{"id":"https://openalex.org/W4411929391","doi":"https://doi.org/10.1021/acs.jcim.5c01029","title":"Exploring Protein\u2013Protein Docking Tools: Comprehensive Insights into Traditional and Deep-Learning Approaches","display_name":"Exploring Protein\u2013Protein Docking Tools: Comprehensive Insights into Traditional and Deep-Learning Approaches","publication_year":2025,"publication_date":"2025-07-02","ids":{"openalex":"https://openalex.org/W4411929391","doi":"https://doi.org/10.1021/acs.jcim.5c01029","pmid":"https://pubmed.ncbi.nlm.nih.gov/40600579"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.5c01029","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.5c01029","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5118784594","display_name":"Mina Barhoon","orcid":"https://orcid.org/0009-0000-9560-041X"},"institutions":[{"id":"https://openalex.org/I1187138","display_name":"Razi University","ror":"https://ror.org/02ynb0474","country_code":"IR","type":"education","lineage":["https://openalex.org/I1187138"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Mina Barhoon","raw_affiliation_strings":["Bioinformatics Lab., Department of Biology, School of Sciences","Razi University"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Lab., Department of Biology, School of Sciences","institution_ids":[]},{"raw_affiliation_string":"Razi University","institution_ids":["https://openalex.org/I1187138"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5006240693","display_name":"Hamid Mahdiuni","orcid":"https://orcid.org/0000-0003-2450-6180"},"institutions":[{"id":"https://openalex.org/I1187138","display_name":"Razi University","ror":"https://ror.org/02ynb0474","country_code":"IR","type":"education","lineage":["https://openalex.org/I1187138"]}],"countries":["IR"],"is_corresponding":true,"raw_author_name":"Hamid Mahdiuni","raw_affiliation_strings":["Bioinformatics Lab., Department of Biology, School of Sciences","Razi University"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Lab., Department of Biology, School of Sciences","institution_ids":[]},{"raw_affiliation_string":"Razi University","institution_ids":["https://openalex.org/I1187138"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5006240693"],"corresponding_institution_ids":["https://openalex.org/I1187138"],"apc_list":null,"apc_paid":null,"fwci":0.8073,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.7373271,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"65","issue":"13","first_page":"6446","last_page":"6469"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.7329216003417969},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5402900576591492},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5324742794036865},{"id":"https://openalex.org/keywords/protein\u2013ligand-docking","display_name":"Protein\u2013ligand docking","score":0.5274308323860168},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4742421507835388},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.45750167965888977},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.43312519788742065},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3767050802707672},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3460199534893036},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.342472106218338},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.3418850004673004},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2178819477558136},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.18670397996902466},{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.18639743328094482},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.09472474455833435}],"concepts":[{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.7329216003417969},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5402900576591492},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5324742794036865},{"id":"https://openalex.org/C77319485","wikidata":"https://www.wikidata.org/wiki/Q7251520","display_name":"Protein\u2013ligand docking","level":4,"score":0.5274308323860168},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4742421507835388},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.45750167965888977},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.43312519788742065},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3767050802707672},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3460199534893036},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.342472106218338},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.3418850004673004},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2178819477558136},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.18670397996902466},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.18639743328094482},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.09472474455833435},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1021/acs.jcim.5c01029","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.5c01029","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:40600579","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40600579","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":266,"referenced_works":["https://openalex.org/W86045349","https://openalex.org/W174644880","https://openalex.org/W585106548","https://openalex.org/W1004511050","https://openalex.org/W1030883578","https://openalex.org/W1194601030","https://openalex.org/W1565809263","https://openalex.org/W1588645461","https://openalex.org/W1601270585","https://openalex.org/W1896254721","https://openalex.org/W1915490970","https://openalex.org/W1965207188","https://openalex.org/W1968430567","https://openalex.org/W1968680692","https://openalex.org/W1971062326","https://openalex.org/W1975642089","https://openalex.org/W1979284950","https://openalex.org/W1992739911","https://openalex.org/W2000383223","https://openalex.org/W2014744153","https://openalex.org/W2017226419","https://openalex.org/W2019691413","https://openalex.org/W2030728145","https://openalex.org/W2038542598","https://openalex.org/W2053174787","https://openalex.org/W2053538195","https://openalex.org/W2055905702","https://openalex.org/W2058190388","https://openalex.org/W2063831812","https://openalex.org/W2064660701","https://openalex.org/W2066244933","https://openalex.org/W2069712458","https://openalex.org/W2074713036","https://openalex.org/W2076753628","https://openalex.org/W2091734240","https://openalex.org/W2093033457","https://openalex.org/W2099907934","https://openalex.org/W2100025509","https://openalex.org/W2103187077","https://openalex.org/W2105438341","https://openalex.org/W2106210646","https://openalex.org/W2108508060","https://openalex.org/W2110505462","https://openalex.org/W2110585060","https://openalex.org/W2111387452","https://openalex.org/W2117905193","https://openalex.org/W2118401855","https://openalex.org/W2118514515","https://openalex.org/W2118542302","https://openalex.org/W2118621584","https://openalex.org/W2123028643","https://openalex.org/W2126265982","https://openalex.org/W2128326332","https://openalex.org/W2129414710","https://openalex.org/W2131063642","https://openalex.org/W2131900949","https://openalex.org/W2132262459","https://openalex.org/W2133712572","https://openalex.org/W2136777954","https://openalex.org/W2137442080","https://openalex.org/W2140522686","https://openalex.org/W2143094533","https://openalex.org/W2144954642","https://openalex.org/W2150399099","https://openalex.org/W2151460035","https://openalex.org/W2152872596","https://openalex.org/W2153255725","https://openalex.org/W2153983456","https://openalex.org/W2154019529","https://openalex.org/W2157509969","https://openalex.org/W2159817444","https://openalex.org/W2159820766","https://openalex.org/W2162682281","https://openalex.org/W2163298631","https://openalex.org/W2167300514","https://openalex.org/W2170421654","https://openalex.org/W2170564629","https://openalex.org/W2171249995","https://openalex.org/W2264791733","https://openalex.org/W2304188484","https://openalex.org/W2320663134","https://openalex.org/W2342678031","https://openalex.org/W2346627216","https://openalex.org/W2400624552","https://openalex.org/W2470491938","https://openalex.org/W2503662670","https://openalex.org/W2512372054","https://openalex.org/W2556787714","https://openalex.org/W2557083319","https://openalex.org/W2561826764","https://openalex.org/W2572080171","https://openalex.org/W2606439133","https://openalex.org/W2609643846","https://openalex.org/W2615136515","https://openalex.org/W2625186389","https://openalex.org/W2734773836","https://openalex.org/W2753374271","https://openalex.org/W2754800853","https://openalex.org/W2765910235","https://openalex.org/W2766284073","https://openalex.org/W2799876761","https://openalex.org/W2800677598","https://openalex.org/W2804651207","https://openalex.org/W2883137045","https://openalex.org/W2888311493","https://openalex.org/W2890416025","https://openalex.org/W2899758436","https://openalex.org/W2912457464","https://openalex.org/W2915344963","https://openalex.org/W2921473648","https://openalex.org/W2921610364","https://openalex.org/W2923988796","https://openalex.org/W2924194203","https://openalex.org/W2940537888","https://openalex.org/W2945033221","https://openalex.org/W2945172910","https://openalex.org/W2948988173","https://openalex.org/W2949867299","https://openalex.org/W2950365860","https://openalex.org/W2952059807","https://openalex.org/W2953103783","https://openalex.org/W2972485984","https://openalex.org/W2979750740","https://openalex.org/W2982862182","https://openalex.org/W2992752586","https://openalex.org/W2992871640","https://openalex.org/W2996827397","https://openalex.org/W2996908194","https://openalex.org/W2997060324","https://openalex.org/W3000230289","https://openalex.org/W3003697393","https://openalex.org/W3004402700","https://openalex.org/W3007998232","https://openalex.org/W3009821243","https://openalex.org/W3010761615","https://openalex.org/W3011282750","https://openalex.org/W3012320348","https://openalex.org/W3015438624","https://openalex.org/W3027975282","https://openalex.org/W3032924118","https://openalex.org/W3038491195","https://openalex.org/W3039124879","https://openalex.org/W3040256181","https://openalex.org/W3040258294","https://openalex.org/W3040624471","https://openalex.org/W3041180919","https://openalex.org/W3042405353","https://openalex.org/W3047882387","https://openalex.org/W3081286612","https://openalex.org/W3081574977","https://openalex.org/W3082651942","https://openalex.org/W3087769169","https://openalex.org/W3089763176","https://openalex.org/W3092070807","https://openalex.org/W3092123400","https://openalex.org/W3093976970","https://openalex.org/W3095849807","https://openalex.org/W3098851962","https://openalex.org/W3100159300","https://openalex.org/W3125269130","https://openalex.org/W3127949223","https://openalex.org/W3131435592","https://openalex.org/W3132191748","https://openalex.org/W3132448805","https://openalex.org/W3134751001","https://openalex.org/W3135181189","https://openalex.org/W3135642867","https://openalex.org/W3146157593","https://openalex.org/W3148711710","https://openalex.org/W3151139169","https://openalex.org/W3157344551","https://openalex.org/W3157915108","https://openalex.org/W3158075195","https://openalex.org/W3161581870","https://openalex.org/W3162082122","https://openalex.org/W3162459364","https://openalex.org/W3164107346","https://openalex.org/W3171236517","https://openalex.org/W3177828909","https://openalex.org/W3184909979","https://openalex.org/W3186179742","https://openalex.org/W3187431608","https://openalex.org/W3187474504","https://openalex.org/W3199423294","https://openalex.org/W3201869122","https://openalex.org/W3202105508","https://openalex.org/W3206017014","https://openalex.org/W3212562354","https://openalex.org/W3216616254","https://openalex.org/W4200182440","https://openalex.org/W4200461926","https://openalex.org/W4214770605","https://openalex.org/W4220670584","https://openalex.org/W4220727998","https://openalex.org/W4220824576","https://openalex.org/W4220887281","https://openalex.org/W4224247942","https://openalex.org/W4225866265","https://openalex.org/W4238013285","https://openalex.org/W4280623022","https://openalex.org/W4281708617","https://openalex.org/W4281742422","https://openalex.org/W4282913408","https://openalex.org/W4282945561","https://openalex.org/W4285392187","https://openalex.org/W4289947310","https://openalex.org/W4291021611","https://openalex.org/W4293846201","https://openalex.org/W4295165394","https://openalex.org/W4306797787","https://openalex.org/W4307568284","https://openalex.org/W4309438076","https://openalex.org/W4309862248","https://openalex.org/W4310699966","https://openalex.org/W4311718430","https://openalex.org/W4315432725","https://openalex.org/W4318897420","https://openalex.org/W4319826837","https://openalex.org/W4320495200","https://openalex.org/W4321276011","https://openalex.org/W4324129241","https://openalex.org/W4362510910","https://openalex.org/W4364374800","https://openalex.org/W4364382221","https://openalex.org/W4365146607","https://openalex.org/W4366001157","https://openalex.org/W4376617817","https://openalex.org/W4382982095","https://openalex.org/W4383216409","https://openalex.org/W4384663992","https://openalex.org/W4385161902","https://openalex.org/W4385387090","https://openalex.org/W4385463106","https://openalex.org/W4386122777","https://openalex.org/W4386209299","https://openalex.org/W4386293079","https://openalex.org/W4388092799","https://openalex.org/W4388154154","https://openalex.org/W4388571183","https://openalex.org/W4389285741","https://openalex.org/W4390245367","https://openalex.org/W4390734415","https://openalex.org/W4390876228","https://openalex.org/W4391430717","https://openalex.org/W4392021346","https://openalex.org/W4392490110","https://openalex.org/W4392883366","https://openalex.org/W4393950872","https://openalex.org/W4394652010","https://openalex.org/W4396636573","https://openalex.org/W4396721167","https://openalex.org/W4396774778","https://openalex.org/W4398776590","https://openalex.org/W4398782923","https://openalex.org/W4399731408","https://openalex.org/W4400150297","https://openalex.org/W4400483562","https://openalex.org/W4400892254","https://openalex.org/W4401418198","https://openalex.org/W4402801121","https://openalex.org/W4402967140","https://openalex.org/W4404292709","https://openalex.org/W4406699368","https://openalex.org/W4407142832","https://openalex.org/W4408413602","https://openalex.org/W6892026214"],"related_works":["https://openalex.org/W1581147483","https://openalex.org/W4310018788","https://openalex.org/W4398796548","https://openalex.org/W2329052364","https://openalex.org/W2162967120","https://openalex.org/W1567411871","https://openalex.org/W2553094381","https://openalex.org/W2072180710","https://openalex.org/W2794807012","https://openalex.org/W2301625241"],"abstract_inverted_index":{"Protein-protein":[0],"interactions":[1,27],"are":[2,112],"crucial":[3],"for":[4,40,61,69,92,126],"numerous":[5],"biological":[6],"activities":[7],"such":[8],"as":[9,37,39],"signaling,":[10],"enzyme":[11],"catalysis,":[12],"gene":[13],"expression":[14],"regulation,":[15],"cell":[16],"adhesion,":[17],"immune":[18],"response,":[19],"and":[20,47,72,100,107,118],"drug":[21],"action.":[22],"Structural":[23],"characterization":[24,52],"of":[25,32,87,98,109],"these":[26],"can":[28],"elucidate":[29],"the":[30,76,88,105],"functions":[31],"proteins":[33],"in":[34,115],"living":[35],"systems,":[36],"well":[38],"designing":[41],"novel":[42],"therapeutics":[43],"with":[44],"high":[45],"specificity":[46],"low":[48],"toxicity.":[49],"Since":[50],"experimental":[51],"is":[53],"difficult,":[54],"several":[55],"computational":[56],"tools":[57,91,125],"have":[58],"been":[59],"developed":[60],"protein-protein":[62,93],"docking.":[63],"However,":[64],"it":[65],"may":[66],"be":[67],"difficult":[68],"many":[70],"researchers":[71,121],"scientists":[73],"to":[74],"find":[75],"most":[77],"suitable":[78,124],"tool":[79,111],"quickly.":[80],"This":[81],"assessment":[82],"provides":[83],"a":[84],"comprehensive":[85],"review":[86],"commonly":[89],"used":[90],"docking":[94],"analysis,":[95],"which":[96],"consists":[97],"deep-learning-based":[99],"traditional":[101],"tools.":[102],"In":[103],"addition,":[104],"advantages":[106],"limitations":[108],"each":[110],"also":[113],"discussed":[114],"this":[116],"paper":[117],"further":[119],"help":[120],"select":[122],"more":[123],"their":[127],"study.":[128]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-03-27T05:58:40.876381","created_date":"2025-10-10T00:00:00"}
