{"id":"https://openalex.org/W2094926963","doi":"https://doi.org/10.1021/ci4005783","title":"Substrate Sequences Tell Similar Stories as Binding Cavities: Commentary","display_name":"Substrate Sequences Tell Similar Stories as Binding Cavities: Commentary","publication_year":2013,"publication_date":"2013-10-28","ids":{"openalex":"https://openalex.org/W2094926963","doi":"https://doi.org/10.1021/ci4005783","mag":"2094926963","pmid":"https://pubmed.ncbi.nlm.nih.gov/24359119"},"language":"en","primary_location":{"id":"doi:10.1021/ci4005783","is_oa":true,"landing_page_url":"https://doi.org/10.1021/ci4005783","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/ci4005783","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"publisher-specific-oa","license_id":"https://openalex.org/licenses/publisher-specific-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"letter","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://pubs.acs.org/doi/pdf/10.1021/ci4005783","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077192381","display_name":"Julian E. Fuchs","orcid":"https://orcid.org/0000-0003-4322-9481"},"institutions":[{"id":"https://openalex.org/I190249584","display_name":"Universit\u00e4t Innsbruck","ror":"https://ror.org/054pv6659","country_code":"AT","type":"education","lineage":["https://openalex.org/I190249584"]}],"countries":["AT"],"is_corresponding":true,"raw_author_name":"Julian E. Fuchs","raw_affiliation_strings":["Institute\rof General, Inorganic\rand Theoretical Chemistry, and Center for Molecular Biosciences Innsbruck\r(CMBI), University of Innsbruck, Innrain 80/82, A-6020 Innsbruck, Austria"],"affiliations":[{"raw_affiliation_string":"Institute\rof General, Inorganic\rand Theoretical Chemistry, and Center for Molecular Biosciences Innsbruck\r(CMBI), University of Innsbruck, Innrain 80/82, A-6020 Innsbruck, Austria","institution_ids":["https://openalex.org/I190249584"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5028405436","display_name":"Klaus R. Liedl","orcid":"https://orcid.org/0000-0002-0985-2299"},"institutions":[{"id":"https://openalex.org/I190249584","display_name":"Universit\u00e4t Innsbruck","ror":"https://ror.org/054pv6659","country_code":"AT","type":"education","lineage":["https://openalex.org/I190249584"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Klaus R. Liedl","raw_affiliation_strings":["Institute\rof General, Inorganic\rand Theoretical Chemistry, and Center for Molecular Biosciences Innsbruck\r(CMBI), University of Innsbruck, Innrain 80/82, A-6020 Innsbruck, Austria","Institute#R#of General, Inorganic#R#and Theoretical Chemistry, and Center for Molecular Biosciences Innsbruck#R#(CMBI), University of Innsbruck, Innrain 80/82, A-6020 Innsbruck, Austria"],"affiliations":[{"raw_affiliation_string":"Institute\rof General, Inorganic\rand Theoretical Chemistry, and Center for Molecular Biosciences Innsbruck\r(CMBI), University of Innsbruck, Innrain 80/82, A-6020 Innsbruck, Austria","institution_ids":["https://openalex.org/I190249584"]},{"raw_affiliation_string":"Institute#R#of General, Inorganic#R#and Theoretical Chemistry, and Center for Molecular Biosciences Innsbruck#R#(CMBI), University of Innsbruck, Innrain 80/82, A-6020 Innsbruck, Austria","institution_ids":["https://openalex.org/I190249584"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5077192381"],"corresponding_institution_ids":["https://openalex.org/I190249584"],"apc_list":null,"apc_paid":{"value":1981,"currency":"EUR","value_usd":2136},"fwci":0.4808,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.71074251,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"53","issue":"12","first_page":"3115","last_page":"3116"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10913","display_name":"Molecular Junctions and Nanostructures","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10913","display_name":"Molecular Junctions and Nanostructures","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.991599977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/citation","display_name":"Citation","score":0.6858732104301453},{"id":"https://openalex.org/keywords/social-media","display_name":"Social media","score":0.5126249194145203},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.47165384888648987},{"id":"https://openalex.org/keywords/altmetrics","display_name":"Altmetrics","score":0.46410784125328064},{"id":"https://openalex.org/keywords/icon","display_name":"Icon","score":0.45056548714637756},{"id":"https://openalex.org/keywords/library-science","display_name":"Library science","score":0.43716636300086975},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.418532133102417},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3957928717136383}],"concepts":[{"id":"https://openalex.org/C2778805511","wikidata":"https://www.wikidata.org/wiki/Q1713","display_name":"Citation","level":2,"score":0.6858732104301453},{"id":"https://openalex.org/C518677369","wikidata":"https://www.wikidata.org/wiki/Q202833","display_name":"Social media","level":2,"score":0.5126249194145203},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47165384888648987},{"id":"https://openalex.org/C2778407487","wikidata":"https://www.wikidata.org/wiki/Q14565201","display_name":"Altmetrics","level":2,"score":0.46410784125328064},{"id":"https://openalex.org/C2778447006","wikidata":"https://www.wikidata.org/wiki/Q1156474","display_name":"Icon","level":2,"score":0.45056548714637756},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.43716636300086975},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.418532133102417},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3957928717136383},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010447","descriptor_name":"Peptide Hydrolases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010447","descriptor_name":"Peptide Hydrolases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010447","descriptor_name":"Peptide Hydrolases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010447","descriptor_name":"Peptide Hydrolases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010447","descriptor_name":"Peptide Hydrolases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010447","descriptor_name":"Peptide Hydrolases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1021/ci4005783","is_oa":true,"landing_page_url":"https://doi.org/10.1021/ci4005783","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/ci4005783","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"publisher-specific-oa","license_id":"https://openalex.org/licenses/publisher-specific-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:24359119","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24359119","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:europepmc.org:2854836","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3871284","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1021/ci4005783","is_oa":true,"landing_page_url":"https://doi.org/10.1021/ci4005783","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/ci4005783","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"publisher-specific-oa","license_id":"https://openalex.org/licenses/publisher-specific-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2094926963.pdf","grobid_xml":"https://content.openalex.org/works/W2094926963.grobid-xml"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W1544009106","https://openalex.org/W1968178167","https://openalex.org/W1978611499","https://openalex.org/W1978787457","https://openalex.org/W2009393104","https://openalex.org/W2041877620","https://openalex.org/W2058647425","https://openalex.org/W2070789802","https://openalex.org/W2096541451","https://openalex.org/W2146940292","https://openalex.org/W2153341679","https://openalex.org/W2156289248","https://openalex.org/W2162011385"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2618017038","https://openalex.org/W3175319091","https://openalex.org/W2166317738","https://openalex.org/W2073023209","https://openalex.org/W2808646405","https://openalex.org/W3150373829","https://openalex.org/W1990918794","https://openalex.org/W2795304587","https://openalex.org/W4384945517"],"abstract_inverted_index":{"ADVERTISEMENT":[0],"RETURN":[1],"TO":[2],"ISSUEEditorialNEXTSubstrate":[3],"Sequences":[4],"Tell":[5],"Similar":[6],"Stories":[7],"as":[8],"Binding":[9],"Cavities:":[10],"CommentaryJulian":[11],"E.":[12],"Fuchs":[13],"and":[14,24,27,93,98,127,171,188,204,206,217],"Klaus":[15],"R.":[16],"Liedl*View":[17],"Author":[18],"Information":[19],"Institute":[20],"of":[21,35,83,118,144],"General,":[22],"Inorganic":[23],"Theoretical":[25],"Chemistry,":[26],"Center":[28],"for":[29,176],"Molecular":[30],"Biosciences":[31],"Innsbruck":[32],"(CMBI),":[33],"University":[34],"Innsbruck,":[36,40],"Innrain":[37],"80/82,":[38],"A-6020":[39],"Austria*E-mail:":[41],"[email":[42],"protected]Cite":[43],"this:":[44],"J.":[45],"Chem.":[46],"Inf.":[47],"Model.":[48],"2013,":[49],"53,":[50],"12,":[51],"3115\u20133116Publication":[52],"Date":[53],"(Web):October":[54],"28,":[55],"2013Publication":[56],"History":[57],"Published":[58],"online28":[59],"October":[60],"2013Published":[61],"inissue":[62],"23":[63],"December":[64],"2013https://doi.org/10.1021/ci4005783Copyright":[65],"\u00a9":[66],"2013":[67],"American":[68],"Chemical":[69],"SocietyRIGHTS":[70],"&":[71],"PERMISSIONSACS":[72],"AuthorChoiceArticle":[73],"Views1090Altmetric-Citations1LEARN":[74],"ABOUT":[75],"THESE":[76],"METRICSArticle":[77],"Views":[78],"are":[79,102,115],"the":[80,111,116,145,156,169,172,177,184,190],"COUNTER-compliant":[81],"sum":[82],"full":[84],"text":[85],"article":[86,150],"downloads":[87],"since":[88],"November":[89],"2008":[90],"(both":[91],"PDF":[92,212],"HTML)":[94],"across":[95],"all":[96],"institutions":[97],"individuals.":[99],"These":[100],"metrics":[101],"regularly":[103],"updated":[104,128],"to":[105,110],"reflect":[106],"usage":[107],"leading":[108],"up":[109],"last":[112],"few":[113],"days.Citations":[114],"number":[117],"other":[119],"articles":[120],"citing":[121],"this":[122],"article,":[123],"calculated":[124],"by":[125],"Crossref":[126,134],"daily.":[129],"Find":[130,180],"more":[131,181],"information":[132,182],"about":[133,168],"citation":[135],"counts.The":[136],"Altmetric":[137,185],"Attention":[138,186],"Score":[139,187],"is":[140,192],"a":[141,148,161],"quantitative":[142],"measure":[143],"attention":[146],"that":[147],"research":[149],"has":[151],"received":[152],"online.":[153],"Clicking":[154],"on":[155,183],"donut":[157],"icon":[158],"will":[159],"load":[160],"page":[162],"at":[163],"altmetric.com":[164],"with":[165,200],"additional":[166],"details":[167],"score":[170,191],"social":[173],"media":[174],"presence":[175],"given":[178],"article.":[179],"how":[189],"calculated.":[193],"Share":[194,209],"Add":[195],"toView":[196],"InAdd":[197],"Full":[198],"Text":[199],"ReferenceAdd":[201],"Description":[202],"ExportRISCitationCitation":[203],"abstractCitation":[205],"referencesMore":[207],"Options":[208],"onFacebookTwitterWechatLinked":[210],"InReddit":[211],"(260":[213],"KB)":[214],"Get":[215,221],"e-AlertsSUBJECTS:Cavities,Monomers,Peptides":[216],"proteins,Screening":[218],"assays,Surface":[219],"interactions":[220],"e-Alerts":[222]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
