{"id":"https://openalex.org/W2025421550","doi":"https://doi.org/10.1021/ci900117m","title":"Comparison Data Sets for Benchmarking QSAR Methodologies in Lead Optimization","display_name":"Comparison Data Sets for Benchmarking QSAR Methodologies in Lead Optimization","publication_year":2009,"publication_date":"2009-07-02","ids":{"openalex":"https://openalex.org/W2025421550","doi":"https://doi.org/10.1021/ci900117m","mag":"2025421550","pmid":"https://pubmed.ncbi.nlm.nih.gov/19569715"},"language":"en","primary_location":{"id":"doi:10.1021/ci900117m","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci900117m","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015588591","display_name":"Ruchi Mittal","orcid":"https://orcid.org/0000-0002-6607-5107"},"institutions":[{"id":"https://openalex.org/I170239107","display_name":"University of South Australia","ror":"https://ror.org/01p93h210","country_code":"AU","type":"education","lineage":["https://openalex.org/I170239107"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Ruchi R. Mittal","raw_affiliation_strings":["Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia, Adelaide, South Australia 5000, Australia","Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia , Adelaide, South Australia 5000, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia, Adelaide, South Australia 5000, Australia","institution_ids":["https://openalex.org/I170239107"]},{"raw_affiliation_string":"Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia , Adelaide, South Australia 5000, Australia","institution_ids":["https://openalex.org/I170239107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055670639","display_name":"Ross A. McKinnon","orcid":"https://orcid.org/0000-0002-3725-793X"},"institutions":[{"id":"https://openalex.org/I170239107","display_name":"University of South Australia","ror":"https://ror.org/01p93h210","country_code":"AU","type":"education","lineage":["https://openalex.org/I170239107"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Ross A. McKinnon","raw_affiliation_strings":["Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia, Adelaide, South Australia 5000, Australia","Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia , Adelaide, South Australia 5000, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia, Adelaide, South Australia 5000, Australia","institution_ids":["https://openalex.org/I170239107"]},{"raw_affiliation_string":"Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia , Adelaide, South Australia 5000, Australia","institution_ids":["https://openalex.org/I170239107"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067594062","display_name":"Michael J. Sorich","orcid":"https://orcid.org/0000-0003-1999-866X"},"institutions":[{"id":"https://openalex.org/I170239107","display_name":"University of South Australia","ror":"https://ror.org/01p93h210","country_code":"AU","type":"education","lineage":["https://openalex.org/I170239107"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Michael J. Sorich","raw_affiliation_strings":["Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia, Adelaide, South Australia 5000, Australia","Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia , Adelaide, South Australia 5000, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia, Adelaide, South Australia 5000, Australia","institution_ids":["https://openalex.org/I170239107"]},{"raw_affiliation_string":"Sansom Institute, School of Pharmacy and Medical Sciences, University of South Australia , Adelaide, South Australia 5000, Australia","institution_ids":["https://openalex.org/I170239107"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5067594062"],"corresponding_institution_ids":["https://openalex.org/I170239107"],"apc_list":null,"apc_paid":null,"fwci":3.5257,"has_fulltext":false,"cited_by_count":28,"citation_normalized_percentile":{"value":0.92584536,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"49","issue":"7","first_page":"1810","last_page":"1820"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9908999800682068,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9908999800682068,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11053","display_name":"Process Optimization and Integration","score":0.9750999808311462,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11881","display_name":"Crystallization and Solubility Studies","score":0.9472000002861023,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/quantitative-structure\u2013activity-relationship","display_name":"Quantitative structure\u2013activity relationship","score":0.9057419896125793},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.856959342956543},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.7981072068214417},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6360822916030884},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5345344543457031},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.46083906292915344},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.4491361379623413},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.444587379693985},{"id":"https://openalex.org/keywords/lead","display_name":"Lead (geology)","score":0.4313521385192871},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41944336891174316},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.059168845415115356}],"concepts":[{"id":"https://openalex.org/C164126121","wikidata":"https://www.wikidata.org/wiki/Q766383","display_name":"Quantitative structure\u2013activity relationship","level":2,"score":0.9057419896125793},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.856959342956543},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.7981072068214417},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6360822916030884},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5345344543457031},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.46083906292915344},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.4491361379623413},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.444587379693985},{"id":"https://openalex.org/C2777093003","wikidata":"https://www.wikidata.org/wiki/Q6508345","display_name":"Lead (geology)","level":2,"score":0.4313521385192871},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41944336891174316},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.059168845415115356},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021281","descriptor_name":"Quantitative Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021281","descriptor_name":"Quantitative Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021281","descriptor_name":"Quantitative Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1021/ci900117m","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci900117m","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:19569715","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19569715","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:digital.library.adelaide.edu.au:2440/99245","is_oa":false,"landing_page_url":"http://hdl.handle.net/2440/99245","pdf_url":null,"source":{"id":"https://openalex.org/S4306401835","display_name":"Adelaide Research & Scholarship (AR&S) (University of Adelaide)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5681781","host_organization_name":"The University of Adelaide","host_organization_lineage":["https://openalex.org/I5681781"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://dx.doi.org/10.1021/ci900117m","raw_type":"Journal article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":54,"referenced_works":["https://openalex.org/W78154441","https://openalex.org/W1964953537","https://openalex.org/W1965064173","https://openalex.org/W1970043508","https://openalex.org/W1983475717","https://openalex.org/W1984290631","https://openalex.org/W1987163323","https://openalex.org/W1988771765","https://openalex.org/W1994271139","https://openalex.org/W1995020766","https://openalex.org/W2006796907","https://openalex.org/W2007302339","https://openalex.org/W2011703862","https://openalex.org/W2012887432","https://openalex.org/W2013090273","https://openalex.org/W2026356021","https://openalex.org/W2030067016","https://openalex.org/W2030375538","https://openalex.org/W2032245355","https://openalex.org/W2035060422","https://openalex.org/W2037167896","https://openalex.org/W2037430100","https://openalex.org/W2046311259","https://openalex.org/W2053058748","https://openalex.org/W2053506583","https://openalex.org/W2061288239","https://openalex.org/W2063060349","https://openalex.org/W2063229772","https://openalex.org/W2063388752","https://openalex.org/W2065010848","https://openalex.org/W2071958671","https://openalex.org/W2082014784","https://openalex.org/W2084446624","https://openalex.org/W2086693309","https://openalex.org/W2093714535","https://openalex.org/W2095691435","https://openalex.org/W2096346796","https://openalex.org/W2103406520","https://openalex.org/W2111918027","https://openalex.org/W2119349031","https://openalex.org/W2121451691","https://openalex.org/W2127760066","https://openalex.org/W2137104501","https://openalex.org/W2151063137","https://openalex.org/W2155631470","https://openalex.org/W2155810799","https://openalex.org/W2162141992","https://openalex.org/W2175730666","https://openalex.org/W2180515738","https://openalex.org/W2199235416","https://openalex.org/W2210383985","https://openalex.org/W2210512246","https://openalex.org/W4240326425","https://openalex.org/W4245355923"],"related_works":["https://openalex.org/W2593649365","https://openalex.org/W2950577464","https://openalex.org/W4381245711","https://openalex.org/W4302612983","https://openalex.org/W2025421550","https://openalex.org/W2896810366","https://openalex.org/W4289366676","https://openalex.org/W4287077734","https://openalex.org/W3170111948","https://openalex.org/W4300037694"],"abstract_inverted_index":{"2D":[0],"and":[1,59],"3D":[2],"QSAR":[3,37],"techniques":[4],"are":[5],"widely":[6],"used":[7,28],"in":[8,40],"lead":[9],"optimization-like":[10],"processes.":[11],"A":[12],"compilation":[13],"of":[14,36,42,46,56,62],"40":[15],"diverse":[16],"data":[17],"sets":[18],"is":[19,22],"described.":[20],"It":[21],"proposed":[23],"that":[24],"these":[25],"can":[26],"be":[27,51],"as":[29],"a":[30],"common":[31],"benchmark":[32,48],"sample":[33],"for":[34,53,60],"comparisons":[35],"methodologies,":[38],"primarily":[39],"terms":[41],"predictive":[43],"ability.":[44],"Use":[45],"this":[47],"set":[49],"will":[50],"useful":[52],"both":[54],"assessment":[55],"new":[57],"methods":[58],"optimization":[61],"existing":[63],"methods.":[64]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":5},{"year":2012,"cited_by_count":2}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
