{"id":"https://openalex.org/W7162534894","doi":"https://doi.org/10.1021/acs.jcim.6c00407","title":"When Trees Guide Molecules: Multiobjective Search in de Novo Drug Design","display_name":"When Trees Guide Molecules: Multiobjective Search in de Novo Drug Design","publication_year":2026,"publication_date":"2026-05-27","ids":{"openalex":"https://openalex.org/W7162534894","doi":"https://doi.org/10.1021/acs.jcim.6c00407","pmid":"https://pubmed.ncbi.nlm.nih.gov/42198900"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.6c00407","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.6c00407","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006541780","display_name":"Maksym Druchok","orcid":"https://orcid.org/0000-0003-3094-6414"},"institutions":[{"id":"https://openalex.org/I1293456974","display_name":"NatureServe","ror":"https://ror.org/02rnyzs79","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1293456974"]},{"id":"https://openalex.org/I4210122792","display_name":"Yukhnovskii Institute for Condensed Matter Physics of the National Academy of Sciences of Ukraine","ror":"https://ror.org/03441jy26","country_code":"UA","type":"facility","lineage":["https://openalex.org/I149851306","https://openalex.org/I4210122792"]}],"countries":["UA","US"],"is_corresponding":false,"raw_author_name":"Maksym Druchok","raw_affiliation_strings":["SoftServe, Inc., 2d Sadova Street, 79021 Lviv, Ukraine","Yukhnovskii Institute for Condensed Matter Physics, 1 Svientsitskii Street, 79011 Lviv, Ukraine"],"raw_orcid":"https://orcid.org/0000-0003-3094-6414","affiliations":[{"raw_affiliation_string":"SoftServe, Inc., 2d Sadova Street, 79021 Lviv, Ukraine","institution_ids":["https://openalex.org/I1293456974"]},{"raw_affiliation_string":"Yukhnovskii Institute for Condensed Matter Physics, 1 Svientsitskii Street, 79011 Lviv, Ukraine","institution_ids":["https://openalex.org/I4210122792"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5137111972","display_name":"Andrij Rovenchak","orcid":"https://orcid.org/0000-0002-0452-6873"},"institutions":[{"id":"https://openalex.org/I1293456974","display_name":"NatureServe","ror":"https://ror.org/02rnyzs79","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1293456974"]},{"id":"https://openalex.org/I200280692","display_name":"Lviv University","ror":"https://ror.org/01s7y5e82","country_code":"UA","type":"education","lineage":["https://openalex.org/I200280692"]}],"countries":["UA","US"],"is_corresponding":false,"raw_author_name":"Andrij Rovenchak","raw_affiliation_strings":["Professor Ivan Vakarchuk Department for Theoretical Physics, Ivan Franko National University of Lviv, 12 Drahomanov Street, 79005 Lviv, Ukraine","SoftServe, Inc., 2d Sadova Street, 79021 Lviv, Ukraine"],"raw_orcid":"https://orcid.org/0000-0002-0452-6873","affiliations":[{"raw_affiliation_string":"Professor Ivan Vakarchuk Department for Theoretical Physics, Ivan Franko National University of Lviv, 12 Drahomanov Street, 79005 Lviv, Ukraine","institution_ids":["https://openalex.org/I200280692"]},{"raw_affiliation_string":"SoftServe, Inc., 2d Sadova Street, 79021 Lviv, Ukraine","institution_ids":["https://openalex.org/I1293456974"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":4500,"currency":"USD","value_usd":4500},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.54863276,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"66","issue":"11","first_page":"6313","last_page":"6333"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.34599998593330383,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.34599998593330383,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13180","display_name":"Chemistry and Chemical Engineering","score":0.02630000002682209,"subfield":{"id":"https://openalex.org/subfields/2304","display_name":"Environmental Chemistry"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11053","display_name":"Process Optimization and Integration","score":0.025100000202655792,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.5540000200271606},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.3312000036239624},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.27869999408721924},{"id":"https://openalex.org/keywords/multi-objective-optimization","display_name":"Multi-objective optimization","score":0.27140000462532043},{"id":"https://openalex.org/keywords/drug-response","display_name":"Drug response","score":0.25540000200271606}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5774000287055969},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.5540000200271606},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34929999709129333},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3465999960899353},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.3312000036239624},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.314300000667572},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.27869999408721924},{"id":"https://openalex.org/C68781425","wikidata":"https://www.wikidata.org/wiki/Q2052203","display_name":"Multi-objective optimization","level":2,"score":0.27140000462532043},{"id":"https://openalex.org/C2994119904","wikidata":"https://www.wikidata.org/wiki/Q1251001","display_name":"Drug response","level":3,"score":0.25540000200271606},{"id":"https://openalex.org/C84525736","wikidata":"https://www.wikidata.org/wiki/Q831366","display_name":"Decision tree","level":2,"score":0.24480000138282776}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006633","descriptor_name":"Histamine Antagonists","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D006633","descriptor_name":"Histamine Antagonists","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D006633","descriptor_name":"Histamine Antagonists","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006633","descriptor_name":"Histamine Antagonists","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009010","descriptor_name":"Monte Carlo Method","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009010","descriptor_name":"Monte Carlo Method","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011968","descriptor_name":"Receptors, Histamine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011968","descriptor_name":"Receptors, Histamine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011968","descriptor_name":"Receptors, Histamine","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011968","descriptor_name":"Receptors, Histamine","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012995","descriptor_name":"Solubility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012995","descriptor_name":"Solubility","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064446","descriptor_name":"Orexin Receptors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D064446","descriptor_name":"Orexin Receptors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1021/acs.jcim.6c00407","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.6c00407","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:42198900","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42198900","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":"Journal Article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","score":0.571230947971344,"display_name":"Zero hunger"}],"awards":[{"id":"https://openalex.org/G2567016342","display_name":null,"funder_award_id":"2023.05/0019","funder_id":"https://openalex.org/F4320318013","funder_display_name":"National Research Foundation of Ukraine"}],"funders":[{"id":"https://openalex.org/F4320318013","display_name":"National Research Foundation of Ukraine","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":138,"referenced_works":["https://openalex.org/W330953206","https://openalex.org/W1019830208","https://openalex.org/W1523859212","https://openalex.org/W1869829652","https://openalex.org/W1972234779","https://openalex.org/W1975147762","https://openalex.org/W1985320283","https://openalex.org/W1988037271","https://openalex.org/W1989927329","https://openalex.org/W2011657053","https://openalex.org/W2012222816","https://openalex.org/W2020602991","https://openalex.org/W2027740042","https://openalex.org/W2036709586","https://openalex.org/W2038702914","https://openalex.org/W2044834685","https://openalex.org/W2046589863","https://openalex.org/W2046842230","https://openalex.org/W2058192020","https://openalex.org/W2064993255","https://openalex.org/W2076498053","https://openalex.org/W2080798693","https://openalex.org/W2090995825","https://openalex.org/W2091959199","https://openalex.org/W2092285329","https://openalex.org/W2096864392","https://openalex.org/W2098040987","https://openalex.org/W2102943634","https://openalex.org/W2111078532","https://openalex.org/W2121836743","https://openalex.org/W2126138337","https://openalex.org/W2126316555","https://openalex.org/W2127398647","https://openalex.org/W2127587566","https://openalex.org/W2130717252","https://openalex.org/W2134967712","https://openalex.org/W2143061492","https://openalex.org/W2160592148","https://openalex.org/W2167128125","https://openalex.org/W2199485679","https://openalex.org/W2204695023","https://openalex.org/W2205893140","https://openalex.org/W2294051689","https://openalex.org/W2529996553","https://openalex.org/W2587598315","https://openalex.org/W2593436234","https://openalex.org/W2594183968","https://openalex.org/W2604205578","https://openalex.org/W2610148085","https://openalex.org/W2615576800","https://openalex.org/W2736137960","https://openalex.org/W2747592475","https://openalex.org/W2775714759","https://openalex.org/W2777416523","https://openalex.org/W2779266190","https://openalex.org/W2780769889","https://openalex.org/W2810023675","https://openalex.org/W2900694120","https://openalex.org/W2902494076","https://openalex.org/W2912735973","https://openalex.org/W2913351693","https://openalex.org/W2943076804","https://openalex.org/W2949986955","https://openalex.org/W2956703999","https://openalex.org/W2956961449","https://openalex.org/W2963609389","https://openalex.org/W2964819359","https://openalex.org/W2966797369","https://openalex.org/W2970175280","https://openalex.org/W2970196665","https://openalex.org/W3008009497","https://openalex.org/W3008713545","https://openalex.org/W3026536569","https://openalex.org/W3044169888","https://openalex.org/W3047072418","https://openalex.org/W3084796436","https://openalex.org/W3098846260","https://openalex.org/W3109353507","https://openalex.org/W3127521151","https://openalex.org/W3129288181","https://openalex.org/W3133131371","https://openalex.org/W3133246485","https://openalex.org/W3151536792","https://openalex.org/W3154258817","https://openalex.org/W3158535672","https://openalex.org/W3168436232","https://openalex.org/W3171948774","https://openalex.org/W3183887791","https://openalex.org/W3200430486","https://openalex.org/W3200806939","https://openalex.org/W3211731655","https://openalex.org/W4210392356","https://openalex.org/W4213426032","https://openalex.org/W4214567217","https://openalex.org/W4220785481","https://openalex.org/W4226166856","https://openalex.org/W4239510810","https://openalex.org/W4252536872","https://openalex.org/W4281784992","https://openalex.org/W4306293806","https://openalex.org/W4306412305","https://openalex.org/W4306652558","https://openalex.org/W4306986475","https://openalex.org/W4308294181","https://openalex.org/W4309736762","https://openalex.org/W4317625850","https://openalex.org/W4321606696","https://openalex.org/W4362733779","https://openalex.org/W4367553744","https://openalex.org/W4384663992","https://openalex.org/W4385688843","https://openalex.org/W4388455891","https://openalex.org/W4388928955","https://openalex.org/W4390581359","https://openalex.org/W4390724514","https://openalex.org/W4391217484","https://openalex.org/W4391317152","https://openalex.org/W4391610180","https://openalex.org/W4391810305","https://openalex.org/W4392015344","https://openalex.org/W4392656047","https://openalex.org/W4392918434","https://openalex.org/W4393097303","https://openalex.org/W4395053803","https://openalex.org/W4396868756","https://openalex.org/W4398186694","https://openalex.org/W4400402545","https://openalex.org/W4400656170","https://openalex.org/W4402814842","https://openalex.org/W4403026912","https://openalex.org/W4405073997","https://openalex.org/W4406191849","https://openalex.org/W4408341773","https://openalex.org/W4412712356","https://openalex.org/W4413920884","https://openalex.org/W4415372257","https://openalex.org/W7133129775","https://openalex.org/W7133528604"],"related_works":[],"abstract_inverted_index":{"drug":[0],"design.":[1]},"counts_by_year":[],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2026-05-28T00:00:00"}
