{"id":"https://openalex.org/W2623168030","doi":"https://doi.org/10.1038/nature22971","title":"Improved maize reference genome with single-molecule technologies","display_name":"Improved maize reference genome with single-molecule technologies","publication_year":2017,"publication_date":"2017-06-01","ids":{"openalex":"https://openalex.org/W2623168030","doi":"https://doi.org/10.1038/nature22971","mag":"2623168030","pmid":"https://pubmed.ncbi.nlm.nih.gov/28605751"},"language":"en","primary_location":{"id":"doi:10.1038/nature22971","is_oa":true,"landing_page_url":"https://doi.org/10.1038/nature22971","pdf_url":null,"source":{"id":"https://openalex.org/S137773608","display_name":"Nature","issn_l":"0028-0836","issn":["0028-0836","1476-4687"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1038/nature22971","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091690972","display_name":"Yinping Jiao","orcid":"https://orcid.org/0000-0002-6016-9639"},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yinping Jiao","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009938495","display_name":"Paul Peluso","orcid":"https://orcid.org/0000-0002-9723-5185"},"institutions":[{"id":"https://openalex.org/I68554272","display_name":"Pacific Biosciences (United States)","ror":"https://ror.org/00fcszb13","country_code":"US","type":"company","lineage":["https://openalex.org/I68554272"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Paul Peluso","raw_affiliation_strings":["Pacific Biosciences, Menlo Park, California 94025, USA","Pacific Biosciences, Menlo Park, 94025, California, USA"],"affiliations":[{"raw_affiliation_string":"Pacific Biosciences, Menlo Park, California 94025, USA","institution_ids":["https://openalex.org/I68554272"]},{"raw_affiliation_string":"Pacific Biosciences, Menlo Park, 94025, California, USA","institution_ids":["https://openalex.org/I68554272"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102731839","display_name":"Jinghua Shi","orcid":"https://orcid.org/0000-0001-5989-1029"},"institutions":[{"id":"https://openalex.org/I4210099505","display_name":"BioNano Genomics (United States)","ror":"https://ror.org/014pv7733","country_code":"US","type":"company","lineage":["https://openalex.org/I4210099505"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jinghua Shi","raw_affiliation_strings":["BioNano Genomics, San Diego, California 92121, USA","BioNano Genomics, San Diego, 92121, California, USA"],"affiliations":[{"raw_affiliation_string":"BioNano Genomics, San Diego, California 92121, USA","institution_ids":["https://openalex.org/I4210099505"]},{"raw_affiliation_string":"BioNano Genomics, San Diego, 92121, California, USA","institution_ids":["https://openalex.org/I4210099505"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083791474","display_name":"Tiffany Y Liang","orcid":"https://orcid.org/0000-0002-1986-5966"},"institutions":[{"id":"https://openalex.org/I4210099505","display_name":"BioNano Genomics (United States)","ror":"https://ror.org/014pv7733","country_code":"US","type":"company","lineage":["https://openalex.org/I4210099505"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tiffany Liang","raw_affiliation_strings":["BioNano Genomics, San Diego, California 92121, USA","BioNano Genomics, San Diego, 92121, California, USA"],"affiliations":[{"raw_affiliation_string":"BioNano Genomics, San Diego, California 92121, USA","institution_ids":["https://openalex.org/I4210099505"]},{"raw_affiliation_string":"BioNano Genomics, San Diego, 92121, California, USA","institution_ids":["https://openalex.org/I4210099505"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041038026","display_name":"Michelle C. Stitzer","orcid":"https://orcid.org/0000-0003-4140-3765"},"institutions":[{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michelle C. Stitzer","raw_affiliation_strings":["Department of Plant Sciences and Center for Population Biology, University of California, Davis, Davis, California 95616, USA","Department of Plant Sciences and Center for Population Biology, University of California, Davis, Davis, 95616, California, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Sciences and Center for Population Biology, University of California, Davis, Davis, California 95616, USA","institution_ids":[]},{"raw_affiliation_string":"Department of Plant Sciences and Center for Population Biology, University of California, Davis, Davis, 95616, California, USA","institution_ids":["https://openalex.org/I84218800"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049840855","display_name":"Bo Wang","orcid":"https://orcid.org/0000-0002-0912-294X"},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bo Wang","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105367657","display_name":"Michael S. Campbell","orcid":null},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael S. Campbell","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060224302","display_name":"Joshua C. Stein","orcid":"https://orcid.org/0000-0003-0028-5563"},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joshua C. Stein","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036870282","display_name":"Xuehong Wei","orcid":"https://orcid.org/0000-0002-4585-3264"},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xuehong Wei","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000764422","display_name":"Chen-Shan Chin","orcid":"https://orcid.org/0000-0003-4394-2455"},"institutions":[{"id":"https://openalex.org/I68554272","display_name":"Pacific Biosciences (United States)","ror":"https://ror.org/00fcszb13","country_code":"US","type":"company","lineage":["https://openalex.org/I68554272"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chen-Shan Chin","raw_affiliation_strings":["Pacific Biosciences, Menlo Park, California 94025, USA","Pacific Biosciences, Menlo Park, 94025, California, USA"],"affiliations":[{"raw_affiliation_string":"Pacific Biosciences, Menlo Park, California 94025, USA","institution_ids":["https://openalex.org/I68554272"]},{"raw_affiliation_string":"Pacific Biosciences, Menlo Park, 94025, California, USA","institution_ids":["https://openalex.org/I68554272"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034383737","display_name":"Katherine E. Guill","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Katherine Guill","raw_affiliation_strings":["USDA-ARS, Plant Genetics Research Unit, Columbia, Missouri 65211, USA","USDA-ARS, Plant Genetics Research Unit, Columbia, 65211, Missouri, USA"],"affiliations":[{"raw_affiliation_string":"USDA-ARS, Plant Genetics Research Unit, Columbia, Missouri 65211, USA","institution_ids":[]},{"raw_affiliation_string":"USDA-ARS, Plant Genetics Research Unit, Columbia, 65211, Missouri, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023704009","display_name":"Michael Regulski","orcid":null},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Regulski","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101597727","display_name":"Sunita Kumari","orcid":"https://orcid.org/0000-0001-9166-1450"},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sunita Kumari","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089477212","display_name":"Andrew Olson","orcid":"https://orcid.org/0000-0003-4946-9021"},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andrew Olson","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032237809","display_name":"Jonathan I. Gent","orcid":"https://orcid.org/0000-0002-3584-7717"},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jonathan Gent","raw_affiliation_strings":["University of Georgia, Athens, Georgia 30602, USA","University of Georgia, Athens, 30602, Georgia, USA"],"affiliations":[{"raw_affiliation_string":"University of Georgia, Athens, Georgia 30602, USA","institution_ids":["https://openalex.org/I165733156"]},{"raw_affiliation_string":"University of Georgia, Athens, 30602, Georgia, USA","institution_ids":["https://openalex.org/I165733156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102771063","display_name":"Kevin Schneider","orcid":"https://orcid.org/0000-0003-4029-2995"},"institutions":[{"id":"https://openalex.org/I1331384533","display_name":"University of Hawaii System","ror":"https://ror.org/03tzaeb71","country_code":"US","type":"education","lineage":["https://openalex.org/I1331384533"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kevin L. Schneider","raw_affiliation_strings":["Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, Hawaii 96822, USA","Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, 96822, Hawaii, USA"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, Hawaii 96822, USA","institution_ids":["https://openalex.org/I1331384533"]},{"raw_affiliation_string":"Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, 96822, Hawaii, USA","institution_ids":["https://openalex.org/I1331384533"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017434632","display_name":"Thomas Wolfgruber","orcid":"https://orcid.org/0000-0001-8770-1800"},"institutions":[{"id":"https://openalex.org/I1331384533","display_name":"University of Hawaii System","ror":"https://ror.org/03tzaeb71","country_code":"US","type":"education","lineage":["https://openalex.org/I1331384533"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas K. Wolfgruber","raw_affiliation_strings":["Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, Hawaii 96822, USA","Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, 96822, Hawaii, USA"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, Hawaii 96822, USA","institution_ids":["https://openalex.org/I1331384533"]},{"raw_affiliation_string":"Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, 96822, Hawaii, USA","institution_ids":["https://openalex.org/I1331384533"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048604672","display_name":"Michael R. May","orcid":"https://orcid.org/0000-0002-5031-4820"},"institutions":[{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael R. May","raw_affiliation_strings":["Department of Evolution and Ecology, University of California, Davis, California 95616, USA","Department of Evolution and Ecology, University of California, Davis, 95616, California, USA"],"affiliations":[{"raw_affiliation_string":"Department of Evolution and Ecology, University of California, Davis, California 95616, USA","institution_ids":["https://openalex.org/I84218800"]},{"raw_affiliation_string":"Department of Evolution and Ecology, University of California, Davis, 95616, California, USA","institution_ids":["https://openalex.org/I84218800"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023378154","display_name":"Nathan M. Springer","orcid":"https://orcid.org/0000-0002-7301-4759"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nathan M. Springer","raw_affiliation_strings":["Department of Plant Biology, University of Minnesota, St Paul, Minnesota 55108, USA","Department of Plant Biology, University of Minnesota, St Paul, 55108, Minnesota, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Biology, University of Minnesota, St Paul, Minnesota 55108, USA","institution_ids":["https://openalex.org/I130238516"]},{"raw_affiliation_string":"Department of Plant Biology, University of Minnesota, St Paul, 55108, Minnesota, USA","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073327718","display_name":"Eric Antoniou","orcid":null},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric Antoniou","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068226921","display_name":"W. Richard McCombie","orcid":"https://orcid.org/0000-0003-1899-0682"},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"W. Richard McCombie","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA","institution_ids":["https://openalex.org/I2750212522"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062913195","display_name":"Gernot G. Presting","orcid":null},"institutions":[{"id":"https://openalex.org/I1331384533","display_name":"University of Hawaii System","ror":"https://ror.org/03tzaeb71","country_code":"US","type":"education","lineage":["https://openalex.org/I1331384533"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gernot G. Presting","raw_affiliation_strings":["Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, Hawaii 96822, USA","Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, 96822, Hawaii, USA"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, Hawaii 96822, USA","institution_ids":["https://openalex.org/I1331384533"]},{"raw_affiliation_string":"Department of Molecular Biosciences and Bioengineering, University of Hawaii, Honolulu, 96822, Hawaii, USA","institution_ids":["https://openalex.org/I1331384533"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109839419","display_name":"Michael D. McMullen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael McMullen","raw_affiliation_strings":["USDA-ARS, Plant Genetics Research Unit, Columbia, Missouri 65211, USA","USDA-ARS, Plant Genetics Research Unit, Columbia, 65211, Missouri, USA"],"affiliations":[{"raw_affiliation_string":"USDA-ARS, Plant Genetics Research Unit, Columbia, Missouri 65211, USA","institution_ids":[]},{"raw_affiliation_string":"USDA-ARS, Plant Genetics Research Unit, Columbia, 65211, Missouri, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083430943","display_name":"Jeffrey Ross\u2010Ibarra","orcid":"https://orcid.org/0000-0003-1656-4954"},"institutions":[{"id":"https://openalex.org/I84218800","display_name":"University of California, Davis","ror":"https://ror.org/05rrcem69","country_code":"US","type":"education","lineage":["https://openalex.org/I84218800"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeffrey Ross-Ibarra","raw_affiliation_strings":["Department of Plant Sciences, Center for Population Biology, and Genome Center, University of California, Davis, California 95616, USA","Department of Plant Sciences, Center for Population Biology, and Genome Center, University of California, Davis, 95616, California, USA"],"affiliations":[{"raw_affiliation_string":"Department of Plant Sciences, Center for Population Biology, and Genome Center, University of California, Davis, California 95616, USA","institution_ids":[]},{"raw_affiliation_string":"Department of Plant Sciences, Center for Population Biology, and Genome Center, University of California, Davis, 95616, California, USA","institution_ids":["https://openalex.org/I84218800"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002828396","display_name":"R. Kelly Dawe","orcid":"https://orcid.org/0000-0003-3407-4553"},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R. Kelly Dawe","raw_affiliation_strings":["University of Georgia, Athens, Georgia 30602, USA","University of Georgia, Athens, 30602, Georgia, USA"],"affiliations":[{"raw_affiliation_string":"University of Georgia, Athens, Georgia 30602, USA","institution_ids":["https://openalex.org/I165733156"]},{"raw_affiliation_string":"University of Georgia, Athens, 30602, Georgia, USA","institution_ids":["https://openalex.org/I165733156"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028045530","display_name":"Alex Hastie","orcid":"https://orcid.org/0000-0001-5829-2649"},"institutions":[{"id":"https://openalex.org/I4210099505","display_name":"BioNano Genomics (United States)","ror":"https://ror.org/014pv7733","country_code":"US","type":"company","lineage":["https://openalex.org/I4210099505"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alex Hastie","raw_affiliation_strings":["BioNano Genomics, San Diego, California 92121, USA","BioNano Genomics, San Diego, 92121, California, USA"],"affiliations":[{"raw_affiliation_string":"BioNano Genomics, San Diego, California 92121, USA","institution_ids":["https://openalex.org/I4210099505"]},{"raw_affiliation_string":"BioNano Genomics, San Diego, 92121, California, USA","institution_ids":["https://openalex.org/I4210099505"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060621653","display_name":"David R. Rank","orcid":"https://orcid.org/0000-0001-9213-6965"},"institutions":[{"id":"https://openalex.org/I68554272","display_name":"Pacific Biosciences (United States)","ror":"https://ror.org/00fcszb13","country_code":"US","type":"company","lineage":["https://openalex.org/I68554272"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David R. Rank","raw_affiliation_strings":["Pacific Biosciences, Menlo Park, California 94025, USA","Pacific Biosciences, Menlo Park, 94025, California, USA"],"affiliations":[{"raw_affiliation_string":"Pacific Biosciences, Menlo Park, California 94025, USA","institution_ids":["https://openalex.org/I68554272"]},{"raw_affiliation_string":"Pacific Biosciences, Menlo Park, 94025, California, USA","institution_ids":["https://openalex.org/I68554272"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077105419","display_name":"Doreen Ware","orcid":"https://orcid.org/0000-0002-8125-3821"},"institutions":[{"id":"https://openalex.org/I2750212522","display_name":"Cold Spring Harbor Laboratory","ror":"https://ror.org/02qz8b764","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2750212522"]},{"id":"https://openalex.org/I205783295","display_name":"Cornell University","ror":"https://ror.org/05bnh6r87","country_code":"US","type":"education","lineage":["https://openalex.org/I205783295"]},{"id":"https://openalex.org/I4210142299","display_name":"Robert W. Holley Center for Agriculture & Health","ror":"https://ror.org/050z40a57","country_code":"US","type":"facility","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210138094","https://openalex.org/I4210142299"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Doreen Ware","raw_affiliation_strings":["Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","USDA-ARS, NEA Robert W. Holley Center for Agriculture and Health, Cornell University, Ithaca, New York 14853, USA","USDA-ARS, NEA Robert W. Holley Center for Agriculture and Health, Cornell University, Ithaca, 14853, New York, USA"],"affiliations":[{"raw_affiliation_string":"Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA","institution_ids":["https://openalex.org/I2750212522"]},{"raw_affiliation_string":"USDA-ARS, NEA Robert W. Holley Center for Agriculture and Health, Cornell University, Ithaca, New York 14853, USA","institution_ids":[]},{"raw_affiliation_string":"USDA-ARS, NEA Robert W. Holley Center for Agriculture and Health, Cornell University, Ithaca, 14853, New York, USA","institution_ids":["https://openalex.org/I4210142299","https://openalex.org/I205783295"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":28,"corresponding_author_ids":["https://openalex.org/A5077105419"],"corresponding_institution_ids":["https://openalex.org/I205783295","https://openalex.org/I2750212522","https://openalex.org/I4210142299"],"apc_list":{"value":9750,"currency":"EUR","value_usd":11690},"apc_paid":{"value":9750,"currency":"EUR","value_usd":11690},"fwci":60.655,"has_fulltext":false,"cited_by_count":1337,"citation_normalized_percentile":{"value":0.99953941,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"546","issue":"7659","first_page":"524","last_page":"527"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12858","display_name":"Plant Disease Resistance and Genetics","score":0.9805999994277954,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.8311867713928223},{"id":"https://openalex.org/keywords/transposable-element","display_name":"Transposable element","score":0.7630033493041992},{"id":"https://openalex.org/keywords/reference-genome","display_name":"Reference genome","score":0.6995669603347778},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6850242018699646},{"id":"https://openalex.org/keywords/contig","display_name":"Contig","score":0.6432949304580688},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5481486916542053},{"id":"https://openalex.org/keywords/sequence-assembly","display_name":"Sequence assembly","score":0.5095193982124329},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.49636322259902954},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.49383077025413513},{"id":"https://openalex.org/keywords/lineage","display_name":"Lineage (genetic)","score":0.4557863771915436},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4272924065589905},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.422971248626709},{"id":"https://openalex.org/keywords/genome-project","display_name":"Genome project","score":0.4193304777145386}],"concepts":[{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.8311867713928223},{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.7630033493041992},{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.6995669603347778},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6850242018699646},{"id":"https://openalex.org/C59582021","wikidata":"https://www.wikidata.org/wiki/Q1128751","display_name":"Contig","level":4,"score":0.6432949304580688},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5481486916542053},{"id":"https://openalex.org/C18949551","wikidata":"https://www.wikidata.org/wiki/Q740578","display_name":"Sequence assembly","level":5,"score":0.5095193982124329},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.49636322259902954},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.49383077025413513},{"id":"https://openalex.org/C2776817793","wikidata":"https://www.wikidata.org/wiki/Q6553369","display_name":"Lineage (genetic)","level":3,"score":0.4557863771915436},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4272924065589905},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.422971248626709},{"id":"https://openalex.org/C89566754","wikidata":"https://www.wikidata.org/wiki/Q2273828","display_name":"Genome project","level":4,"score":0.4193304777145386},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000072760","descriptor_name":"Single Molecule Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000072760","descriptor_name":"Single Molecule Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D000072760","descriptor_name":"Single Molecule Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D002503","descriptor_name":"Centromere","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002503","descriptor_name":"Centromere","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002503","descriptor_name":"Centromere","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003313","descriptor_name":"Zea mays","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003313","descriptor_name":"Zea mays","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003313","descriptor_name":"Zea mays","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004251","descriptor_name":"DNA Transposable Elements","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018745","descriptor_name":"Genome, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020451","descriptor_name":"Contig Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020451","descriptor_name":"Contig Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020451","descriptor_name":"Contig Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021901","descriptor_name":"DNA, Intergenic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D021901","descriptor_name":"DNA, Intergenic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D021901","descriptor_name":"DNA, Intergenic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D032461","descriptor_name":"Chromosomes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D032461","descriptor_name":"Chromosomes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D032461","descriptor_name":"Chromosomes, Plant","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D045868","descriptor_name":"Sorghum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D045868","descriptor_name":"Sorghum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D045868","descriptor_name":"Sorghum","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055095","descriptor_name":"Optics and Photonics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055095","descriptor_name":"Optics and Photonics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055095","descriptor_name":"Optics and Photonics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1038/nature22971","is_oa":true,"landing_page_url":"https://doi.org/10.1038/nature22971","pdf_url":null,"source":{"id":"https://openalex.org/S137773608","display_name":"Nature","issn_l":"0028-0836","issn":["0028-0836","1476-4687"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature","raw_type":"journal-article"},{"id":"pmid:28605751","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28605751","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature","raw_type":null},{"id":"pmh:oai:repository.cshl.edu:35009","is_oa":false,"landing_page_url":"http://repository.cshl.edu/id/eprint/35009/","pdf_url":null,"source":{"id":"https://openalex.org/S4306402288","display_name":"Cold Spring Harbor Laboratory Institutional Repository (Cold Spring Harbor Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2750212522","host_organization_name":"Cold Spring Harbor Laboratory","host_organization_lineage":["https://openalex.org/I2750212522"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Paper"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt7c45d4qb","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/7c45d4qb","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nature, vol 546, iss 7659","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5999018","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7052699","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1038/nature22971","is_oa":true,"landing_page_url":"https://doi.org/10.1038/nature22971","pdf_url":null,"source":{"id":"https://openalex.org/S137773608","display_name":"Nature","issn_l":"0028-0836","issn":["0028-0836","1476-4687"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319908","host_organization_name":"Nature Portfolio","host_organization_lineage":["https://openalex.org/P4310319908","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Nature Portfolio","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nature","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.8299999833106995}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":51,"referenced_works":["https://openalex.org/W1579534339","https://openalex.org/W1791377616","https://openalex.org/W1935035262","https://openalex.org/W1976074780","https://openalex.org/W1980340421","https://openalex.org/W1980577355","https://openalex.org/W1980702263","https://openalex.org/W1982855075","https://openalex.org/W1997270596","https://openalex.org/W2001293313","https://openalex.org/W2014704298","https://openalex.org/W2021977030","https://openalex.org/W2024278789","https://openalex.org/W2026519705","https://openalex.org/W2028215843","https://openalex.org/W2042827641","https://openalex.org/W2048303803","https://openalex.org/W2048568138","https://openalex.org/W2054254276","https://openalex.org/W2055966372","https://openalex.org/W2076092946","https://openalex.org/W2076658876","https://openalex.org/W2098919825","https://openalex.org/W2103441770","https://openalex.org/W2105830502","https://openalex.org/W2107282968","https://openalex.org/W2108234281","https://openalex.org/W2112179149","https://openalex.org/W2113770183","https://openalex.org/W2123090635","https://openalex.org/W2129003604","https://openalex.org/W2133043955","https://openalex.org/W2134339010","https://openalex.org/W2134783286","https://openalex.org/W2142819802","https://openalex.org/W2152173655","https://openalex.org/W2154126034","https://openalex.org/W2155340974","https://openalex.org/W2157117058","https://openalex.org/W2160097598","https://openalex.org/W2162531367","https://openalex.org/W2169859562","https://openalex.org/W2170551349","https://openalex.org/W2171192872","https://openalex.org/W2264853789","https://openalex.org/W2345920351","https://openalex.org/W2405567513","https://openalex.org/W2463761386","https://openalex.org/W2538143681","https://openalex.org/W2547405129","https://openalex.org/W4255659575"],"related_works":["https://openalex.org/W54719527","https://openalex.org/W2327661880","https://openalex.org/W2480204629","https://openalex.org/W4225379983","https://openalex.org/W3179112149","https://openalex.org/W2128222086","https://openalex.org/W4210830088","https://openalex.org/W3088056938","https://openalex.org/W2925048800","https://openalex.org/W1975465622"],"abstract_inverted_index":{"Complete":[0],"and":[1,5,14,25,33,56,66,76,84,103,112,177],"accurate":[2],"reference":[3,38,70,92],"genomes":[4,39,52],"annotations":[6,143],"provide":[7],"fundamental":[8],"tools":[9],"for":[10,40],"characterization":[11],"of":[12,22,28,68,72,109,115,119,160,169,173],"genetic":[13,75],"functional":[15],"variation.":[16],"These":[17],"resources":[18],"facilitate":[19],"the":[20,47,64,90,107,116,120],"determination":[21],"biological":[23],"processes":[24],"support":[26],"translation":[27],"research":[29],"findings":[30],"into":[31],"improved":[32],"sustainable":[34],"agricultural":[35,77],"technologies.":[36],"Many":[37],"crop":[41],"plants":[42],"have":[43],"been":[44],"generated":[45],"over":[46],"past":[48],"decade,":[49],"but":[50],"these":[51],"are":[53,138],"often":[54],"fragmented":[55],"missing":[57],"complex":[58],"repeat":[59],"regions.":[60],"Here":[61],"we":[62],"report":[63],"assembly":[65,95,108],"annotation":[67],"a":[69,74,97,167],"genome":[71,121],"maize,":[73],"model":[78],"species,":[79],"using":[80,146],"single-molecule":[81,152],"real-time":[82,153],"sequencing":[83],"high-resolution":[85],"optical":[86,158],"mapping.":[87],"Relative":[88],"to":[89,131,140],"previous":[91],"genome,":[93],"our":[94],"features":[96],"52-fold":[98],"increase":[99],"in":[100,106,171],"contig":[101],"length":[102],"notable":[104],"improvements":[105],"intergenic":[110],"spaces":[111],"centromeres.":[113],"Characterization":[114],"repetitive":[117],"portion":[118],"revealed":[122,166],"more":[123],"than":[124],"130,000":[125],"intact":[126],"transposable":[127,133],"elements,":[128],"allowing":[129],"us":[130],"identify":[132],"element":[134],"lineage":[135],"expansions":[136],"that":[137],"unique":[139],"maize.":[141],"Gene":[142],"were":[144],"updated":[145],"111,000":[147],"full-length":[148],"transcripts":[149],"obtained":[150],"by":[151],"sequencing.":[154],"In":[155],"addition,":[156],"comparative":[157],"mapping":[159],"two":[161],"other":[162],"inbred":[163],"maize":[164,178],"lines":[165],"prevalence":[168],"deletions":[170],"regions":[172],"low":[174],"gene":[175],"density":[176],"lineage-specific":[179],"genes.":[180]},"counts_by_year":[{"year":2026,"cited_by_count":19},{"year":2025,"cited_by_count":93},{"year":2024,"cited_by_count":134},{"year":2023,"cited_by_count":136},{"year":2022,"cited_by_count":174},{"year":2021,"cited_by_count":250},{"year":2020,"cited_by_count":206},{"year":2019,"cited_by_count":165},{"year":2018,"cited_by_count":121},{"year":2017,"cited_by_count":38}],"updated_date":"2026-03-21T08:13:44.787528","created_date":"2025-10-10T00:00:00"}