{"id":"https://openalex.org/W2197669026","doi":"https://doi.org/10.1021/ci050010p","title":"Model Carbyne vs Ideal and DNA Catenanes","display_name":"Model Carbyne vs Ideal and DNA Catenanes","publication_year":2005,"publication_date":"2005-06-21","ids":{"openalex":"https://openalex.org/W2197669026","doi":"https://doi.org/10.1021/ci050010p","mag":"2197669026","pmid":"https://pubmed.ncbi.nlm.nih.gov/16045298"},"language":"en","primary_location":{"id":"doi:10.1021/ci050010p","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci050010p","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078239137","display_name":"J\u00e1n Cz. Dobrowolski","orcid":"https://orcid.org/0000-0002-7301-1590"},"institutions":[{"id":"https://openalex.org/I4210093239","display_name":"\u0141ukasiewicz Research Network - Industrial Chemistry Institute","ror":"https://ror.org/00jhf1r34","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210093239"]},{"id":"https://openalex.org/I4210101740","display_name":"Narodowy Instytut Zdrowia Publicznego PZH \u2013 Pa\u0144stwowy Instytut Badawczy","ror":"https://ror.org/015qjap30","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210101740"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Jan Cz. Dobrowolski","raw_affiliation_strings":["Industrial Chemistry Research Institute, 8, Rydygiera Street, 01-793 Warsaw, Poland, and National Institute of Public Health, 30-34, Che\u0142mska Street, 00-725 Warsaw, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Industrial Chemistry Research Institute, 8, Rydygiera Street, 01-793 Warsaw, Poland, and National Institute of Public Health, 30-34, Che\u0142mska Street, 00-725 Warsaw, Poland","institution_ids":["https://openalex.org/I4210093239","https://openalex.org/I4210101740"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5109308352","display_name":"Aleksander P. Mazurek","orcid":null},"institutions":[{"id":"https://openalex.org/I4210093239","display_name":"\u0141ukasiewicz Research Network - Industrial Chemistry Institute","ror":"https://ror.org/00jhf1r34","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210093239"]},{"id":"https://openalex.org/I4210101740","display_name":"Narodowy Instytut Zdrowia Publicznego PZH \u2013 Pa\u0144stwowy Instytut Badawczy","ror":"https://ror.org/015qjap30","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210101740"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Aleksander P. Mazurek","raw_affiliation_strings":["Industrial Chemistry Research Institute, 8, Rydygiera Street, 01-793 Warsaw, Poland, and National Institute of Public Health, 30-34, Che\u0142mska Street, 00-725 Warsaw, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Industrial Chemistry Research Institute, 8, Rydygiera Street, 01-793 Warsaw, Poland, and National Institute of Public Health, 30-34, Che\u0142mska Street, 00-725 Warsaw, Poland","institution_ids":["https://openalex.org/I4210093239","https://openalex.org/I4210101740"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.1264,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.5201573,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"45","issue":"4","first_page":"1030","last_page":"1038"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12285","display_name":"Surface Chemistry and Catalysis","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10578","display_name":"Supramolecular Chemistry and Complexes","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/catenane","display_name":"Catenane","score":0.9974392652511597},{"id":"https://openalex.org/keywords/carbyne","display_name":"Carbyne","score":0.9265223741531372},{"id":"https://openalex.org/keywords/molecule","display_name":"Molecule","score":0.4670659005641937},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.36173880100250244},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.336206316947937},{"id":"https://openalex.org/keywords/crystallography","display_name":"Crystallography","score":0.32100608944892883},{"id":"https://openalex.org/keywords/organic-chemistry","display_name":"Organic chemistry","score":0.08799979090690613}],"concepts":[{"id":"https://openalex.org/C50837382","wikidata":"https://www.wikidata.org/wiki/Q418744","display_name":"Catenane","level":3,"score":0.9974392652511597},{"id":"https://openalex.org/C2780696404","wikidata":"https://www.wikidata.org/wiki/Q2623215","display_name":"Carbyne","level":4,"score":0.9265223741531372},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.4670659005641937},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.36173880100250244},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.336206316947937},{"id":"https://openalex.org/C8010536","wikidata":"https://www.wikidata.org/wiki/Q160398","display_name":"Crystallography","level":1,"score":0.32100608944892883},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.08799979090690613},{"id":"https://openalex.org/C161790260","wikidata":"https://www.wikidata.org/wiki/Q82264","display_name":"Catalysis","level":2,"score":0.0},{"id":"https://openalex.org/C2777164566","wikidata":"https://www.wikidata.org/wiki/Q419257","display_name":"Carbene","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002219","descriptor_name":"Carbamates","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002219","descriptor_name":"Carbamates","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002219","descriptor_name":"Carbamates","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D043864","descriptor_name":"DNA, Catenated","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D043864","descriptor_name":"DNA, Catenated","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D043864","descriptor_name":"DNA, Catenated","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D043864","descriptor_name":"DNA, Catenated","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D043864","descriptor_name":"DNA, Catenated","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D043864","descriptor_name":"DNA, Catenated","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1021/ci050010p","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci050010p","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:16045298","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16045298","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320312060","display_name":"Francis Crick Institute","ror":"https://ror.org/04tnbqb63"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":90,"referenced_works":["https://openalex.org/W333541615","https://openalex.org/W1487316048","https://openalex.org/W1504533209","https://openalex.org/W1512018280","https://openalex.org/W1534719891","https://openalex.org/W1559237382","https://openalex.org/W1566760534","https://openalex.org/W1610621306","https://openalex.org/W1616784375","https://openalex.org/W1681122864","https://openalex.org/W1966144880","https://openalex.org/W1967035385","https://openalex.org/W1970774760","https://openalex.org/W1974335448","https://openalex.org/W1977688822","https://openalex.org/W1979802434","https://openalex.org/W1980000429","https://openalex.org/W1980067717","https://openalex.org/W1980773847","https://openalex.org/W1984459752","https://openalex.org/W1992909694","https://openalex.org/W1995086249","https://openalex.org/W1997273553","https://openalex.org/W1998081080","https://openalex.org/W2000815453","https://openalex.org/W2003889312","https://openalex.org/W2004805859","https://openalex.org/W2007415491","https://openalex.org/W2009011443","https://openalex.org/W2011927053","https://openalex.org/W2019873154","https://openalex.org/W2020284322","https://openalex.org/W2021032492","https://openalex.org/W2023535717","https://openalex.org/W2023811080","https://openalex.org/W2024462250","https://openalex.org/W2030153354","https://openalex.org/W2031157236","https://openalex.org/W2031224888","https://openalex.org/W2033090322","https://openalex.org/W2034943763","https://openalex.org/W2035157902","https://openalex.org/W2046340796","https://openalex.org/W2047616635","https://openalex.org/W2048797945","https://openalex.org/W2049248341","https://openalex.org/W2053715080","https://openalex.org/W2055153417","https://openalex.org/W2060122780","https://openalex.org/W2062430101","https://openalex.org/W2062687852","https://openalex.org/W2063654285","https://openalex.org/W2063791348","https://openalex.org/W2063985312","https://openalex.org/W2064318074","https://openalex.org/W2067267884","https://openalex.org/W2068960528","https://openalex.org/W2071371484","https://openalex.org/W2075786946","https://openalex.org/W2079165506","https://openalex.org/W2079967715","https://openalex.org/W2082653627","https://openalex.org/W2082938731","https://openalex.org/W2089952147","https://openalex.org/W2091325927","https://openalex.org/W2093355196","https://openalex.org/W2094012197","https://openalex.org/W2099903108","https://openalex.org/W2117565505","https://openalex.org/W2125280122","https://openalex.org/W2129901839","https://openalex.org/W2133956445","https://openalex.org/W2134346393","https://openalex.org/W2142044262","https://openalex.org/W2147866874","https://openalex.org/W2158275234","https://openalex.org/W2161239029","https://openalex.org/W2163533880","https://openalex.org/W2165210784","https://openalex.org/W2165925807","https://openalex.org/W2175937027","https://openalex.org/W2316819704","https://openalex.org/W2564474626","https://openalex.org/W2615166640","https://openalex.org/W2616798345","https://openalex.org/W3004806768","https://openalex.org/W4210579563","https://openalex.org/W4211186777","https://openalex.org/W4237702106","https://openalex.org/W4245087842"],"related_works":["https://openalex.org/W2360590967","https://openalex.org/W2396968987","https://openalex.org/W2949762718","https://openalex.org/W2949957324","https://openalex.org/W2073375419","https://openalex.org/W1999012617","https://openalex.org/W2197669026","https://openalex.org/W4388728607","https://openalex.org/W2091436431","https://openalex.org/W2083597126"],"abstract_inverted_index":{"The":[0,23,46,68,100,184],"structure":[1],"and":[2,43,59,90,115,127,180,188],"stability":[3],"of":[4,49,63,85,105,118,130,141,151,154,171,178],"two-component":[5],"carbyne":[6,24,106,142],"catenanes,":[7,14],"viewed":[8],"as":[9,121,123],"model":[10],"compounds":[11],"for":[12,137],"DNA":[13,131,182],"have":[15],"been":[16],"estimated":[17],"by":[18,40,73],"molecular":[19],"mechanics":[20],"(MM)":[21],"calculations.":[22],"catenane":[25,65,95,157],"molecules":[26,33,53],"studied":[27,54],"were":[28,71,174],"composed":[29],"from":[30,36],"interwined":[31],"cyclic":[32],"constituted":[34],"solely":[35],"carbon":[37,50],"atoms":[38,51],"bonded":[39],"alternating":[41],"single":[42],"triple":[44],"bonds.":[45],"total":[47],"number":[48,84,114],"in":[52],"was":[55,98,108,145],"set":[56],"to":[57,88,147],"60,":[58],"the":[60,64,80,83,111,124,149,152,155,161,166,169],"complementary":[61],"sizes":[62,153],"components":[66,158],"varied.":[67],"component":[69],"cycles":[70],"entangled":[72],"2,":[74],"4,":[75],"...,":[76],"11":[77],"crossings.":[78],"For":[79],"catenanes":[81,107,120],"with":[82,110,176],"crossings":[86],"equal":[87],"six":[89],"seven":[91],"more":[92],"than":[93],"one":[94],"topological":[96,139],"type":[97,140],"considered.":[99],"calculated":[101],"MM":[102,162],"strain":[103,163],"energy":[104,164],"correlated":[109,175],"averaged":[112],"crossing":[113],"length-to-diameter":[116],"ratio":[117],"ideal":[119,179],"well":[122],"electrophoretic":[125],"mobility":[126],"sedimentation":[128],"coefficient":[129],"catenanes.":[132,183],"To":[133],"observe":[134],"these":[135,172],"correlations,":[136],"each":[138],"catenane,":[143],"it":[144],"necessary":[146],"find":[148],"proportion":[150],"two":[156],"at":[159],"which":[160],"is":[165],"lowest.":[167],"Then,":[168],"values":[170],"energies":[173],"characteristics":[177],"real":[181],"fits":[185],"are":[186],"significant":[187],"nonlinear.":[189]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
