{"id":"https://openalex.org/W1999152593","doi":"https://doi.org/10.1021/ci900229c","title":"Do Biologically Relevant Compounds Have More Chance To Be Drugs?","display_name":"Do Biologically Relevant Compounds Have More Chance To Be Drugs?","publication_year":2009,"publication_date":"2009-09-24","ids":{"openalex":"https://openalex.org/W1999152593","doi":"https://doi.org/10.1021/ci900229c","mag":"1999152593","pmid":"https://pubmed.ncbi.nlm.nih.gov/19852515"},"language":"en","primary_location":{"id":"doi:10.1021/ci900229c","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci900229c","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081833384","display_name":"Kong De","orcid":"https://orcid.org/0000-0003-0744-116X"},"institutions":[{"id":"https://openalex.org/I119203015","display_name":"Shandong University of Technology","ror":"https://ror.org/02mr3ar13","country_code":"CN","type":"education","lineage":["https://openalex.org/I119203015"]},{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"De-Xin Kong","raw_affiliation_strings":["College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China, and Shandong Provincial Research Center for Bioinformatics Engineering and Technique, Center for Advanced Study, Shandong University of Technology, Zibo 255049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China, and Shandong Provincial Research Center for Bioinformatics Engineering and Technique, Center for Advanced Study, Shandong University of Technology, Zibo 255049, China","institution_ids":["https://openalex.org/I119203015","https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007265691","display_name":"Wei Ren","orcid":"https://orcid.org/0000-0001-7317-3867"},"institutions":[{"id":"https://openalex.org/I119203015","display_name":"Shandong University of Technology","ror":"https://ror.org/02mr3ar13","country_code":"CN","type":"education","lineage":["https://openalex.org/I119203015"]},{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Ren","raw_affiliation_strings":["College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China, and Shandong Provincial Research Center for Bioinformatics Engineering and Technique, Center for Advanced Study, Shandong University of Technology, Zibo 255049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China, and Shandong Provincial Research Center for Bioinformatics Engineering and Technique, Center for Advanced Study, Shandong University of Technology, Zibo 255049, China","institution_ids":["https://openalex.org/I119203015","https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034338177","display_name":"Wei L\u00fc","orcid":"https://orcid.org/0000-0003-3041-9200"},"institutions":[{"id":"https://openalex.org/I119203015","display_name":"Shandong University of Technology","ror":"https://ror.org/02mr3ar13","country_code":"CN","type":"education","lineage":["https://openalex.org/I119203015"]},{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei L\u00fc","raw_affiliation_strings":["College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China, and Shandong Provincial Research Center for Bioinformatics Engineering and Technique, Center for Advanced Study, Shandong University of Technology, Zibo 255049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China, and Shandong Provincial Research Center for Bioinformatics Engineering and Technique, Center for Advanced Study, Shandong University of Technology, Zibo 255049, China","institution_ids":["https://openalex.org/I119203015","https://openalex.org/I204823248"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100412608","display_name":"Hongyu Zhang","orcid":"https://orcid.org/0000-0002-8078-4401"},"institutions":[{"id":"https://openalex.org/I119203015","display_name":"Shandong University of Technology","ror":"https://ror.org/02mr3ar13","country_code":"CN","type":"education","lineage":["https://openalex.org/I119203015"]},{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hong-Yu Zhang","raw_affiliation_strings":["College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China, and Shandong Provincial Research Center for Bioinformatics Engineering and Technique, Center for Advanced Study, Shandong University of Technology, Zibo 255049, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China, and Shandong Provincial Research Center for Bioinformatics Engineering and Technique, Center for Advanced Study, Shandong University of Technology, Zibo 255049, China","institution_ids":["https://openalex.org/I119203015","https://openalex.org/I204823248"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5081833384"],"corresponding_institution_ids":["https://openalex.org/I119203015","https://openalex.org/I204823248"],"apc_list":null,"apc_paid":null,"fwci":2.8364,"has_fulltext":false,"cited_by_count":23,"citation_normalized_percentile":{"value":0.89932422,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"49","issue":"10","first_page":"2376","last_page":"2381"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.6032748818397522},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.5227549076080322},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.46616655588150024},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.4643993675708771},{"id":"https://openalex.org/keywords/drug-development","display_name":"Drug development","score":0.46190720796585083},{"id":"https://openalex.org/keywords/toxicology","display_name":"Toxicology","score":0.3376978039741516},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22654390335083008},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.10538488626480103}],"concepts":[{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.6032748818397522},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.5227549076080322},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.46616655588150024},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.4643993675708771},{"id":"https://openalex.org/C64903051","wikidata":"https://www.wikidata.org/wiki/Q2198549","display_name":"Drug development","level":3,"score":0.46190720796585083},{"id":"https://openalex.org/C33070731","wikidata":"https://www.wikidata.org/wiki/Q7218","display_name":"Toxicology","level":1,"score":0.3376978039741516},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22654390335083008},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.10538488626480103}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001688","descriptor_name":"Biological Products","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D001688","descriptor_name":"Biological Products","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D001688","descriptor_name":"Biological Products","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1021/ci900229c","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci900229c","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:19852515","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19852515","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":56,"referenced_works":["https://openalex.org/W1504523189","https://openalex.org/W1519921040","https://openalex.org/W1592483428","https://openalex.org/W1778675583","https://openalex.org/W1967225297","https://openalex.org/W1970859533","https://openalex.org/W1973424783","https://openalex.org/W1976451754","https://openalex.org/W1983610905","https://openalex.org/W1989431509","https://openalex.org/W1993133483","https://openalex.org/W2000905540","https://openalex.org/W2009586290","https://openalex.org/W2010630721","https://openalex.org/W2018408116","https://openalex.org/W2023690202","https://openalex.org/W2025248574","https://openalex.org/W2031913739","https://openalex.org/W2038617772","https://openalex.org/W2039965018","https://openalex.org/W2041620837","https://openalex.org/W2046564413","https://openalex.org/W2051597374","https://openalex.org/W2053355118","https://openalex.org/W2054302439","https://openalex.org/W2054912906","https://openalex.org/W2060581674","https://openalex.org/W2062458432","https://openalex.org/W2063567677","https://openalex.org/W2064963922","https://openalex.org/W2071853918","https://openalex.org/W2080245527","https://openalex.org/W2081525633","https://openalex.org/W2086070714","https://openalex.org/W2089589794","https://openalex.org/W2103776834","https://openalex.org/W2112452502","https://openalex.org/W2116347166","https://openalex.org/W2125253492","https://openalex.org/W2126662293","https://openalex.org/W2128404766","https://openalex.org/W2129010073","https://openalex.org/W2140000393","https://openalex.org/W2140595402","https://openalex.org/W2141474275","https://openalex.org/W2142328147","https://openalex.org/W2151028167","https://openalex.org/W2154975605","https://openalex.org/W2156884792","https://openalex.org/W2157619122","https://openalex.org/W2165674132","https://openalex.org/W2166836124","https://openalex.org/W2170928471","https://openalex.org/W2206840988","https://openalex.org/W4236806600","https://openalex.org/W4248107770"],"related_works":["https://openalex.org/W2480711475","https://openalex.org/W4206379684","https://openalex.org/W2061997414","https://openalex.org/W1587522533","https://openalex.org/W2366105490","https://openalex.org/W2580680567","https://openalex.org/W2121182182","https://openalex.org/W2127264463","https://openalex.org/W2764191054","https://openalex.org/W1585256759"],"abstract_inverted_index":{"To":[0],"prove":[1],"the":[2,41,45,50,63,89,94,100,105,115],"innate":[3],"advantages":[4],"of":[5,44],"endogenous":[6],"compounds/fragments":[7],"for":[8,60],"drug":[9,35,90],"discovery":[10],"and":[11,37,123,129],"development,":[12],"a":[13],"novel":[14],"index":[15],"termed":[16],"biological":[17],"relevance":[18],"(BR)":[19],"is":[20,97],"proposed.":[21],"The":[22],"results":[23,77],"clearly":[24],"indicate":[25],"its":[26],"ability":[27],"to":[28,87],"distinguish":[29],"between":[30,121],"synthetic":[31],"chemicals,":[32],"bioactive":[33],"compounds,":[34],"candidates,":[36],"launched":[38],"drugs.":[39],"Primarily,":[40],"average":[42,70],"BR":[43,71,83,111,122],"databases":[46],"investigated":[47],"decreases":[48],"in":[49,104,114],"order":[51],"DNP":[52],">":[53,55,57],"CMC":[54],"ACD-3D":[56],"MDDR.":[58],"Second,":[59],"compounds":[61,80,103],"with":[62,81],"same":[64],"bioactivity,":[65],"drugs":[66],"(CMC)":[67],"possess":[68,109],"higher":[69,82,110],"than":[72,112],"their":[73],"candidates":[74],"(MDDR).":[75],"These":[76],"suggest":[78],"that":[79,102],"have":[84],"more":[85],"chance":[86],"survive":[88],"development":[91,107],"pipeline.":[92],"Third,":[93],"above":[95],"conclusion":[96],"supported":[98],"by":[99],"fact":[101],"later":[106],"phases":[108],"those":[113],"earlier":[116],"phases.":[117],"Comparisons":[118],"were":[119],"made":[120],"other":[124],"indices,":[125],"including":[126],"toxicity,":[127],"druglikeness,":[128],"natural":[130],"productlikeness.":[131]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":3}],"updated_date":"2026-06-15T08:34:33.830935","created_date":"2025-10-10T00:00:00"}
