{"id":"https://openalex.org/W2945270037","doi":"https://doi.org/10.1038/s41746-019-0120-2","title":"Pragmatic considerations for fostering reproducible research in artificial intelligence","display_name":"Pragmatic considerations for fostering reproducible research in artificial intelligence","publication_year":2019,"publication_date":"2019-05-22","ids":{"openalex":"https://openalex.org/W2945270037","doi":"https://doi.org/10.1038/s41746-019-0120-2","mag":"2945270037","pmid":"https://pubmed.ncbi.nlm.nih.gov/31304388"},"language":"en","primary_location":{"id":"doi:10.1038/s41746-019-0120-2","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41746-019-0120-2","pdf_url":"https://www.nature.com/articles/s41746-019-0120-2.pdf","source":{"id":"https://openalex.org/S4210195431","display_name":"npj Digital Medicine","issn_l":"2398-6352","issn":["2398-6352"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"npj Digital Medicine","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://www.nature.com/articles/s41746-019-0120-2.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023936819","display_name":"Rickey E. Carter","orcid":"https://orcid.org/0000-0002-0818-273X"},"institutions":[{"id":"https://openalex.org/I2801572250","display_name":"Jacksonville College","ror":"https://ror.org/03a9t7g49","country_code":"US","type":"education","lineage":["https://openalex.org/I2801572250"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Rickey E. Carter","raw_affiliation_strings":["1Department of Health Sciences Research, Mayo Clinic, Jacksonville, FL USA","Department of Health Sciences Research, Mayo Clinic, Jacksonville, FL, USA"],"raw_orcid":"https://orcid.org/0000-0002-0818-273X","affiliations":[{"raw_affiliation_string":"1Department of Health Sciences Research, Mayo Clinic, Jacksonville, FL USA","institution_ids":["https://openalex.org/I4210146710","https://openalex.org/I2801572250"]},{"raw_affiliation_string":"Department of Health Sciences Research, Mayo Clinic, Jacksonville, FL, USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046460674","display_name":"Zachi I. Attia","orcid":"https://orcid.org/0000-0002-9706-7900"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zachi I. Attia","raw_affiliation_strings":["2Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN USA","Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210125099"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001963115","display_name":"Francisco L\u00f3pez-Jim\u00e9nez","orcid":"https://orcid.org/0000-0001-5788-9734"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Francisco Lopez-Jimenez","raw_affiliation_strings":["2Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN USA","Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210125099"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020289692","display_name":"Paul A. Friedman","orcid":"https://orcid.org/0000-0001-5052-2948"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Paul A. Friedman","raw_affiliation_strings":["2Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN USA","Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"2Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN USA","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Department of Cardiovascular Disease, Mayo Clinic, Rochester, MN, USA","institution_ids":["https://openalex.org/I4210125099"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5023936819"],"corresponding_institution_ids":["https://openalex.org/I2801572250","https://openalex.org/I4210146710"],"apc_list":{"value":3060,"currency":"USD","value_usd":3060},"apc_paid":{"value":3060,"currency":"USD","value_usd":3060},"fwci":2.1425,"has_fulltext":true,"cited_by_count":40,"citation_normalized_percentile":{"value":0.88968668,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"2","issue":"1","first_page":"42","last_page":"42"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11636","display_name":"Artificial Intelligence in Healthcare and Education","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11636","display_name":"Artificial Intelligence in Healthcare and Education","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10582","display_name":"Ethics in Clinical Research","score":0.9858999848365784,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.98580002784729,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/realm","display_name":"Realm","score":0.7616934776306152},{"id":"https://openalex.org/keywords/confidentiality","display_name":"Confidentiality","score":0.7400246858596802},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6369022130966187},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5847934484481812},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.4936893880367279},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4726901352405548},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.47057172656059265},{"id":"https://openalex.org/keywords/value","display_name":"Value (mathematics)","score":0.4204448163509369},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.16228562593460083},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.14085349440574646}],"concepts":[{"id":"https://openalex.org/C2778757428","wikidata":"https://www.wikidata.org/wiki/Q1250464","display_name":"Realm","level":2,"score":0.7616934776306152},{"id":"https://openalex.org/C71745522","wikidata":"https://www.wikidata.org/wiki/Q2476929","display_name":"Confidentiality","level":2,"score":0.7400246858596802},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6369022130966187},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5847934484481812},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.4936893880367279},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4726901352405548},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.47057172656059265},{"id":"https://openalex.org/C2776291640","wikidata":"https://www.wikidata.org/wiki/Q2912517","display_name":"Value (mathematics)","level":2,"score":0.4204448163509369},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.16228562593460083},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.14085349440574646},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1038/s41746-019-0120-2","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41746-019-0120-2","pdf_url":"https://www.nature.com/articles/s41746-019-0120-2.pdf","source":{"id":"https://openalex.org/S4210195431","display_name":"npj Digital Medicine","issn_l":"2398-6352","issn":["2398-6352"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"npj Digital Medicine","raw_type":"journal-article"},{"id":"pmid:31304388","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31304388","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"NPJ digital medicine","raw_type":null},{"id":"pmh:oai:doaj.org/article:7e151245c0a74163810096a1ef32bf70","is_oa":true,"landing_page_url":"https://doaj.org/article/7e151245c0a74163810096a1ef32bf70","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"npj Digital Medicine, Vol 2, Iss 1, Pp 1-3 (2019)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5586762","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6550149","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1038/s41746-019-0120-2","is_oa":true,"landing_page_url":"https://doi.org/10.1038/s41746-019-0120-2","pdf_url":"https://www.nature.com/articles/s41746-019-0120-2.pdf","source":{"id":"https://openalex.org/S4210195431","display_name":"npj Digital Medicine","issn_l":"2398-6352","issn":["2398-6352"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"npj Digital Medicine","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/5","display_name":"Gender equality","score":0.4099999964237213}],"awards":[{"id":"https://openalex.org/G1021289384","display_name":null,"funder_award_id":"UL1TR002377","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G6816082656","display_name":null,"funder_award_id":"UL1TR002377","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2945270037.pdf","grobid_xml":"https://content.openalex.org/works/W2945270037.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1590984175","https://openalex.org/W2008985174","https://openalex.org/W2169512394","https://openalex.org/W2557738935","https://openalex.org/W2617110182","https://openalex.org/W2774101154","https://openalex.org/W2786103837","https://openalex.org/W2789964206","https://openalex.org/W2790342510","https://openalex.org/W2803619185","https://openalex.org/W2807593075","https://openalex.org/W2810349670","https://openalex.org/W2811095531","https://openalex.org/W2883057049","https://openalex.org/W2888241607","https://openalex.org/W2901226889","https://openalex.org/W2906590431","https://openalex.org/W2912652107","https://openalex.org/W2936749120"],"related_works":["https://openalex.org/W4387497383","https://openalex.org/W3183948672","https://openalex.org/W3173606202","https://openalex.org/W3110381201","https://openalex.org/W2948807893","https://openalex.org/W2935909890","https://openalex.org/W2778153218","https://openalex.org/W2758277628","https://openalex.org/W1531601525","https://openalex.org/W2359053655"],"abstract_inverted_index":{"Artificial":[0],"intelligence":[1],"and":[2,23,50,71,75,106],"deep":[3],"learning":[4],"methods":[5],"hold":[6],"great":[7],"promise":[8],"in":[9,13,43,68],"the":[10,54],"medical":[11,80],"sciences":[12],"areas":[14],"such":[15],"as":[16],"enhanced":[17],"tumor":[18],"identification":[19],"from":[20,31],"radiographic":[21],"images,":[22],"natural":[24],"language":[25],"processing":[26],"to":[27,64,98],"extract":[28],"complex":[29],"information":[30],"electronic":[32],"health":[33],"records.":[34],"Scientific":[35,82],"review":[36,101],"of":[37,56,78,88,90],"AI":[38],"algorithms":[39],"has":[40],"involved":[41],"reproducibility,":[42],"which":[44],"investigators":[45],"share":[46],"protocols,":[47],"raw":[48],"data,":[49],"programming":[51],"codes.":[52],"Within":[53],"realm":[55],"medicine,":[57],"reproducibility":[58],"introduces":[59],"important":[60],"challenges,":[61],"including":[62],"risk":[63],"patient":[65,104],"privacy,":[66],"challenges":[67],"reproducing":[69],"results,":[70],"questions":[72],"regarding":[73],"ownership":[74],"financial":[76],"value":[77],"large":[79],"datasets.":[81],"review,":[83],"however,":[84],"mandates":[85],"some":[86],"form":[87],"resolution":[89],"these":[91],"inherent":[92],"conflicts.":[93],"We":[94],"propose":[95],"several":[96],"approaches":[97],"permit":[99],"scientific":[100],"while":[102],"maintaining":[103],"privacy":[105],"data":[107],"confidentiality.":[108]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":16},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":6}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
