.org/W4289593681","https://openalex.org/W4291014617","https://openalex.org/W4292117688","https://openalex.org/W4294804859","https://openalex.org/W4296551289","https://openalex.org/W4297973552","https://openalex.org/W4306412305","https://openalex.org/W4307952312","https://openalex.org/W4309862248","https://openalex.org/W4311060730","https://openalex.org/W4313324949","https://openalex.org/W4313346475","https://openalex.org/W4313889830","https://openalex.org/W4316013426","https://openalex.org/W4319826836","https://openalex.org/W4322576464","https://openalex.org/W4323830612","https://openalex.org/W4327905121","https://openalex.org/W4330334925","https://openalex.org/W4361228693","https://openalex.org/W4364355678","https://openalex.org/W4366000526","https://openalex.org/W4375946946","https://openalex.org/W4376109912","https://openalex.org/W4377157662","https://openalex.org/W4377290383","https://openalex.org/W4378838672","https://openalex.org/W4381325555","https://openalex.org/W4381716616","https://openalex.org/W4382632237","https://openalex.org/W4383223729","https://openalex.org/W4383482845","https://openalex.org/W4384820729","https://openalex.org/W4385342479","https://openalex.org/W4385383119","https://openalex.org/W4385564466","https://openalex.org/W4385665362","https://openalex.org/W4385760593","https://openalex.org/W4385877467","https://openalex.org/W4385955324","https://openalex.org/W4386370168","https://openalex.org/W4386590258","https://openalex.org/W4386602502","https://openalex.org/W4387026748","https://openalex.org/W4387119940","https://openalex.org/W4387130479","https://openalex.org/W4387297107","https://openalex.org/W4387495040","https://openalex.org/W4387966880","https://openalex.org/W4387971130","https://openalex.org/W4389135772","https://openalex.org/W4389164788","https://openalex.org/W4389502519","https://openalex.org/W4389951589","https://openalex.org/W4389982108","https://openalex.org/W4390032641","https://openalex.org/W4390225373","https://openalex.org/W4390485108","https://openalex.org/W4390507795","https://openalex.org/W4391424767","https://openalex.org/W4391574229","https://openalex.org/W4391934137","https://openalex.org/W4392112330","https://openalex.org/W4392232009","https://openalex.org/W4392247018","https://openalex.org/W4392303055","https://openalex.org/W4392383454","https://openalex.org/W4392575396","https://openalex.org/W4392782765","https://openalex.org/W4393183052","https://openalex.org/W4393715516","https://openalex.org/W4393870852","https://openalex.org/W4394608847","https://openalex.org/W4394816705","https://openalex.org/W4395050145","https://openalex.org/W4395069691","https://openalex.org/W4396514423","https://openalex.org/W4398133351","https://openalex.org/W4399131367","https://openalex.org/W4399319506","https://openalex.org/W4399353630","https://openalex.org/W4399387478","https://openalex.org/W4399546339","https://openalex.org/W4399817419","https://openalex.org/W4399834978","https://openalex.org/W4400019022","https://openalex.org/W4400140819","https://openalex.org/W4400969508","https://openalex.org/W4401093660","https://openalex.org/W4401353599","https://openalex.org/W4401636842","https://openalex.org/W4401794004","https://openalex.org/W4401966584","https://openalex.org/W4402401756","https://openalex.org/W4402747741","https://openalex.org/W4402964250","https://openalex.org/W4403107901","https://openalex.org/W4403118695","https://openalex.org/W4403394580","https://openalex.org/W4403402994","https://openalex.org/W4403405969","https://openalex.org/W4404328068","https://openalex.org/W4404479985","https://openalex.org/W4404599162","https://openalex.org/W4405095896","https://openalex.org/W4405157127","https://openalex.org/W4405166050","https://openalex.org/W4405841659","https://openalex.org/W4405935277","https://openalex.org/W4406170851","https://openalex.org/W4406402218","https://openalex.org/W4406715779","https://openalex.org/W4406790549","https://openalex.org/W4407151613","https://openalex.org/W4407177178","https://openalex.org/W4407567213","https://openalex.org/W4407690874","https://openalex.org/W4408091680","https://openalex.org/W4408285079","https://openalex.org/W4408537402","https://openalex.org/W4408785030","https://openalex.org/W4409361239","https://openalex.org/W4409411739","https://openalex.org/W4409486606","https://openalex.org/W4409535051","https://openalex.org/W4409606942","https://openalex.org/W4409938619","https://openalex.org/W4409985141","https://openalex.org/W4410431675","https://openalex.org/W4410503958","https://openalex.org/W4410701357","https://openalex.org/W4410868530","https://openalex.org/W4411203798","https://openalex.org/W4411497393","https://openalex.org/W4411690475","https://openalex.org/W4411757935","https://openalex.org/W4411900437","https://openalex.org/W4412001908","https://openalex.org/W4412075404","https://openalex.org/W4412086498","https://openalex.org/W4412454117","https://openalex.org/W4412929241","https://openalex.org/W4412931024","https://openalex.org/W4413055170","https://openalex.org/W4414154100"],"related_works":[],"abstract_inverted_index":{"AI-driven":[0],"virtual":[1,72,93,149],"cell":[2],"models":[3,32,50],"show":[4],"the":[5,9,65,146],"potential":[6,106],"to":[7,37,81,107,144],"transform":[8],"paradigm":[10],"of":[11,41,54,71,92,148],"life":[12],"sciences":[13],"research":[14],"by":[15],"integrating":[16],"multimodal":[17],"omics":[18],"data":[19,119],"(e.g.,":[20],"single-cell":[21],"transcriptomics":[22],"and":[23,33,46,59,68,87,99,111,121,127,134,141,154],"proteomics)":[24],"with":[25],"advanced":[26],"algorithms":[27],"such":[28],"as":[29],"deep":[30],"generative":[31],"graph":[34],"neural":[35],"networks":[36],"enable":[38,51],"high-precision":[39,52],"predictions":[40,53],"drug":[42,55,97,155],"responses,":[43,56],"gene":[44,57],"perturbations,":[45,58],"disease":[47,60,100],"progression.":[48,61],"These":[49],"This":[62],"review":[63],"outlines":[64],"technical":[66],"pathways":[67],"validation":[69],"mechanisms":[70],"cells,":[73],"emphasizing":[74],"a":[75],"closed-loop":[76],"workflow":[77],"from":[78],"computational":[79],"evaluation":[80],"experimental":[82],"verification":[83],"using":[84],"CRISPR":[85],"assays":[86],"organoid":[88],"platforms.":[89],"The":[90],"applications":[91],"cells":[94,150],"in":[95,116,151],"personalized":[96],"screening":[98],"modeling":[101],"are":[102,130],"highlighted,":[103],"showcasing":[104],"their":[105],"reduce":[108],"animal":[109],"testing":[110],"optimize":[112],"therapy.":[113],"However,":[114],"challenges":[115],"regulatory":[117],"acceptance,":[118],"privacy,":[120],"model":[122],"interpretability":[123],"remain.":[124],"Global":[125],"policy":[126],"standardization":[128,143],"trends":[129],"driving":[131],"clinical":[132],"translation,":[133],"future":[135],"advancements":[136],"will":[137],"involve":[138],"cross-disciplinary":[139],"integration":[140],"greater":[142],"enhance":[145],"impact":[147],"precision":[152],"medicine":[153],"discovery.":[156]},"counts_by_year":[{"year":2026,"cited_by_count":13}],"updated_date":"2026-07-05T07:55:05.734416","created_date":"2025-12-11T00:00:00"}
