{"id":"https://openalex.org/W4385064016","doi":"https://doi.org/10.1038/s41746-023-00878-9","title":"The IMPACT framework and implementation for accessible in silico clinical phenotyping in the digital era","display_name":"The IMPACT framework and implementation for accessible in silico clinical phenotyping in the digital era","publication_year":2023,"publication_date":"2023-07-21","ids":{"openalex":"https://openalex.org/W4385064016","doi":"https://doi.org/10.1038/s41746-023-00878-9","pmid":"https://pubmed.ncbi.nlm.nih.gov/37479735"},"language":"en","primary_location":{"id":"doi:10.1038/s41746-023-00878-9","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41746-023-00878-9","pdf_url":"https://www.nature.com/articles/s41746-023-00878-9.pdf","source":{"id":"https://openalex.org/S4210195431","display_name":"npj Digital Medicine","issn_l":"2398-6352","issn":["2398-6352"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"npj Digital Medicine","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.nature.com/articles/s41746-023-00878-9.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5003128469","display_name":"Andrew Wen","orcid":"https://orcid.org/0000-0001-9090-8028"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]},{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Wen","raw_affiliation_strings":["Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, 77030, USA","School of Biomedical Informatics, University of Texas Health Science Center, Houston, USA","Department of AI & Informatics, Mayo Clinic, Rochester, USA"],"raw_orcid":"https://orcid.org/0000-0001-9090-8028","affiliations":[{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I919571938"]},{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center, Houston, USA","institution_ids":["https://openalex.org/I919571938"]},{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013043483","display_name":"Huan He","orcid":"https://orcid.org/0000-0003-1312-4195"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Huan He","raw_affiliation_strings":["Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","Department of AI & Informatics, Mayo Clinic, Rochester, USA"],"raw_orcid":"https://orcid.org/0000-0003-1312-4195","affiliations":[{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032226587","display_name":"Sunyang Fu","orcid":"https://orcid.org/0000-0003-1691-5179"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]},{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sunyang Fu","raw_affiliation_strings":["Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, 77030, USA","Department of AI & Informatics, Mayo Clinic, Rochester, USA","School of Biomedical Informatics, University of Texas Health Science Center, Houston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I919571938"]},{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, USA","institution_ids":["https://openalex.org/I1330342723"]},{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center, Houston, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100321835","display_name":"Sijia Liu","orcid":"https://orcid.org/0000-0001-9763-1164"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sijia Liu","raw_affiliation_strings":["Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","Department of AI & Informatics, Mayo Clinic, Rochester, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007441056","display_name":"Kurt Miller","orcid":null},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kurt Miller","raw_affiliation_strings":["Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","Department of AI & Informatics, Mayo Clinic, Rochester, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100406711","display_name":"Liwei Wang","orcid":"https://orcid.org/0000-0001-9970-8604"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]},{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Liwei Wang","raw_affiliation_strings":["Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, 77030, USA","Department of AI & Informatics, Mayo Clinic, Rochester, USA","School of Biomedical Informatics, University of Texas Health Science Center, Houston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I919571938"]},{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, USA","institution_ids":["https://openalex.org/I1330342723"]},{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center, Houston, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046709245","display_name":"Kirk Roberts","orcid":"https://orcid.org/0000-0001-6525-5213"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kirk E. Roberts","raw_affiliation_strings":["School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, 77030, USA","School of Biomedical Informatics, University of Texas Health Science Center, Houston, USA"],"raw_orcid":"https://orcid.org/0000-0001-6525-5213","affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, 77030, USA","institution_ids":["https://openalex.org/I919571938"]},{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center, Houston, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044068445","display_name":"Steven Bedrick","orcid":"https://orcid.org/0000-0002-0163-9397"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steven D. Bedrick","raw_affiliation_strings":["Department of Medical Informatics and Clinical Epidemiology, Oregon Health & Science University, Portland, OR, 97239, USA","Department of Medical Informatics and Clinical Epidemiology, Oregon Health & Science University, Portland, USA"],"raw_orcid":"https://orcid.org/0000-0002-0163-9397","affiliations":[{"raw_affiliation_string":"Department of Medical Informatics and Clinical Epidemiology, Oregon Health & Science University, Portland, OR, 97239, USA","institution_ids":["https://openalex.org/I165690674"]},{"raw_affiliation_string":"Department of Medical Informatics and Clinical Epidemiology, Oregon Health & Science University, Portland, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001422310","display_name":"William Hersh","orcid":"https://orcid.org/0000-0002-4114-5148"},"institutions":[{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William R. Hersh","raw_affiliation_strings":["Department of Medical Informatics and Clinical Epidemiology, Oregon Health & Science University, Portland, OR, 97239, USA","Department of Medical Informatics and Clinical Epidemiology, Oregon Health & Science University, Portland, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics and Clinical Epidemiology, Oregon Health & Science University, Portland, OR, 97239, USA","institution_ids":["https://openalex.org/I165690674"]},{"raw_affiliation_string":"Department of Medical Informatics and Clinical Epidemiology, Oregon Health & Science University, Portland, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101585391","display_name":"Hongfang Liu","orcid":"https://orcid.org/0000-0003-2570-3741"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]},{"id":"https://openalex.org/I4210159031","display_name":"The University of Texas Health Science Center","ror":"https://ror.org/05cwbxa29","country_code":"US","type":"education","lineage":["https://openalex.org/I4210159031"]},{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Hongfang Liu","raw_affiliation_strings":["Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA. Hongfang.Liu@uth.tmc.edu","School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, 77030, USA. Hongfang.Liu@uth.tmc.edu","Department of AI & Informatics, Mayo Clinic, Rochester, USA","School of Biomedical Informatics, University of Texas Health Science Center, Houston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, MN, 55905, USA. Hongfang.Liu@uth.tmc.edu","institution_ids":["https://openalex.org/I4210146710","https://openalex.org/I4210125099"]},{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center, Houston, TX, 77030, USA. Hongfang.Liu@uth.tmc.edu","institution_ids":["https://openalex.org/I4210159031","https://openalex.org/I919571938"]},{"raw_affiliation_string":"Department of AI & Informatics, Mayo Clinic, Rochester, USA","institution_ids":["https://openalex.org/I1330342723"]},{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center, Houston, USA","institution_ids":["https://openalex.org/I919571938"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5101585391"],"corresponding_institution_ids":["https://openalex.org/I1330342723","https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I4210159031","https://openalex.org/I919571938"],"apc_list":{"value":3060,"currency":"USD","value_usd":3060},"apc_paid":{"value":3060,"currency":"USD","value_usd":3060},"fwci":0.4498,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.66809155,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"6","issue":"1","first_page":"132","last_page":"132"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9732999801635742,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10582","display_name":"Ethics in Clinical Research","score":0.9699000120162964,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.8469071388244629},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.7406584024429321},{"id":"https://openalex.org/keywords/bottleneck","display_name":"Bottleneck","score":0.7346660494804382},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.69813472032547},{"id":"https://openalex.org/keywords/reusability","display_name":"Reusability","score":0.6037004590034485},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5934056639671326},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.45838847756385803},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.3949037790298462},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.39085838198661804},{"id":"https://openalex.org/keywords/risk-analysis","display_name":"Risk analysis (engineering)","score":0.33394068479537964},{"id":"https://openalex.org/keywords/systems-engineering","display_name":"Systems engineering","score":0.16400480270385742},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1395569145679474},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10783225297927856},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09484130144119263},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.08934623003005981},{"id":"https://openalex.org/keywords/embedded-system","display_name":"Embedded system","score":0.08825600147247314}],"concepts":[{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.8469071388244629},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.7406584024429321},{"id":"https://openalex.org/C2780513914","wikidata":"https://www.wikidata.org/wiki/Q18210350","display_name":"Bottleneck","level":2,"score":0.7346660494804382},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.69813472032547},{"id":"https://openalex.org/C137981799","wikidata":"https://www.wikidata.org/wiki/Q1369184","display_name":"Reusability","level":3,"score":0.6037004590034485},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5934056639671326},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.45838847756385803},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.3949037790298462},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.39085838198661804},{"id":"https://openalex.org/C112930515","wikidata":"https://www.wikidata.org/wiki/Q4389547","display_name":"Risk analysis (engineering)","level":1,"score":0.33394068479537964},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.16400480270385742},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1395569145679474},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10783225297927856},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09484130144119263},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.08934623003005981},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.08825600147247314},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1038/s41746-023-00878-9","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41746-023-00878-9","pdf_url":"https://www.nature.com/articles/s41746-023-00878-9.pdf","source":{"id":"https://openalex.org/S4210195431","display_name":"npj Digital Medicine","issn_l":"2398-6352","issn":["2398-6352"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"npj Digital Medicine","raw_type":"journal-article"},{"id":"pmid:37479735","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37479735","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"NPJ digital medicine","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10362064","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10362064","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10362064/pdf/41746_2023_Article_878.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"NPJ Digit Med","raw_type":"Text"},{"id":"pmh:oai:digitalcommons.library.tmc.edu:uthshis_docs-1164","is_oa":false,"landing_page_url":"https://digitalcommons.library.tmc.edu/uthshis_docs/164","pdf_url":null,"source":{"id":"https://openalex.org/S4377196655","display_name":"Digital Commons-TMC (Texas Medical Center)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1337852284","host_organization_name":"Texas Medical Center","host_organization_lineage":["https://openalex.org/I1337852284"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal Articles","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:330493cb0c304bbaafe06d8d67bec2ae","is_oa":true,"landing_page_url":"https://doaj.org/article/330493cb0c304bbaafe06d8d67bec2ae","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"npj Digital Medicine, Vol 6, Iss 1, Pp 1-8 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1038/s41746-023-00878-9","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41746-023-00878-9","pdf_url":"https://www.nature.com/articles/s41746-023-00878-9.pdf","source":{"id":"https://openalex.org/S4210195431","display_name":"npj Digital Medicine","issn_l":"2398-6352","issn":["2398-6352"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"npj Digital Medicine","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17","score":0.46000000834465027}],"awards":[{"id":"https://openalex.org/G1005989568","display_name":null,"funder_award_id":"U01TR002062","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G4804796168","display_name":null,"funder_award_id":"R01LM011934","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G6071359385","display_name":null,"funder_award_id":"U01TR002062","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6568267561","display_name":null,"funder_award_id":"R01LM011934","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320306143","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4385064016.pdf"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W15289527","https://openalex.org/W34678172","https://openalex.org/W86609720","https://openalex.org/W1446829270","https://openalex.org/W1502865770","https://openalex.org/W1561070017","https://openalex.org/W1982059951","https://openalex.org/W2005545412","https://openalex.org/W2019898305","https://openalex.org/W2063613784","https://openalex.org/W2066578320","https://openalex.org/W2077541161","https://openalex.org/W2096252540","https://openalex.org/W2123803128","https://openalex.org/W2130755479","https://openalex.org/W2131801584","https://openalex.org/W2133974927","https://openalex.org/W2138239858","https://openalex.org/W2140796896","https://openalex.org/W2146089916","https://openalex.org/W2151068025","https://openalex.org/W2151868700","https://openalex.org/W2159583324","https://openalex.org/W2165067209","https://openalex.org/W2516351633","https://openalex.org/W2604410201","https://openalex.org/W2768488789","https://openalex.org/W2770445088","https://openalex.org/W2791942584","https://openalex.org/W2808129629","https://openalex.org/W2873028792","https://openalex.org/W2902802452","https://openalex.org/W2911661483","https://openalex.org/W2912300176","https://openalex.org/W2980488626","https://openalex.org/W2981869278","https://openalex.org/W2995349381","https://openalex.org/W3013721505","https://openalex.org/W3043082460","https://openalex.org/W3045889620","https://openalex.org/W3048179169","https://openalex.org/W3091869825","https://openalex.org/W3095585365","https://openalex.org/W3103895001","https://openalex.org/W3152661589","https://openalex.org/W3153938616","https://openalex.org/W3161428478","https://openalex.org/W3170210531","https://openalex.org/W4223468055","https://openalex.org/W4240422607","https://openalex.org/W4252076394","https://openalex.org/W4286377178","https://openalex.org/W4307224186","https://openalex.org/W6630034250"],"related_works":["https://openalex.org/W2215606090","https://openalex.org/W2394142092","https://openalex.org/W2357461155","https://openalex.org/W2384129116","https://openalex.org/W2354251581","https://openalex.org/W2131591406","https://openalex.org/W2766721049","https://openalex.org/W3145924829","https://openalex.org/W2384224704","https://openalex.org/W3007824595"],"abstract_inverted_index":{"Clinical":[0],"phenotyping":[1,51,60,77,99,147],"is":[2,25],"often":[3,26],"a":[4,27,58,64,82,107,131,135],"foundational":[5],"requirement":[6],"for":[7,11,81],"obtaining":[8],"datasets":[9],"necessary":[10],"the":[12,92,95,104,145],"development":[13,30,52,149],"of":[14,66,85,97,106,109,117,127,139],"digital":[15],"health":[16],"applications.":[17],"Traditionally":[18],"done":[19],"via":[20,45],"manual":[21],"abstraction,":[22],"this":[23,43],"task":[24,44,61],"bottleneck":[28],"in":[29,41,63,103],"due":[31],"to":[32,54,94],"time":[33],"and":[34,100,143],"cost":[35],"requirements,":[36],"therefore":[37],"raising":[38],"significant":[39],"interest":[40],"accomplishing":[42],"in-silico":[46,50,72,76,98],"means.":[47],"Nevertheless,":[48],"current":[49],"tends":[53],"be":[55],"focused":[56],"on":[57,137],"single":[59],"resulting":[62],"dearth":[65],"reusable":[67],"tools":[68],"supporting":[69],"cross-task":[70,141],"generalizable":[71],"phenotyping.":[73],"In":[74,120],"addition,":[75,121],"remains":[78],"largely":[79],"inaccessible":[80],"substantial":[83],"portion":[84],"potentially":[86],"interested":[87],"users.":[88],"Here,":[89],"we":[90,122],"highlight":[91],"barriers":[93],"usage":[96],"potential":[101],"solutions":[102],"form":[105],"framework":[108,129],"several":[110],"desiderata":[111],"as":[112,130],"observed":[113],"during":[114],"our":[115],"implementation":[116,126],"such":[118],"tasks.":[119],"introduce":[123],"an":[124],"example":[125],"said":[128],"software":[132],"application,":[133],"with":[134],"focus":[136],"ease":[138],"adoption,":[140],"reusability,":[142],"facilitating":[144],"clinical":[146],"algorithm":[148],"process.":[150]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
