{"id":"https://openalex.org/W2030204844","doi":"https://doi.org/10.1021/ci800174c","title":"Approved Drug Mimics of Short Peptide Ligands from Protein Interaction Motifs","display_name":"Approved Drug Mimics of Short Peptide Ligands from Protein Interaction Motifs","publication_year":2008,"publication_date":"2008-10-01","ids":{"openalex":"https://openalex.org/W2030204844","doi":"https://doi.org/10.1021/ci800174c","mag":"2030204844","pmid":"https://pubmed.ncbi.nlm.nih.gov/18826301"},"language":"en","primary_location":{"id":"doi:10.1021/ci800174c","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci800174c","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035686045","display_name":"Laavanya Parthasarathi","orcid":null},"institutions":[{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I4210122345","display_name":"Institute for Research in Biomedicine","ror":"https://ror.org/01z1gye03","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210122345","https://openalex.org/I4210132884","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Laavanya Parthasarathi","raw_affiliation_strings":["UCD Conway Institute of Biomolecular and Biomedical Research and UCD Complex and Adaptive Systems Laboratory, University College Dublin, Dublin 4, Republic of Ireland, Institute for Research in Biomedicine (IRB Barcelona) and Barcelona Supercomputing Center, c/ Baldiri i Reixac, 10-12, 08028 Barcelona, Spain, and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), 08010 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"UCD Conway Institute of Biomolecular and Biomedical Research and UCD Complex and Adaptive Systems Laboratory, University College Dublin, Dublin 4, Republic of Ireland, Institute for Research in Biomedicine (IRB Barcelona) and Barcelona Supercomputing Center, c/ Baldiri i Reixac, 10-12, 08028 Barcelona, Spain, and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), 08010 Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210122345","https://openalex.org/I11932220","https://openalex.org/I2799803557"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054920521","display_name":"Fergal Casey","orcid":"https://orcid.org/0000-0002-6781-8670"},"institutions":[{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I4210122345","display_name":"Institute for Research in Biomedicine","ror":"https://ror.org/01z1gye03","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210122345","https://openalex.org/I4210132884","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Fergal Casey","raw_affiliation_strings":["UCD Conway Institute of Biomolecular and Biomedical Research and UCD Complex and Adaptive Systems Laboratory, University College Dublin, Dublin 4, Republic of Ireland, Institute for Research in Biomedicine (IRB Barcelona) and Barcelona Supercomputing Center, c/ Baldiri i Reixac, 10-12, 08028 Barcelona, Spain, and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), 08010 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"UCD Conway Institute of Biomolecular and Biomedical Research and UCD Complex and Adaptive Systems Laboratory, University College Dublin, Dublin 4, Republic of Ireland, Institute for Research in Biomedicine (IRB Barcelona) and Barcelona Supercomputing Center, c/ Baldiri i Reixac, 10-12, 08028 Barcelona, Spain, and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), 08010 Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210122345","https://openalex.org/I11932220","https://openalex.org/I2799803557"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032625918","display_name":"Amelie Stein","orcid":"https://orcid.org/0000-0002-5862-1681"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I4210122345","display_name":"Institute for Research in Biomedicine","ror":"https://ror.org/01z1gye03","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210122345","https://openalex.org/I4210132884","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Amelie Stein","raw_affiliation_strings":["UCD Conway Institute of Biomolecular and Biomedical Research and UCD Complex and Adaptive Systems Laboratory, University College Dublin, Dublin 4, Republic of Ireland, Institute for Research in Biomedicine (IRB Barcelona) and Barcelona Supercomputing Center, c/ Baldiri i Reixac, 10-12, 08028 Barcelona, Spain, and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), 08010 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"UCD Conway Institute of Biomolecular and Biomedical Research and UCD Complex and Adaptive Systems Laboratory, University College Dublin, Dublin 4, Republic of Ireland, Institute for Research in Biomedicine (IRB Barcelona) and Barcelona Supercomputing Center, c/ Baldiri i Reixac, 10-12, 08028 Barcelona, Spain, and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), 08010 Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210122345","https://openalex.org/I11932220","https://openalex.org/I2799803557"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015088787","display_name":"Patrick Aloy","orcid":"https://orcid.org/0000-0002-3557-0236"},"institutions":[{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I4210122345","display_name":"Institute for Research in Biomedicine","ror":"https://ror.org/01z1gye03","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210122345","https://openalex.org/I4210132884","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Patrick Aloy","raw_affiliation_strings":["UCD Conway Institute of Biomolecular and Biomedical Research and UCD Complex and Adaptive Systems Laboratory, University College Dublin, Dublin 4, Republic of Ireland, Institute for Research in Biomedicine (IRB Barcelona) and Barcelona Supercomputing Center, c/ Baldiri i Reixac, 10-12, 08028 Barcelona, Spain, and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), 08010 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"UCD Conway Institute of Biomolecular and Biomedical Research and UCD Complex and Adaptive Systems Laboratory, University College Dublin, Dublin 4, Republic of Ireland, Institute for Research in Biomedicine (IRB Barcelona) and Barcelona Supercomputing Center, c/ Baldiri i Reixac, 10-12, 08028 Barcelona, Spain, and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), 08010 Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210122345","https://openalex.org/I11932220","https://openalex.org/I2799803557"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004065601","display_name":"Denis C. Shields","orcid":"https://orcid.org/0000-0003-4015-2474"},"institutions":[{"id":"https://openalex.org/I2799803557","display_name":"Barcelona Supercomputing Center","ror":"https://ror.org/05sd8tv96","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2799803557","https://openalex.org/I9617848"]},{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I4210122345","display_name":"Institute for Research in Biomedicine","ror":"https://ror.org/01z1gye03","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210122345","https://openalex.org/I4210132884","https://openalex.org/I4387153040"]},{"id":"https://openalex.org/I9617848","display_name":"Universitat Polit\u00e8cnica de Catalunya","ror":"https://ror.org/03mb6wj31","country_code":"ES","type":"education","lineage":["https://openalex.org/I9617848"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Denis C. Shields","raw_affiliation_strings":["UCD Conway Institute of Biomolecular and Biomedical Research and UCD Complex and Adaptive Systems Laboratory, University College Dublin, Dublin 4, Republic of Ireland, Institute for Research in Biomedicine (IRB Barcelona) and Barcelona Supercomputing Center, c/ Baldiri i Reixac, 10-12, 08028 Barcelona, Spain, and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), 08010 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"UCD Conway Institute of Biomolecular and Biomedical Research and UCD Complex and Adaptive Systems Laboratory, University College Dublin, Dublin 4, Republic of Ireland, Institute for Research in Biomedicine (IRB Barcelona) and Barcelona Supercomputing Center, c/ Baldiri i Reixac, 10-12, 08028 Barcelona, Spain, and Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), 08010 Barcelona, Spain","institution_ids":["https://openalex.org/I9617848","https://openalex.org/I4210122345","https://openalex.org/I11932220","https://openalex.org/I2799803557"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5035686045"],"corresponding_institution_ids":["https://openalex.org/I11932220","https://openalex.org/I2799803557","https://openalex.org/I4210122345","https://openalex.org/I9617848"],"apc_list":null,"apc_paid":null,"fwci":7.61,"has_fulltext":false,"cited_by_count":39,"citation_normalized_percentile":{"value":0.97401641,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"48","issue":"10","first_page":"1943","last_page":"1948"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11440","display_name":"Click Chemistry and Applications","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pharmacophore","display_name":"Pharmacophore","score":0.8578988313674927},{"id":"https://openalex.org/keywords/autodock","display_name":"AutoDock","score":0.6905733346939087},{"id":"https://openalex.org/keywords/peptide","display_name":"Peptide","score":0.6767066717147827},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.5773168802261353},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.5248320698738098},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5163718461990356},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.4301120638847351},{"id":"https://openalex.org/keywords/binding-site","display_name":"Binding site","score":0.42658355832099915},{"id":"https://openalex.org/keywords/drug-development","display_name":"Drug development","score":0.42074185609817505},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.4085843861103058},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.34586048126220703},{"id":"https://openalex.org/keywords/stereochemistry","display_name":"Stereochemistry","score":0.29256173968315125},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.25901156663894653},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2528246343135834},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22034457325935364},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.09695735573768616}],"concepts":[{"id":"https://openalex.org/C56173144","wikidata":"https://www.wikidata.org/wiki/Q1539893","display_name":"Pharmacophore","level":2,"score":0.8578988313674927},{"id":"https://openalex.org/C2780152424","wikidata":"https://www.wikidata.org/wiki/Q4826062","display_name":"AutoDock","level":4,"score":0.6905733346939087},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.6767066717147827},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.5773168802261353},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.5248320698738098},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5163718461990356},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.4301120638847351},{"id":"https://openalex.org/C107824862","wikidata":"https://www.wikidata.org/wiki/Q616005","display_name":"Binding site","level":2,"score":0.42658355832099915},{"id":"https://openalex.org/C64903051","wikidata":"https://www.wikidata.org/wiki/Q2198549","display_name":"Drug development","level":3,"score":0.42074185609817505},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.4085843861103058},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.34586048126220703},{"id":"https://openalex.org/C71240020","wikidata":"https://www.wikidata.org/wiki/Q186011","display_name":"Stereochemistry","level":1,"score":0.29256173968315125},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.25901156663894653},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2528246343135834},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22034457325935364},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.09695735573768616},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013329","descriptor_name":"Structure-Activity Relationship","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018716","descriptor_name":"Molecular Mimicry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018716","descriptor_name":"Molecular Mimicry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018716","descriptor_name":"Molecular Mimicry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019151","descriptor_name":"Peptide Library","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019151","descriptor_name":"Peptide Library","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019151","descriptor_name":"Peptide Library","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1021/ci800174c","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci800174c","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:18826301","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18826301","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320847","display_name":"Science Foundation Ireland","ror":"https://ror.org/0271asj38"},{"id":"https://openalex.org/F4320321056","display_name":"Irish Research Council","ror":"https://ror.org/051xex213"},{"id":"https://openalex.org/F4320332163","display_name":"U.S. Food and Drug Administration","ror":"https://ror.org/034xvzb47"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1975409477","https://openalex.org/W1987200512","https://openalex.org/W1997424673","https://openalex.org/W1998492578","https://openalex.org/W2031295191","https://openalex.org/W2036791251","https://openalex.org/W2040335095","https://openalex.org/W2041449172","https://openalex.org/W2052033556","https://openalex.org/W2052256295","https://openalex.org/W2052420006","https://openalex.org/W2061357909","https://openalex.org/W2081912151","https://openalex.org/W2097933346","https://openalex.org/W2136280642","https://openalex.org/W2140268969","https://openalex.org/W2158534713","https://openalex.org/W2168514491"],"related_works":["https://openalex.org/W2058674645","https://openalex.org/W2766845742","https://openalex.org/W1594539819","https://openalex.org/W2007257620","https://openalex.org/W2130867670","https://openalex.org/W4213038553","https://openalex.org/W1984029386","https://openalex.org/W4312202637","https://openalex.org/W2136513242","https://openalex.org/W2336040088"],"abstract_inverted_index":{"Most":[0],"biological":[1],"functions":[2],"are":[3],"regulated":[4],"through":[5],"complex":[6],"networks":[7],"of":[8,30,49,56,73,104,111,118,130,151,172,181],"transient":[9],"protein":[10],"interactions,":[11],"and,":[12],"thus,":[13],"finding":[14],"effective":[15],"ways":[16],"to":[17,38,85,125,143],"modulate":[18],"them":[19],"would":[20],"represent":[21,45,186],"an":[22],"important":[23],"step":[24],"towards":[25],"defining":[26],"the":[27,102,109,126,144,152,173,179,201],"next":[28],"generation":[29],"drugs.":[31],"In":[32],"this":[33],"study,":[34],"we":[35],"set":[36],"out":[37],"determine":[39],"if":[40],"existing":[41],"approved":[42,183],"drugs":[43,84,184],"may":[44,64,185,198],"a":[46,94,116,156,187,196],"good":[47],"source":[48],"compounds":[50,206],"from":[51,200],"which":[52],"initial":[53],"lead":[54],"inhibitors":[55],"protein-protein":[57,193],"interactions":[58],"mediated":[59],"by":[60],"short":[61],"peptide":[62],"regions":[63],"be":[65],"drawn.":[66],"Peptide":[67],"structures":[68],"were":[69,141],"defined":[70],"in":[71,190,214],"terms":[72],"pharmacophores":[74,106],"and":[75,80,107,211],"searched":[76],"against":[77],"U.S.":[78],"Food":[79],"Drug":[81],"Administration":[82],"(FDA)-approved":[83],"identify":[86],"similar":[87],"compounds.":[88],"The":[89,136,149],"top":[90,137],"ranking":[91,138],"matches":[92,140,154],"(using":[93],"score":[95],"that":[96,122,164,171,178,204],"corrects":[97],"root-mean-square":[98],"deviation":[99],"(rmsd)":[100],"for":[101,108],"number":[103,110,117],"matched":[105,123],"drug":[112,139],"rotatable":[113],"bonds)":[114],"included":[115],"nuclear":[119],"receptor":[120,133],"ligands":[121],"allosterically":[124],"corepressor":[127],"binding":[128,163],"site":[129,146],"peroxisome":[131],"proliferator-activated":[132],"alpha":[134],"(PPARalpha).":[135],"docked":[142],"peptide-binding":[145],"using":[147],"AUTODOCK.":[148],"majority":[150],"top-ranking":[153],"showed":[155],"negative":[157],"estimated":[158],"free":[159],"energy":[160],"change":[161],"upon":[162],"is":[165],"comparable":[166],"to,":[167],"or":[168],"greater":[169],"than,":[170],"original":[174],"peptide.":[175],"We":[176],"conclude":[177],"usage":[180],"certain":[182],"useful":[188],"strategy":[189,197],"inhibiting":[191],"specific":[192],"interactions.":[194],"Such":[195],"benefit":[199],"increased":[202],"likelihood":[203],"developed":[205],"might":[207],"have":[208],"favorable":[209],"bioactivity":[210],"safety":[212],"profiles":[213],"clinical":[215],"use.":[216]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
