{"id":"https://openalex.org/W2779144909","doi":"https://doi.org/10.1021/acs.jcim.7b00425","title":"SmilesDrawer: Parsing and Drawing SMILES-Encoded Molecular Structures Using Client-Side JavaScript","display_name":"SmilesDrawer: Parsing and Drawing SMILES-Encoded Molecular Structures Using Client-Side JavaScript","publication_year":2017,"publication_date":"2017-12-19","ids":{"openalex":"https://openalex.org/W2779144909","doi":"https://doi.org/10.1021/acs.jcim.7b00425","mag":"2779144909","pmid":"https://pubmed.ncbi.nlm.nih.gov/29257869"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.7b00425","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.7b00425","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046410250","display_name":"Daniel Probst","orcid":"https://orcid.org/0000-0003-1737-4407"},"institutions":[{"id":"https://openalex.org/I118564535","display_name":"University of Bern","ror":"https://ror.org/02k7v4d05","country_code":"CH","type":"education","lineage":["https://openalex.org/I118564535"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Daniel Probst","raw_affiliation_strings":["Department of Chemistry and\rBiochemistry, National Center for Competence in Research NCCR TransCure, University of Berne, Freiestrasse 3, 3012 Berne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Chemistry and\rBiochemistry, National Center for Competence in Research NCCR TransCure, University of Berne, Freiestrasse 3, 3012 Berne, Switzerland","institution_ids":["https://openalex.org/I118564535"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040848839","display_name":"Jean\u2010Louis Reymond","orcid":"https://orcid.org/0000-0003-2724-2942"},"institutions":[{"id":"https://openalex.org/I118564535","display_name":"University of Bern","ror":"https://ror.org/02k7v4d05","country_code":"CH","type":"education","lineage":["https://openalex.org/I118564535"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Jean-Louis Reymond","raw_affiliation_strings":["Department of Chemistry and\rBiochemistry, National Center for Competence in Research NCCR TransCure, University of Berne, Freiestrasse 3, 3012 Berne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Department of Chemistry and\rBiochemistry, National Center for Competence in Research NCCR TransCure, University of Berne, Freiestrasse 3, 3012 Berne, Switzerland","institution_ids":["https://openalex.org/I118564535"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5046410250"],"corresponding_institution_ids":["https://openalex.org/I118564535"],"apc_list":null,"apc_paid":null,"fwci":2.0207,"has_fulltext":false,"cited_by_count":88,"citation_normalized_percentile":{"value":0.87402905,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"58","issue":"1","first_page":"1","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9743000268936157,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9621000289916992,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/javascript","display_name":"JavaScript","score":0.8859682083129883},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7370504140853882},{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.73614501953125},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5277377367019653},{"id":"https://openalex.org/keywords/client-side","display_name":"Client-side","score":0.5217924118041992},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.4901028573513031},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41721630096435547},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.27344346046447754}],"concepts":[{"id":"https://openalex.org/C544833334","wikidata":"https://www.wikidata.org/wiki/Q2005","display_name":"JavaScript","level":2,"score":0.8859682083129883},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7370504140853882},{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.73614501953125},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5277377367019653},{"id":"https://openalex.org/C202477664","wikidata":"https://www.wikidata.org/wiki/Q1352449","display_name":"Client-side","level":2,"score":0.5217924118041992},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.4901028573513031},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41721630096435547},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.27344346046447754}],"mesh":[{"descriptor_ui":"D009930","descriptor_name":"Organic Chemicals","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D009930","descriptor_name":"Organic Chemicals","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D009930","descriptor_name":"Organic Chemicals","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013237","descriptor_name":"Stereoisomerism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013237","descriptor_name":"Stereoisomerism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013237","descriptor_name":"Stereoisomerism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015394","descriptor_name":"Molecular Structure","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017076","descriptor_name":"Computer-Aided Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017076","descriptor_name":"Computer-Aided Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017076","descriptor_name":"Computer-Aided Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1021/acs.jcim.7b00425","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.7b00425","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:29257869","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29257869","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:boris.unibe.ch:122691","is_oa":false,"landing_page_url":"https://boris.unibe.ch/122691/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401086","display_name":"Bern Open Repository and Information System (University of Bern)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I118564535","host_organization_name":"University of Bern","host_organization_lineage":["https://openalex.org/I118564535"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Probst, Daniel; Reymond, Jean-Louis (2018). SmilesDrawer: Parsing and Drawing SMILES-Encoded Molecular Structures Using Client-Side JavaScript. Journal of chemical information and modeling, 58(1), pp. 1-7. American Chemical Society 10.1021/acs.jcim.7b00425 &lt;http://dx.doi.org/10.1021/acs.jcim.7b00425&gt;","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6200000047683716,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320310992","display_name":"University of Bern","ror":"https://ror.org/02k7v4d05"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W986143497","https://openalex.org/W1508604947","https://openalex.org/W1721788892","https://openalex.org/W1966613725","https://openalex.org/W1971849220","https://openalex.org/W1975147762","https://openalex.org/W2018045485","https://openalex.org/W2038702914","https://openalex.org/W2075220720","https://openalex.org/W2096541451","https://openalex.org/W2096975829","https://openalex.org/W2100742364","https://openalex.org/W2101643211","https://openalex.org/W2102492798","https://openalex.org/W2114704115","https://openalex.org/W2117057011","https://openalex.org/W2120869341","https://openalex.org/W2130479394","https://openalex.org/W2157390113","https://openalex.org/W2159233442","https://openalex.org/W2163262659","https://openalex.org/W2167482691","https://openalex.org/W2170146596","https://openalex.org/W2176758925","https://openalex.org/W2315002870","https://openalex.org/W2346982987","https://openalex.org/W2559332747","https://openalex.org/W2596398464","https://openalex.org/W2604850519","https://openalex.org/W2759735121","https://openalex.org/W2766185799","https://openalex.org/W2769860552","https://openalex.org/W4206088053","https://openalex.org/W4233757090"],"related_works":["https://openalex.org/W6643695","https://openalex.org/W2943523602","https://openalex.org/W4381248170","https://openalex.org/W3189621521","https://openalex.org/W2173794830","https://openalex.org/W4254054560","https://openalex.org/W73270673","https://openalex.org/W2518019954","https://openalex.org/W2732083259","https://openalex.org/W1603971986"],"abstract_inverted_index":{"Here":[0],"we":[1],"present":[2],"SmilesDrawer,":[3],"a":[4,102,109],"dependency-free":[5],"JavaScript":[6],"component":[7],"capable":[8],"of":[9,74,95,97,112,127],"both":[10],"parsing":[11],"and":[12,26,34,41,48,60,138],"drawing":[13],"SMILES-encoded":[14],"molecular":[15,98],"structures":[16,44],"client-side,":[17],"developed":[18],"to":[19,27,80],"be":[20],"easily":[21],"integrated":[22],"into":[23],"web":[24,104],"projects":[25],"display":[28],"organic":[29],"molecules":[30],"in":[31,83],"large":[32],"numbers":[33],"fast":[35],"succession.":[36],"SmilesDrawer":[37,128],"can":[38],"draw":[39],"structurally":[40],"stereochemically":[42],"complex":[43],"such":[45],"as":[46,120,122],"maitotoxin":[47],"C<sub>60</sub>":[49],"without":[50,64],"using":[51],"templates,":[52],"yet":[53],"has":[54],"an":[55],"exceptionally":[56],"small":[57],"computational":[58],"footprint":[59],"low":[61],"memory":[62],"usage":[63],"the":[65,93,123],"requirement":[66],"for":[67],"loading":[68],"images":[69],"or":[70,87],"any":[71],"other":[72],"form":[73],"client-server":[75],"communication,":[76],"making":[77],"it":[78],"easy":[79],"integrate":[81],"even":[82],"secure":[84],"(intranet,":[85],"firewalled)":[86],"offline":[88],"applications.":[89],"These":[90],"features":[91],"allow":[92],"rendering":[94],"thousands":[96],"structure":[99],"drawings":[100],"on":[101,108,131],"single":[103],"page":[105],"within":[106],"seconds":[107],"wide":[110],"range":[111],"hardware":[113],"supporting":[114],"modern":[115],"browsers.":[116],"The":[117],"source":[118],"code":[119],"well":[121],"most":[124],"recent":[125],"build":[126],"is":[129],"available":[130],"Github":[132],"(":[133],"http://doc.gdb.tools/smilesDrawer/":[134],").":[135],"Both":[136],"yarn":[137],"npm":[139],"packages":[140],"are":[141],"also":[142],"available.":[143]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":13},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":14},{"year":2021,"cited_by_count":21},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":1}],"updated_date":"2026-04-07T14:57:38.498316","created_date":"2025-10-10T00:00:00"}