{"id":"https://openalex.org/W1973462822","doi":"https://doi.org/10.1021/ci2005687","title":"ProBiS-Database: Precalculated Binding Site Similarities and Local Pairwise Alignments of PDB Structures","display_name":"ProBiS-Database: Precalculated Binding Site Similarities and Local Pairwise Alignments of PDB Structures","publication_year":2012,"publication_date":"2012-01-24","ids":{"openalex":"https://openalex.org/W1973462822","doi":"https://doi.org/10.1021/ci2005687","mag":"1973462822","pmid":"https://pubmed.ncbi.nlm.nih.gov/22268964"},"language":"en","primary_location":{"id":"doi:10.1021/ci2005687","is_oa":true,"landing_page_url":"https://doi.org/10.1021/ci2005687","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1021/ci2005687","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007997462","display_name":"Janez Konc","orcid":"https://orcid.org/0000-0003-0160-3375"},"institutions":[{"id":"https://openalex.org/I4210152560","display_name":"National Institute of Chemistry","ror":"https://ror.org/050mac570","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210152560"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Janez Konc","raw_affiliation_strings":["National Institute of Chemistry, Hajdrihova\r19, 1000\rLjubljana, Slovenia","National Institute of Chemistry, Hajdrihova 19, 1000 Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova\r19, 1000\rLjubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]},{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova 19, 1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011420667","display_name":"Tomo \u010cesnik","orcid":null},"institutions":[{"id":"https://openalex.org/I4210152560","display_name":"National Institute of Chemistry","ror":"https://ror.org/050mac570","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210152560"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Tomo \u010cesnik","raw_affiliation_strings":["National Institute of Chemistry, Hajdrihova\r19, 1000\rLjubljana, Slovenia","National Institute of Chemistry, Hajdrihova#R#19, 1000#R#Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova\r19, 1000\rLjubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]},{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova#R#19, 1000#R#Ljubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028394991","display_name":"Joanna Trykowska Konc","orcid":null},"institutions":[{"id":"https://openalex.org/I4210152560","display_name":"National Institute of Chemistry","ror":"https://ror.org/050mac570","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210152560"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Joanna Trykowska Konc","raw_affiliation_strings":["National Institute of Chemistry, Hajdrihova\r19, 1000\rLjubljana, Slovenia","National Institute of Chemistry, Hajdrihova#R#19, 1000#R#Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova\r19, 1000\rLjubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]},{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova#R#19, 1000#R#Ljubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070336355","display_name":"M. Penca","orcid":null},"institutions":[{"id":"https://openalex.org/I4210152560","display_name":"National Institute of Chemistry","ror":"https://ror.org/050mac570","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210152560"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Matej Penca","raw_affiliation_strings":["National Institute of Chemistry, Hajdrihova\r19, 1000\rLjubljana, Slovenia","National Institute of Chemistry, Hajdrihova#R#19, 1000#R#Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova\r19, 1000\rLjubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]},{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova#R#19, 1000#R#Ljubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074495088","display_name":"Du\u0161anka Jane\u017ei\u010d","orcid":"https://orcid.org/0000-0003-4067-0116"},"institutions":[{"id":"https://openalex.org/I4210152560","display_name":"National Institute of Chemistry","ror":"https://ror.org/050mac570","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210152560"]}],"countries":["SI"],"is_corresponding":true,"raw_author_name":"Du\u0161anka Jane\u017ei\u010d","raw_affiliation_strings":["National Institute of Chemistry, Hajdrihova\r19, 1000\rLjubljana, Slovenia","National Institute of Chemistry, Hajdrihova#R#19, 1000#R#Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova\r19, 1000\rLjubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]},{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova#R#19, 1000#R#Ljubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5074495088"],"corresponding_institution_ids":["https://openalex.org/I4210152560"],"apc_list":null,"apc_paid":null,"fwci":2.671,"has_fulltext":false,"cited_by_count":55,"citation_normalized_percentile":{"value":0.90493446,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"52","issue":"2","first_page":"604","last_page":"612"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.9044581651687622},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank","score":0.8178818225860596},{"id":"https://openalex.org/keywords/protein-structure-database","display_name":"Protein structure database","score":0.6604923605918884},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.622722864151001},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.611818253993988},{"id":"https://openalex.org/keywords/structural-similarity","display_name":"Structural similarity","score":0.4874908924102783},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.4764542877674103},{"id":"https://openalex.org/keywords/structural-bioinformatics","display_name":"Structural bioinformatics","score":0.4527296721935272},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.45045194029808044},{"id":"https://openalex.org/keywords/structural-classification-of-proteins-database","display_name":"Structural Classification of Proteins database","score":0.45002278685569763},{"id":"https://openalex.org/keywords/structural-alignment","display_name":"Structural alignment","score":0.435703843832016},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4314730763435364},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4281523823738098},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4166158437728882},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3808545470237732},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.37593039870262146},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37102270126342773},{"id":"https://openalex.org/keywords/sequence-database","display_name":"Sequence database","score":0.290216326713562},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.2779364585876465},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2127358317375183},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.13358357548713684},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10631430149078369},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09944918751716614}],"concepts":[{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.9044581651687622},{"id":"https://openalex.org/C119145174","wikidata":"https://www.wikidata.org/wiki/Q7251429","display_name":"Protein Data Bank","level":3,"score":0.8178818225860596},{"id":"https://openalex.org/C136475424","wikidata":"https://www.wikidata.org/wiki/Q7251500","display_name":"Protein structure database","level":4,"score":0.6604923605918884},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.622722864151001},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.611818253993988},{"id":"https://openalex.org/C139489369","wikidata":"https://www.wikidata.org/wiki/Q770846","display_name":"Structural similarity","level":2,"score":0.4874908924102783},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.4764542877674103},{"id":"https://openalex.org/C69131567","wikidata":"https://www.wikidata.org/wiki/Q2068215","display_name":"Structural bioinformatics","level":3,"score":0.4527296721935272},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.45045194029808044},{"id":"https://openalex.org/C58773245","wikidata":"https://www.wikidata.org/wiki/Q4832556","display_name":"Structural Classification of Proteins database","level":3,"score":0.45002278685569763},{"id":"https://openalex.org/C4668613","wikidata":"https://www.wikidata.org/wiki/Q4116110","display_name":"Structural alignment","level":5,"score":0.435703843832016},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4314730763435364},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4281523823738098},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4166158437728882},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3808545470237732},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.37593039870262146},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37102270126342773},{"id":"https://openalex.org/C41584329","wikidata":"https://www.wikidata.org/wiki/Q175902","display_name":"Sequence database","level":3,"score":0.290216326713562},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.2779364585876465},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2127358317375183},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.13358357548713684},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10631430149078369},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09944918751716614},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1021/ci2005687","is_oa":true,"landing_page_url":"https://doi.org/10.1021/ci2005687","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:22268964","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22268964","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3287116","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3287116","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1021/ci2005687","is_oa":true,"landing_page_url":"https://doi.org/10.1021/ci2005687","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.46000000834465027,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322554","display_name":"Javna Agencija za Raziskovalno Dejavnost RS","ror":"https://ror.org/059bp8k51"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1965186869","https://openalex.org/W1971618381","https://openalex.org/W1984406447","https://openalex.org/W1993976538","https://openalex.org/W2001291669","https://openalex.org/W2015147525","https://openalex.org/W2021068722","https://openalex.org/W2051783184","https://openalex.org/W2051895548","https://openalex.org/W2076398318","https://openalex.org/W2085277871","https://openalex.org/W2094519647","https://openalex.org/W2106449850","https://openalex.org/W2108302275","https://openalex.org/W2122976061","https://openalex.org/W2125200271","https://openalex.org/W2130479394","https://openalex.org/W2131523466","https://openalex.org/W2138770756","https://openalex.org/W2151889113","https://openalex.org/W2157005437","https://openalex.org/W2183091601","https://openalex.org/W2312513464","https://openalex.org/W4210323379"],"related_works":["https://openalex.org/W2084743099","https://openalex.org/W2131204071","https://openalex.org/W2141388583","https://openalex.org/W1989756167","https://openalex.org/W2118652015","https://openalex.org/W2089085945","https://openalex.org/W1973462822","https://openalex.org/W2047036156","https://openalex.org/W1988384104","https://openalex.org/W2613371097"],"abstract_inverted_index":{"ProBiS-Database":[0,78,116],"is":[1,31,61,117,121],"a":[2,50,84,98],"searchable":[3],"repository":[4],"of":[5,23,28,70,105,108],"precalculated":[6],"local":[7,112],"structural":[8,34,113],"alignments":[9],"in":[10,17,92],"proteins":[11,91],"detected":[12],"by":[13,33],"the":[14,18,29,39,58,68,93],"ProBiS":[15],"algorithm":[16],"Protein":[19],"Data":[20],"Bank.":[21],"Identification":[22],"functionally":[24],"important":[25],"binding":[26],"regions":[27],"protein":[30,41,52,76,86],"facilitated":[32],"similarity":[35],"scores":[36],"mapped":[37],"to":[38,64],"query":[40,51,85],"structure.":[42],"PDB":[43],"structures":[44],"that":[45],"have":[46],"been":[47],"aligned":[48],"with":[49,74],"may":[53],"be":[54],"rapidly":[55],"retrieved":[56],"from":[57],"ProBiS-Database,":[59],"which":[60],"thus":[62],"able":[63],"generate":[65],"hypotheses":[66],"concerning":[67],"roles":[69],"uncharacterized":[71,75],"proteins.":[72],"Presented":[73],"structure,":[77],"can":[79],"discern":[80],"relationships":[81],"between":[82],"such":[83],"and":[87,97,120],"other":[88],"better":[89],"known":[90],"PDB.":[94],"Fast":[95],"access":[96],"user-friendly":[99],"graphical":[100],"interface":[101],"promote":[102],"easy":[103],"exploration":[104],"this":[106],"database":[107],"over":[109],"420":[110],"million":[111],"alignments.":[114],"The":[115],"updated":[118],"weekly":[119],"freely":[122],"available":[123],"online":[124],"at":[125],"http://probis.cmm.ki.si/database.":[126]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":5}],"updated_date":"2026-06-23T06:36:01.041984","created_date":"2025-10-10T00:00:00"}