{"id":"https://openalex.org/W1970888016","doi":"https://doi.org/10.1021/ci0100898","title":"Generalized Topological Spaces in Evolutionary Theory and Combinatorial Chemistry","display_name":"Generalized Topological Spaces in Evolutionary Theory and Combinatorial Chemistry","publication_year":2002,"publication_date":"2002-01-29","ids":{"openalex":"https://openalex.org/W1970888016","doi":"https://doi.org/10.1021/ci0100898","mag":"1970888016","pmid":"https://pubmed.ncbi.nlm.nih.gov/12086517"},"language":"en","primary_location":{"id":"doi:10.1021/ci0100898","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci0100898","pdf_url":null,"source":{"id":"https://openalex.org/S171559003","display_name":"Journal of Chemical Information and Computer Sciences","issn_l":"0095-2338","issn":["0095-2338","1520-5142"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Computer Sciences","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5105653323","display_name":"B\u00e4rbel M. R. Stadler","orcid":"https://orcid.org/0000-0001-6095-4939"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"B\u00e4rbel M. R. Stadler","raw_affiliation_strings":["Institut f\u00fcr Theoretische Chemie und Molekulare Strukturbiologie Universit\u00e4t, Wien, Vienna, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut f\u00fcr Theoretische Chemie und Molekulare Strukturbiologie Universit\u00e4t, Wien, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016104736","display_name":"Peter F. Stadler","orcid":"https://orcid.org/0000-0002-5016-5191"},"institutions":[{"id":"https://openalex.org/I129774422","display_name":"University of Vienna","ror":"https://ror.org/03prydq77","country_code":"AT","type":"education","lineage":["https://openalex.org/I129774422"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Peter F. Stadler","raw_affiliation_strings":["Institut f\u00fcr Theoretische Chemie und Molekulare Strukturbiologie Universit\u00e4t, Wien, Vienna, Austria"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institut f\u00fcr Theoretische Chemie und Molekulare Strukturbiologie Universit\u00e4t, Wien, Vienna, Austria","institution_ids":["https://openalex.org/I129774422"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.4958,"has_fulltext":false,"cited_by_count":89,"citation_normalized_percentile":{"value":0.81020728,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"42","issue":"3","first_page":"577","last_page":"585"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9897000193595886,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.9883000254631042,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/formalism","display_name":"Formalism (music)","score":0.6211816668510437},{"id":"https://openalex.org/keywords/combinatorial-search","display_name":"Combinatorial search","score":0.5733187198638916},{"id":"https://openalex.org/keywords/topological-space","display_name":"Topological space","score":0.4728456139564514},{"id":"https://openalex.org/keywords/fitness-landscape","display_name":"Fitness landscape","score":0.4639461040496826},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4488607943058014},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.4380631744861603},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4232638478279114},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.39324575662612915},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3485197424888611},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.300357460975647},{"id":"https://openalex.org/keywords/pure-mathematics","display_name":"Pure mathematics","score":0.2554590106010437},{"id":"https://openalex.org/keywords/search-algorithm","display_name":"Search algorithm","score":0.24468329548835754},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.20196813344955444},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.15567055344581604},{"id":"https://openalex.org/keywords/beam-search","display_name":"Beam search","score":0.09496891498565674},{"id":"https://openalex.org/keywords/sociology","display_name":"Sociology","score":0.07230523228645325}],"concepts":[{"id":"https://openalex.org/C73301696","wikidata":"https://www.wikidata.org/wiki/Q5469984","display_name":"Formalism (music)","level":3,"score":0.6211816668510437},{"id":"https://openalex.org/C203208320","wikidata":"https://www.wikidata.org/wiki/Q5150830","display_name":"Combinatorial search","level":4,"score":0.5733187198638916},{"id":"https://openalex.org/C81332173","wikidata":"https://www.wikidata.org/wiki/Q179899","display_name":"Topological space","level":2,"score":0.4728456139564514},{"id":"https://openalex.org/C91852762","wikidata":"https://www.wikidata.org/wiki/Q3307742","display_name":"Fitness landscape","level":3,"score":0.4639461040496826},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4488607943058014},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.4380631744861603},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4232638478279114},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.39324575662612915},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3485197424888611},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.300357460975647},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.2554590106010437},{"id":"https://openalex.org/C125583679","wikidata":"https://www.wikidata.org/wiki/Q755673","display_name":"Search algorithm","level":2,"score":0.24468329548835754},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.20196813344955444},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.15567055344581604},{"id":"https://openalex.org/C19889080","wikidata":"https://www.wikidata.org/wiki/Q2835852","display_name":"Beam search","level":3,"score":0.09496891498565674},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.07230523228645325},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.0},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C558565934","wikidata":"https://www.wikidata.org/wiki/Q2743","display_name":"Musical","level":2,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005075","descriptor_name":"Biological Evolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005075","descriptor_name":"Biological Evolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005075","descriptor_name":"Biological Evolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020650","descriptor_name":"Combinatorial Chemistry Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020650","descriptor_name":"Combinatorial Chemistry Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020650","descriptor_name":"Combinatorial Chemistry Techniques","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1021/ci0100898","is_oa":false,"landing_page_url":"https://doi.org/10.1021/ci0100898","pdf_url":null,"source":{"id":"https://openalex.org/S171559003","display_name":"Journal of Chemical Information and Computer Sciences","issn_l":"0095-2338","issn":["0095-2338","1520-5142"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Computer Sciences","raw_type":"journal-article"},{"id":"pmid:12086517","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/12086517","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and computer sciences","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.15.8351","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.15.8351","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.tbi.univie.ac.at/papers/Abstracts/01-pfs-007.ps.gz","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5199999809265137,"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":55,"referenced_works":["https://openalex.org/W39760794","https://openalex.org/W70558519","https://openalex.org/W650806132","https://openalex.org/W1503170447","https://openalex.org/W1543796220","https://openalex.org/W1558320072","https://openalex.org/W1558905895","https://openalex.org/W1574322829","https://openalex.org/W1804111317","https://openalex.org/W1968961038","https://openalex.org/W1971565000","https://openalex.org/W1975654235","https://openalex.org/W1977232550","https://openalex.org/W1977940795","https://openalex.org/W1981838968","https://openalex.org/W1982940904","https://openalex.org/W1996772135","https://openalex.org/W2002899064","https://openalex.org/W2003016191","https://openalex.org/W2010664991","https://openalex.org/W2027984435","https://openalex.org/W2041694073","https://openalex.org/W2044781985","https://openalex.org/W2046585679","https://openalex.org/W2055723458","https://openalex.org/W2057540924","https://openalex.org/W2059557910","https://openalex.org/W2061158331","https://openalex.org/W2061197073","https://openalex.org/W2061384718","https://openalex.org/W2072459054","https://openalex.org/W2075121996","https://openalex.org/W2084736709","https://openalex.org/W2090484899","https://openalex.org/W2090778914","https://openalex.org/W2090927536","https://openalex.org/W2096883982","https://openalex.org/W2112864600","https://openalex.org/W2123575095","https://openalex.org/W2141327539","https://openalex.org/W2147427953","https://openalex.org/W2324108981","https://openalex.org/W2482550502","https://openalex.org/W2572756133","https://openalex.org/W2730015869","https://openalex.org/W2766040292","https://openalex.org/W2914728119","https://openalex.org/W3121418924","https://openalex.org/W3121771796","https://openalex.org/W3122583070","https://openalex.org/W3165931875","https://openalex.org/W4206502013","https://openalex.org/W4243468655","https://openalex.org/W4253153005","https://openalex.org/W4388252848"],"related_works":["https://openalex.org/W1984474632","https://openalex.org/W4322621737","https://openalex.org/W1997080762","https://openalex.org/W2018853124","https://openalex.org/W2979798330","https://openalex.org/W4385836827","https://openalex.org/W4225245892","https://openalex.org/W4242657560","https://openalex.org/W3098815132","https://openalex.org/W3098920008"],"abstract_inverted_index":{"The":[0],"search":[1,30,38,67],"spaces":[2,11],"in":[3,46],"combinatorial":[4,29,66],"chemistry":[5],"as":[6,8,19],"well":[7,44],"the":[9,28],"sequence":[10],"underlying":[12],"(molecular)":[13],"evolution":[14],"are":[15,41],"conventionally":[16],"thought":[17],"of":[18,27],"graphs.":[20],"Recombination,":[21],"however,":[22],"implies":[23],"a":[24,53],"nongraphical":[25],"structure":[26],"spaces.":[31],"These":[32],"structures,":[33],"and":[34,61,73],"their":[35],"implications":[36],"for":[37],"process":[39],"itself,":[40],"heretofore":[42],"not":[43],"understood":[45],"general.":[47],"In":[48],"this":[49],"contribution":[50],"we":[51],"review":[52],"very":[54],"general":[55],"formalism":[56],"from":[57],"point":[58],"set":[59],"topology":[60],"discuss":[62],"its":[63],"application":[64],"to":[65],"spaces,":[68],"fitness":[69],"landscapes,":[70],"evolutionary":[71],"trajectories,":[72],"artificial":[74],"chemistries.":[75]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":7},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":3}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
