{"id":"https://openalex.org/W2052828380","doi":"https://doi.org/10.1021/ci050177i","title":"Mathematical Modeling of the Myosin Light Chain Kinase Activation","display_name":"Mathematical Modeling of the Myosin Light Chain Kinase Activation","publication_year":2005,"publication_date":"2005-10-15","ids":{"openalex":"https://openalex.org/W2052828380","doi":"https://doi.org/10.1021/ci050177i","mag":"2052828380","pmid":"https://pubmed.ncbi.nlm.nih.gov/16309261"},"language":"en","primary_location":{"id":"doi:10.1021/ci050177i","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci050177i","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5064887279","display_name":"Ale\u0161 Fajmut","orcid":"https://orcid.org/0000-0003-4418-983X"},"institutions":[{"id":"https://openalex.org/I37696226","display_name":"University of Maribor","ror":"https://ror.org/01d5jce07","country_code":"SI","type":"education","lineage":["https://openalex.org/I37696226"]}],"countries":["SI"],"is_corresponding":true,"raw_author_name":"Ale\u0161 Fajmut","raw_affiliation_strings":["Department of Physics, University of Maribor, Koro\u0161ka cesta 160, SI-2000 Maribor, Slovenia, and Josef Stefan Institute, Jamova 39, SI-1000 Ljubljana, Slovenia"],"affiliations":[{"raw_affiliation_string":"Department of Physics, University of Maribor, Koro\u0161ka cesta 160, SI-2000 Maribor, Slovenia, and Josef Stefan Institute, Jamova 39, SI-1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I37696226"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018940029","display_name":"Marko Jagodi\u010d","orcid":"https://orcid.org/0000-0001-6314-6785"},"institutions":[{"id":"https://openalex.org/I37696226","display_name":"University of Maribor","ror":"https://ror.org/01d5jce07","country_code":"SI","type":"education","lineage":["https://openalex.org/I37696226"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Marko Jagodi\u010d","raw_affiliation_strings":["Department of Physics, University of Maribor, Koro\u0161ka cesta 160, SI-2000 Maribor, Slovenia, and Josef Stefan Institute, Jamova 39, SI-1000 Ljubljana, Slovenia"],"affiliations":[{"raw_affiliation_string":"Department of Physics, University of Maribor, Koro\u0161ka cesta 160, SI-2000 Maribor, Slovenia, and Josef Stefan Institute, Jamova 39, SI-1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I37696226"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070734938","display_name":"Milan Brumen","orcid":null},"institutions":[{"id":"https://openalex.org/I37696226","display_name":"University of Maribor","ror":"https://ror.org/01d5jce07","country_code":"SI","type":"education","lineage":["https://openalex.org/I37696226"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Milan Brumen","raw_affiliation_strings":["Department of Physics, University of Maribor, Koro\u0161ka cesta 160, SI-2000 Maribor, Slovenia, and Josef Stefan Institute, Jamova 39, SI-1000 Ljubljana, Slovenia"],"affiliations":[{"raw_affiliation_string":"Department of Physics, University of Maribor, Koro\u0161ka cesta 160, SI-2000 Maribor, Slovenia, and Josef Stefan Institute, Jamova 39, SI-1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I37696226"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5064887279"],"corresponding_institution_ids":["https://openalex.org/I37696226"],"apc_list":null,"apc_paid":null,"fwci":0.66117839,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.64050889,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"45","issue":"6","first_page":"1605","last_page":"1609"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10169","display_name":"Protein Kinase Regulation and GTPase Signaling","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10169","display_name":"Protein Kinase Regulation and GTPase Signaling","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11533","display_name":"Melanoma and MAPK Pathways","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10379","display_name":"Cellular Mechanics and Interactions","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/myosin-light-chain-kinase","display_name":"Myosin light-chain kinase","score":0.9234296083450317},{"id":"https://openalex.org/keywords/calmodulin","display_name":"Calmodulin","score":0.7686064839363098},{"id":"https://openalex.org/keywords/myosin","display_name":"Myosin","score":0.5959528088569641},{"id":"https://openalex.org/keywords/chain","display_name":"Chain (unit)","score":0.5516076683998108},{"id":"https://openalex.org/keywords/immunoglobulin-light-chain","display_name":"Immunoglobulin light chain","score":0.4642900228500366},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.4349313974380493},{"id":"https://openalex.org/keywords/biophysics","display_name":"Biophysics","score":0.40737760066986084},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.37485796213150024},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.3039442300796509},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.2821232080459595},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2032783031463623},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.19784477353096008}],"concepts":[{"id":"https://openalex.org/C8035138","wikidata":"https://www.wikidata.org/wiki/Q6017854","display_name":"Myosin light-chain kinase","level":3,"score":0.9234296083450317},{"id":"https://openalex.org/C29688787","wikidata":"https://www.wikidata.org/wiki/Q409145","display_name":"Calmodulin","level":3,"score":0.7686064839363098},{"id":"https://openalex.org/C6997183","wikidata":"https://www.wikidata.org/wiki/Q271727","display_name":"Myosin","level":2,"score":0.5959528088569641},{"id":"https://openalex.org/C199185054","wikidata":"https://www.wikidata.org/wiki/Q552299","display_name":"Chain (unit)","level":2,"score":0.5516076683998108},{"id":"https://openalex.org/C36394416","wikidata":"https://www.wikidata.org/wiki/Q949267","display_name":"Immunoglobulin light chain","level":3,"score":0.4642900228500366},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.4349313974380493},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.40737760066986084},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.37485796213150024},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.3039442300796509},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.2821232080459595},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2032783031463623},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.19784477353096008},{"id":"https://openalex.org/C1276947","wikidata":"https://www.wikidata.org/wiki/Q333","display_name":"Astronomy","level":1,"score":0.0},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.0},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002118","descriptor_name":"Calcium","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004789","descriptor_name":"Enzyme Activation","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D031541","descriptor_name":"Fluorescence Resonance Energy Transfer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009130","descriptor_name":"Muscle, Smooth","qualifier_ui":"Q000201","qualifier_name":"enzymology","is_major_topic":false},{"descriptor_ui":"D009219","descriptor_name":"Myosin-Light-Chain Kinase","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002118","descriptor_name":"Calcium","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004789","descriptor_name":"Enzyme Activation","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D031541","descriptor_name":"Fluorescence Resonance Energy Transfer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009130","descriptor_name":"Muscle, Smooth","qualifier_ui":"Q000201","qualifier_name":"enzymology","is_major_topic":false},{"descriptor_ui":"D009219","descriptor_name":"Myosin-Light-Chain Kinase","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002118","descriptor_name":"Calcium","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D002147","descriptor_name":"Calmodulin","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004789","descriptor_name":"Enzyme Activation","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D031541","descriptor_name":"Fluorescence Resonance Energy Transfer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009130","descriptor_name":"Muscle, Smooth","qualifier_ui":"Q000201","qualifier_name":"enzymology","is_major_topic":false},{"descriptor_ui":"D009219","descriptor_name":"Myosin-Light-Chain Kinase","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1021/ci050177i","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci050177i","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:16309261","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16309261","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W122438358","https://openalex.org/W1484198052","https://openalex.org/W1509770379","https://openalex.org/W1536723145","https://openalex.org/W1965849568","https://openalex.org/W1966813371","https://openalex.org/W1982252438","https://openalex.org/W1992332602","https://openalex.org/W2004019334","https://openalex.org/W2014574682","https://openalex.org/W2014956239","https://openalex.org/W2024357251","https://openalex.org/W2064695370","https://openalex.org/W2067394407","https://openalex.org/W2080631697","https://openalex.org/W2097813999","https://openalex.org/W2099442298","https://openalex.org/W2101998405","https://openalex.org/W2118901204","https://openalex.org/W2145453194","https://openalex.org/W2263556977"],"related_works":["https://openalex.org/W2020285675","https://openalex.org/W2075691686","https://openalex.org/W2014714209","https://openalex.org/W2021631069","https://openalex.org/W2094193955","https://openalex.org/W1996981536","https://openalex.org/W2048289429","https://openalex.org/W4237501314","https://openalex.org/W1990272553","https://openalex.org/W1546918094"],"abstract_inverted_index":{"The":[0,72],"mathematical":[1],"model":[2,73],"presented":[3],"here":[4],"describes":[5],"the":[6,48,59,68,90],"interactions":[7],"among":[8],"Ca2+,":[9],"calmodulin":[10],"(CaM),":[11],"and":[12,18,80],"myosin":[13],"light":[14],"chain":[15],"kinase":[16],"(MLCK)":[17],"consists":[19],"of":[20,30,39,50,56,83,92],"a":[21,37,54],"kinetic":[22],"scheme":[23],"taking":[24],"into":[25],"account":[26],"7":[27],"reactions":[28],"instead":[29],"12":[31],"as":[32,53,86,88],"proposed":[33,95],"previously.":[34],"We":[35],"derive":[36],"system":[38],"5":[40],"nonlinear":[41],"ordinary":[42],"differential":[43],"equations.":[44],"Solving":[45],"it":[46],"yields":[47],"prediction":[49],"active":[51,60,84],"MLCK":[52,61,85],"function":[55],"[Ca2+]":[57],"whereby":[58],"is":[62],"defined":[63],"to":[64,67],"be":[65],"proportional":[66],"Ca4CaM.MLCK":[69],"complex":[70,96],"concentration.":[71],"predictions":[74,82],"are":[75],"compared":[76],"with":[77,89],"other":[78],"theoretical":[79],"experimental":[81],"well":[87],"results":[91],"our":[93],"previously":[94],"model.":[97]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
