{"id":"https://openalex.org/W2023706620","doi":"https://doi.org/10.1021/ci2003297","title":"DEGAS: Sharing and Tracking Target Compound Ideas with External Collaborators","display_name":"DEGAS: Sharing and Tracking Target Compound Ideas with External Collaborators","publication_year":2011,"publication_date":"2011-11-12","ids":{"openalex":"https://openalex.org/W2023706620","doi":"https://doi.org/10.1021/ci2003297","mag":"2023706620","pmid":"https://pubmed.ncbi.nlm.nih.gov/22080614"},"language":"en","primary_location":{"id":"doi:10.1021/ci2003297","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci2003297","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044000859","display_name":"Man\u2010Ling Lee","orcid":"https://orcid.org/0000-0002-1107-7818"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Man-Ling Lee","raw_affiliation_strings":["Genentech Inc., South San Francisco, California 94080, United States","Genentech, Inc, South San Francisco, California 94080, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genentech Inc., South San Francisco, California 94080, United States","institution_ids":[]},{"raw_affiliation_string":"Genentech, Inc, South San Francisco, California 94080, United States","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012399704","display_name":"Ignacio Aliagas","orcid":"https://orcid.org/0000-0003-2756-2057"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ignacio Aliagas","raw_affiliation_strings":["Genentech Inc., South San Francisco, California 94080, United States","Genentech, Inc, South San Francisco, California 94080, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genentech Inc., South San Francisco, California 94080, United States","institution_ids":[]},{"raw_affiliation_string":"Genentech, Inc, South San Francisco, California 94080, United States","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002686978","display_name":"Jennafer Dotson","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jennafer Dotson","raw_affiliation_strings":["Genentech Inc., South San Francisco, California 94080, United States","Genentech, Inc, South San Francisco, California 94080, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genentech Inc., South San Francisco, California 94080, United States","institution_ids":[]},{"raw_affiliation_string":"Genentech, Inc, South San Francisco, California 94080, United States","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014679061","display_name":"Jianwen A. Feng","orcid":"https://orcid.org/0000-0003-1221-7605"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jianwen A. Feng","raw_affiliation_strings":["Genentech Inc., South San Francisco, California 94080, United States","Genentech, Inc, South San Francisco, California 94080, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genentech Inc., South San Francisco, California 94080, United States","institution_ids":[]},{"raw_affiliation_string":"Genentech, Inc, South San Francisco, California 94080, United States","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022225535","display_name":"Alberto Gobbi","orcid":"https://orcid.org/0000-0003-0434-9237"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alberto Gobbi","raw_affiliation_strings":["Genentech Inc., South San Francisco, California 94080, United States","Genentech, Inc, South San Francisco, California 94080, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genentech Inc., South San Francisco, California 94080, United States","institution_ids":[]},{"raw_affiliation_string":"Genentech, Inc, South San Francisco, California 94080, United States","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016302478","display_name":"Timothy P. Heffron","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Timothy Heffron","raw_affiliation_strings":["Genentech Inc., South San Francisco, California 94080, United States","Genentech, Inc, South San Francisco, California 94080, United States"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genentech Inc., South San Francisco, California 94080, United States","institution_ids":[]},{"raw_affiliation_string":"Genentech, Inc, South San Francisco, California 94080, United States","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5044000859"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.9571,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.85575691,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"52","issue":"2","first_page":"278","last_page":"284"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9659000039100647,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9387999773025513,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6545001864433289},{"id":"https://openalex.org/keywords/order","display_name":"Order (exchange)","score":0.5507069230079651},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.5247607231140137},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.4535655677318573},{"id":"https://openalex.org/keywords/risk-analysis","display_name":"Risk analysis (engineering)","score":0.44449105858802795},{"id":"https://openalex.org/keywords/usability","display_name":"Usability","score":0.4170428514480591},{"id":"https://openalex.org/keywords/process-management","display_name":"Process management","score":0.3737325072288513},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.32747167348861694},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.20747992396354675},{"id":"https://openalex.org/keywords/business","display_name":"Business","score":0.18110275268554688},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.14015927910804749},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.09865838289260864}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6545001864433289},{"id":"https://openalex.org/C182306322","wikidata":"https://www.wikidata.org/wiki/Q1779371","display_name":"Order (exchange)","level":2,"score":0.5507069230079651},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.5247607231140137},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.4535655677318573},{"id":"https://openalex.org/C112930515","wikidata":"https://www.wikidata.org/wiki/Q4389547","display_name":"Risk analysis (engineering)","level":1,"score":0.44449105858802795},{"id":"https://openalex.org/C170130773","wikidata":"https://www.wikidata.org/wiki/Q216378","display_name":"Usability","level":2,"score":0.4170428514480591},{"id":"https://openalex.org/C195094911","wikidata":"https://www.wikidata.org/wiki/Q14167904","display_name":"Process management","level":1,"score":0.3737325072288513},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.32747167348861694},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.20747992396354675},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.18110275268554688},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.14015927910804749},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.09865838289260864},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C10138342","wikidata":"https://www.wikidata.org/wiki/Q43015","display_name":"Finance","level":1,"score":0.0},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003299","descriptor_name":"Cooperative Behavior","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003299","descriptor_name":"Cooperative Behavior","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003299","descriptor_name":"Cooperative Behavior","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1021/ci2003297","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci2003297","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:22080614","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22080614","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332193","display_name":"Genentech","ror":"https://ror.org/04gndp242"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":14,"referenced_works":["https://openalex.org/W1964020454","https://openalex.org/W1972770757","https://openalex.org/W1981798546","https://openalex.org/W1984571117","https://openalex.org/W1995239131","https://openalex.org/W2006027568","https://openalex.org/W2016575780","https://openalex.org/W2033495141","https://openalex.org/W2040261924","https://openalex.org/W2076914170","https://openalex.org/W2088221622","https://openalex.org/W2107184926","https://openalex.org/W2132075463","https://openalex.org/W2212634197"],"related_works":["https://openalex.org/W4389670110","https://openalex.org/W2429057255","https://openalex.org/W2187546663","https://openalex.org/W148745890","https://openalex.org/W2611942503","https://openalex.org/W4315621326","https://openalex.org/W2899790217","https://openalex.org/W2598865957","https://openalex.org/W1576092969","https://openalex.org/W2524154428"],"abstract_inverted_index":{"To":[0,40],"minimize":[1,135],"the":[2,42,70,80,107,136],"risk":[3],"of":[4,126,138],"failure":[5],"in":[6,132],"clinical":[7,17],"trials,":[8],"drug":[9,29],"discovery":[10,30],"teams":[11,35],"must":[12],"propose":[13],"active":[14],"and":[15,62,86,96,140],"selective":[16],"candidates":[18],"with":[19],"good":[20],"physicochemical":[21],"properties.":[22],"An":[23],"additional":[24],"challenge":[25],"is":[26,31],"that":[27,78,87],"today":[28],"often":[32],"conducted":[33],"by":[34],"at":[36],"different":[37],"geographical":[38],"locations.":[39],"improve":[41],"collaborative":[43],"decision":[44],"making":[45],"on":[46],"which":[47,57],"compounds":[48,83],"to":[49,67,76,105,109,134],"synthesize,":[50],"we":[51],"have":[52],"implemented":[53,75],"DEGAS,":[54,124],"an":[55],"application":[56],"enables":[58],"scientists":[59],"from":[60,63],"Genentech":[61],"collaborating":[64],"external":[65],"partners":[66],"instantly":[68],"access":[69],"same":[71],"data.":[72],"DEGAS":[73],"was":[74,128],"ensure":[77],"only":[79],"best":[81],"target":[82],"are":[84,89,100],"made":[85,90],"they":[88],"without":[91],"duplicate":[92],"effort.":[93],"Physicochemical":[94],"properties":[95],"DMPK":[97],"model":[98],"predictions":[99],"computed":[101],"for":[102],"each":[103],"compound":[104],"allow":[106],"team":[108],"make":[110],"informed":[111],"decisions":[112],"when":[113],"prioritizing.":[114],"The":[115],"synthesis":[116],"progress":[117],"can":[118],"be":[119],"easily":[120],"tracked.":[121],"While":[122],"developing":[123],"ease":[125],"use":[127],"a":[129],"particular":[130],"goal":[131],"order":[133],"difficulty":[137],"training":[139],"supporting":[141],"remote":[142],"users.":[143]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}