{"id":"https://openalex.org/W2979528896","doi":"https://doi.org/10.1021/acs.jcim.9b00689","title":"Development of New Methods Needs Proper Evaluation\u2014Benchmarking Sets for Machine Learning Experiments for Class A GPCRs","display_name":"Development of New Methods Needs Proper Evaluation\u2014Benchmarking Sets for Machine Learning Experiments for Class A GPCRs","publication_year":2019,"publication_date":"2019-10-11","ids":{"openalex":"https://openalex.org/W2979528896","doi":"https://doi.org/10.1021/acs.jcim.9b00689","mag":"2979528896","pmid":"https://pubmed.ncbi.nlm.nih.gov/31604014"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.9b00689","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.9b00689","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://ruj.uj.edu.pl/xmlui/handle/item/155585","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022974182","display_name":"Damian Le\u015bniak","orcid":null},"institutions":[{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Damian Le\u015bniak","raw_affiliation_strings":["Faculty of Mathematics and Computer Science, Jagiellonian University, 6 \u0141ojasiewicza Street, 30-348 Krak\u00f3w, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Mathematics and Computer Science, Jagiellonian University, 6 \u0141ojasiewicza Street, 30-348 Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I126596746"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059858209","display_name":"Sabina Podlewska","orcid":"https://orcid.org/0000-0002-2891-5603"},"institutions":[{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]},{"id":"https://openalex.org/I4210120768","display_name":"Maj Institute of Pharmacology","ror":"https://ror.org/0288swk05","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210120768","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I99542240","display_name":"Polish Academy of Sciences","ror":"https://ror.org/01dr6c206","country_code":"PL","type":"government","lineage":["https://openalex.org/I99542240"]}],"countries":["PL"],"is_corresponding":true,"raw_author_name":"Sabina Podlewska","raw_affiliation_strings":["Department of Technology and Biotechnology of Drugs, Jagiellonian University Medical College, 9 Medyczna Street, 30-688 Krak\u00f3w, Poland","Maj Institute of Pharmacology, Polish Academy of Sciences, 12 Sm\u0119tna Street, 31-343 Krak\u00f3w, Poland"],"raw_orcid":"https://orcid.org/0000-0002-2891-5603","affiliations":[{"raw_affiliation_string":"Department of Technology and Biotechnology of Drugs, Jagiellonian University Medical College, 9 Medyczna Street, 30-688 Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I126596746"]},{"raw_affiliation_string":"Maj Institute of Pharmacology, Polish Academy of Sciences, 12 Sm\u0119tna Street, 31-343 Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I4210120768","https://openalex.org/I99542240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024552077","display_name":"Stanis\u0142aw Jastrz\u0229bski","orcid":"https://orcid.org/0000-0003-4138-1818"},"institutions":[{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Stanis\u0142aw Jastrz\u0119bski","raw_affiliation_strings":["Faculty of Mathematics and Computer Science, Jagiellonian University, 6 \u0141ojasiewicza Street, 30-348 Krak\u00f3w, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Mathematics and Computer Science, Jagiellonian University, 6 \u0141ojasiewicza Street, 30-348 Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I126596746"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077861707","display_name":"Igor Sieradzki","orcid":null},"institutions":[{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Igor Sieradzki","raw_affiliation_strings":["Faculty of Mathematics and Computer Science, Jagiellonian University, 6 \u0141ojasiewicza Street, 30-348 Krak\u00f3w, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Mathematics and Computer Science, Jagiellonian University, 6 \u0141ojasiewicza Street, 30-348 Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I126596746"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025399512","display_name":"Andrzej J. Bojarski","orcid":"https://orcid.org/0000-0003-1417-6333"},"institutions":[{"id":"https://openalex.org/I4210120768","display_name":"Maj Institute of Pharmacology","ror":"https://ror.org/0288swk05","country_code":"PL","type":"facility","lineage":["https://openalex.org/I4210120768","https://openalex.org/I99542240"]},{"id":"https://openalex.org/I99542240","display_name":"Polish Academy of Sciences","ror":"https://ror.org/01dr6c206","country_code":"PL","type":"government","lineage":["https://openalex.org/I99542240"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Andrzej J. Bojarski","raw_affiliation_strings":["Maj Institute of Pharmacology, Polish Academy of Sciences, 12 Sm\u0119tna Street, 31-343 Krak\u00f3w, Poland"],"raw_orcid":"https://orcid.org/0000-0003-1417-6333","affiliations":[{"raw_affiliation_string":"Maj Institute of Pharmacology, Polish Academy of Sciences, 12 Sm\u0119tna Street, 31-343 Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I4210120768","https://openalex.org/I99542240"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5052791052","display_name":"Jacek Tabor","orcid":"https://orcid.org/0000-0001-6652-7727"},"institutions":[{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]}],"countries":["PL"],"is_corresponding":false,"raw_author_name":"Jacek Tabor","raw_affiliation_strings":["Faculty of Mathematics and Computer Science, Jagiellonian University, 6 \u0141ojasiewicza Street, 30-348 Krak\u00f3w, Poland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Mathematics and Computer Science, Jagiellonian University, 6 \u0141ojasiewicza Street, 30-348 Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I126596746"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5059858209"],"corresponding_institution_ids":["https://openalex.org/I126596746","https://openalex.org/I4210120768","https://openalex.org/I99542240"],"apc_list":null,"apc_paid":null,"fwci":0.4554,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.60856324,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"59","issue":"12","first_page":"4974","last_page":"4992"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10876","display_name":"Fault Detection and Control Systems","score":0.972100019454956,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9628000259399414,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.8907343149185181},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.6616771817207336},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5857193470001221},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5063384771347046},{"id":"https://openalex.org/keywords/g-protein-coupled-receptor","display_name":"G protein-coupled receptor","score":0.5019214153289795},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.40006548166275024},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.16497302055358887},{"id":"https://openalex.org/keywords/business","display_name":"Business","score":0.05738982558250427},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.048418521881103516},{"id":"https://openalex.org/keywords/receptor","display_name":"Receptor","score":0.04791247844696045}],"concepts":[{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.8907343149185181},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.6616771817207336},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5857193470001221},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5063384771347046},{"id":"https://openalex.org/C135285700","wikidata":"https://www.wikidata.org/wiki/Q38173","display_name":"G protein-coupled receptor","level":3,"score":0.5019214153289795},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.40006548166275024},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.16497302055358887},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.05738982558250427},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.048418521881103516},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.04791247844696045},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004353","descriptor_name":"Drug Evaluation, Preclinical","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D043562","descriptor_name":"Receptors, G-Protein-Coupled","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D043562","descriptor_name":"Receptors, G-Protein-Coupled","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D043562","descriptor_name":"Receptors, G-Protein-Coupled","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1021/acs.jcim.9b00689","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.9b00689","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:31604014","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31604014","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:ruj.uj.edu.pl:item/155585","is_oa":true,"landing_page_url":"https://ruj.uj.edu.pl/xmlui/handle/item/155585","pdf_url":null,"source":{"id":"https://openalex.org/S4306401249","display_name":"Jagiellonian University Repository (Jagiellonian University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I126596746","host_organization_name":"Jagiellonian University","host_organization_lineage":["https://openalex.org/I126596746"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"pmh:oai:ruj.uj.edu.pl:item/155585","is_oa":true,"landing_page_url":"https://ruj.uj.edu.pl/xmlui/handle/item/155585","pdf_url":null,"source":{"id":"https://openalex.org/S4306401249","display_name":"Jagiellonian University Repository (Jagiellonian University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I126596746","host_organization_name":"Jagiellonian University","host_organization_lineage":["https://openalex.org/I126596746"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},"sustainable_development_goals":[{"score":0.5600000023841858,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G3677441710","display_name":null,"funder_award_id":"2018/28/C/NZ7/00145","funder_id":"https://openalex.org/F4320322511","funder_display_name":"Narodowe Centrum Nauki"}],"funders":[{"id":"https://openalex.org/F4320321042","display_name":"Fundacja na rzecz Nauki Polskiej","ror":"https://ror.org/048zd9m77"},{"id":"https://openalex.org/F4320322511","display_name":"Narodowe Centrum Nauki","ror":"https://ror.org/03ha2q922"},{"id":"https://openalex.org/F4320335332","display_name":"Instytut Farmakologii im. Jerzego Maja Polskiej Akademii Nauk","ror":"https://ror.org/0288swk05"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":61,"referenced_works":["https://openalex.org/W34343824","https://openalex.org/W807317906","https://openalex.org/W1594031697","https://openalex.org/W1964513093","https://openalex.org/W1968506227","https://openalex.org/W1972156862","https://openalex.org/W1980962873","https://openalex.org/W1984480244","https://openalex.org/W1988037271","https://openalex.org/W1991619291","https://openalex.org/W1996327711","https://openalex.org/W1998228029","https://openalex.org/W1999751841","https://openalex.org/W1999798000","https://openalex.org/W2002261888","https://openalex.org/W2004076168","https://openalex.org/W2016221381","https://openalex.org/W2016979469","https://openalex.org/W2019678805","https://openalex.org/W2021166720","https://openalex.org/W2021748110","https://openalex.org/W2034553680","https://openalex.org/W2042110087","https://openalex.org/W2044834685","https://openalex.org/W2055277208","https://openalex.org/W2056132907","https://openalex.org/W2056800045","https://openalex.org/W2058501095","https://openalex.org/W2074101150","https://openalex.org/W2083339697","https://openalex.org/W2088436166","https://openalex.org/W2088970363","https://openalex.org/W2089589794","https://openalex.org/W2096541451","https://openalex.org/W2101234009","https://openalex.org/W2107081909","https://openalex.org/W2112411768","https://openalex.org/W2119512897","https://openalex.org/W2121776789","https://openalex.org/W2134024908","https://openalex.org/W2148950790","https://openalex.org/W2152187237","https://openalex.org/W2157914995","https://openalex.org/W2166103367","https://openalex.org/W2171830166","https://openalex.org/W2177026622","https://openalex.org/W2187089797","https://openalex.org/W2198264407","https://openalex.org/W2208175234","https://openalex.org/W2244785476","https://openalex.org/W2404937024","https://openalex.org/W2557522098","https://openalex.org/W2740946158","https://openalex.org/W2771322141","https://openalex.org/W2791355014","https://openalex.org/W2803094965","https://openalex.org/W2806547269","https://openalex.org/W2911964244","https://openalex.org/W2951934944","https://openalex.org/W3104508774","https://openalex.org/W4238530616"],"related_works":["https://openalex.org/W2961085424","https://openalex.org/W4306674287","https://openalex.org/W3046775127","https://openalex.org/W3107602296","https://openalex.org/W3170094116","https://openalex.org/W4386462264","https://openalex.org/W4364306694","https://openalex.org/W4312192474","https://openalex.org/W4283697347","https://openalex.org/W4210805261"],"abstract_inverted_index":{"New":[0],"computational":[1,165],"approaches":[2,114],"for":[3,20,51,59,88,109,115,161,168,176],"virtual":[4,169],"screening":[5,170],"applications":[6],"are":[7,81,128,147,193],"constantly":[8],"being":[9,136],"developed.":[10],"However,":[11],"before":[12],"a":[13,39,57,85],"particular":[14],"tool":[15],"is":[16,96,106],"used":[17,108],"to":[18],"search":[19],"new":[21,86],"active":[22],"compounds,":[23,94],"its":[24],"effectiveness":[25],"in":[26,70,97,131,133,149],"the":[27,63,73,78,90,110,118,137,157,162,185],"type":[28],"of":[29,42,45,47,72,93,112,117,135,139,152,164,188,203],"task":[30],"must":[31],"be":[32],"examined.":[33],"In":[34],"this":[35],"study,":[36],"we":[37],"conducted":[38],"detailed":[40],"analysis":[41],"various":[43,67,113],"aspects":[44],"preparation":[46],"respective":[48],"data":[49,61,119,153,174],"sets":[50,154,175],"such":[52],"an":[53],"evaluation.":[54],"We":[55],"propose":[56],"protocol":[58],"fetching":[60],"from":[62,77],"ChEMBL":[64],"database,":[65],"examine":[66],"compound":[68],"representations":[69],"terms":[71,134],"possible":[74,140],"bias":[75],"resulting":[76],"way":[79],"they":[80],"generated,":[82],"and":[83,123],"define":[84],"metric":[87],"comparing":[89],"structural":[91],"similarity":[92],"which":[95,127],"line":[98],"with":[99,184,199],"chemical":[100],"intuition.":[101],"The":[102],"newly":[103],"developed":[104,167],"method":[105],"also":[107,129],"evaluation":[111],"division":[116],"set":[120,125],"into":[121],"training":[122],"test":[124],"parts,":[126],"examined":[130],"detail":[132],"source":[138],"results":[141,205],"bias.":[142],"Finally,":[143],"machine":[144],"learning":[145],"methods":[146,166],"applied":[148],"cross-validation":[150],"studies":[151],"constructed":[155],"within":[156],"paper,":[158],"constituting":[159],"benchmarks":[160],"assessment":[163],"tasks.":[171],"Additionally,":[172],"analogous":[173],"class":[177],"A":[178],"G":[179],"protein-coupled":[180],"receptors":[181],"(100":[182],"targets":[183],"highest":[186],"number":[187],"records)":[189],"were":[190],"prepared.":[191],"They":[192],"available":[194,206],"at":[195,207],"http://gmum.net/benchmarks/":[196],",":[197],"together":[198],"script":[200],"enabling":[201],"reproduction":[202],"all":[204],"https://github.com/lesniak43/ananas":[208],".":[209]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":5}],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2025-10-10T00:00:00"}
