{"id":"https://openalex.org/W4405474662","doi":"https://doi.org/10.1021/acs.jcim.4c01927","title":"Exploring Binding Sites in Chagas Disease Protein TcP21 Using Integrated Mixed Solvent Molecular Dynamics Approaches","display_name":"Exploring Binding Sites in Chagas Disease Protein TcP21 Using Integrated Mixed Solvent Molecular Dynamics Approaches","publication_year":2024,"publication_date":"2024-12-17","ids":{"openalex":"https://openalex.org/W4405474662","doi":"https://doi.org/10.1021/acs.jcim.4c01927","pmid":"https://pubmed.ncbi.nlm.nih.gov/39686861"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.4c01927","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c01927","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1021/acs.jcim.4c01927","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078669515","display_name":"William Oliveira Sot\u00e9","orcid":"https://orcid.org/0000-0002-1621-624X"},"institutions":[{"id":"https://openalex.org/I80850581","display_name":"Universidade Federal de Uberl\u00e2ndia","ror":"https://ror.org/04x3wvr31","country_code":"BR","type":"education","lineage":["https://openalex.org/I80850581"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"William Oliveira Sot\u00e9","raw_affiliation_strings":["Institute of Chemistry, Federal University of Uberl\u00e2ndia, Uberl\u00e2ndia 38400-902, Brazil"],"affiliations":[{"raw_affiliation_string":"Institute of Chemistry, Federal University of Uberl\u00e2ndia, Uberl\u00e2ndia 38400-902, Brazil","institution_ids":["https://openalex.org/I80850581"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5031015698","display_name":"Moacyr Comar","orcid":"https://orcid.org/0000-0002-4400-6039"},"institutions":[{"id":"https://openalex.org/I80850581","display_name":"Universidade Federal de Uberl\u00e2ndia","ror":"https://ror.org/04x3wvr31","country_code":"BR","type":"education","lineage":["https://openalex.org/I80850581"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Moacyr Comar Junior","raw_affiliation_strings":["Institute of Chemistry, Federal University of Uberl\u00e2ndia, Uberl\u00e2ndia 38400-902, Brazil"],"affiliations":[{"raw_affiliation_string":"Institute of Chemistry, Federal University of Uberl\u00e2ndia, Uberl\u00e2ndia 38400-902, Brazil","institution_ids":["https://openalex.org/I80850581"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5031015698"],"corresponding_institution_ids":["https://openalex.org/I80850581"],"apc_list":null,"apc_paid":null,"fwci":0.3752,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.68518986,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"65","issue":"1","first_page":"363","last_page":"377"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10890","display_name":"Trypanosoma species research and implications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10890","display_name":"Trypanosoma species research and implications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9839000105857849,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10835","display_name":"Carbohydrate Chemistry and Synthesis","score":0.9666000008583069,"subfield":{"id":"https://openalex.org/subfields/1605","display_name":"Organic Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chagas-disease","display_name":"Chagas disease","score":0.8122808337211609},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.5676578879356384},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4921573996543884},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.4409894645214081},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.4320727586746216},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2738606929779053},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.26938608288764954},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25400808453559875},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.212802916765213},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.09683769941329956}],"concepts":[{"id":"https://openalex.org/C112418997","wikidata":"https://www.wikidata.org/wiki/Q649558","display_name":"Chagas disease","level":2,"score":0.8122808337211609},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.5676578879356384},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4921573996543884},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.4409894645214081},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.4320727586746216},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2738606929779053},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.26938608288764954},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25400808453559875},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.212802916765213},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.09683769941329956}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D014349","descriptor_name":"Trypanosoma cruzi","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014349","descriptor_name":"Trypanosoma cruzi","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014349","descriptor_name":"Trypanosoma cruzi","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014349","descriptor_name":"Trypanosoma cruzi","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014349","descriptor_name":"Trypanosoma cruzi","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014349","descriptor_name":"Trypanosoma cruzi","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000469","qualifier_name":"parasitology","is_major_topic":true},{"descriptor_ui":"D014355","descriptor_name":"Chagas Disease","qualifier_ui":"Q000469","qualifier_name":"parasitology","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D015800","descriptor_name":"Protozoan Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1021/acs.jcim.4c01927","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c01927","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:39686861","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39686861","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11733930","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11733930","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1021/acs.jcim.4c01927","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c01927","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.4300000071525574,"id":"https://metadata.un.org/sdg/2"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":99,"referenced_works":["https://openalex.org/W164772869","https://openalex.org/W244233237","https://openalex.org/W1031578623","https://openalex.org/W1896845502","https://openalex.org/W1965192023","https://openalex.org/W1972043575","https://openalex.org/W1974987349","https://openalex.org/W1976499671","https://openalex.org/W1977075983","https://openalex.org/W1978498560","https://openalex.org/W1986191025","https://openalex.org/W1994923840","https://openalex.org/W2003949305","https://openalex.org/W2023125550","https://openalex.org/W2024250810","https://openalex.org/W2025157967","https://openalex.org/W2029667189","https://openalex.org/W2035266068","https://openalex.org/W2035687084","https://openalex.org/W2046412723","https://openalex.org/W2051381895","https://openalex.org/W2057477511","https://openalex.org/W2059013803","https://openalex.org/W2062051632","https://openalex.org/W2067174909","https://openalex.org/W2076736728","https://openalex.org/W2081693079","https://openalex.org/W2083431520","https://openalex.org/W2092973995","https://openalex.org/W2111108708","https://openalex.org/W2116211618","https://openalex.org/W2119318585","https://openalex.org/W2125581925","https://openalex.org/W2125977755","https://openalex.org/W2126234813","https://openalex.org/W2134967712","https://openalex.org/W2135250894","https://openalex.org/W2139950821","https://openalex.org/W2148284063","https://openalex.org/W2148455294","https://openalex.org/W2151334055","https://openalex.org/W2151884301","https://openalex.org/W2156224401","https://openalex.org/W2168865322","https://openalex.org/W2170007322","https://openalex.org/W2223680987","https://openalex.org/W2333149052","https://openalex.org/W2415301444","https://openalex.org/W2419546766","https://openalex.org/W2440786981","https://openalex.org/W2483704935","https://openalex.org/W2556635462","https://openalex.org/W2601204709","https://openalex.org/W2601706075","https://openalex.org/W2606142660","https://openalex.org/W2618686671","https://openalex.org/W2777363962","https://openalex.org/W2784128090","https://openalex.org/W2961547110","https://openalex.org/W2989639510","https://openalex.org/W2995119220","https://openalex.org/W2996822411","https://openalex.org/W3004329511","https://openalex.org/W3033425322","https://openalex.org/W3042276666","https://openalex.org/W3093451930","https://openalex.org/W3132180101","https://openalex.org/W3137735506","https://openalex.org/W3167593208","https://openalex.org/W3168436232","https://openalex.org/W3186179742","https://openalex.org/W3197404889","https://openalex.org/W4210332517","https://openalex.org/W4229367658","https://openalex.org/W4281476460","https://openalex.org/W4281692789","https://openalex.org/W4281735653","https://openalex.org/W4285127515","https://openalex.org/W4285215680","https://openalex.org/W4285261595","https://openalex.org/W4313201804","https://openalex.org/W4319825952","https://openalex.org/W4321493089","https://openalex.org/W4323066932","https://openalex.org/W4368342718","https://openalex.org/W4380422705","https://openalex.org/W4387312343","https://openalex.org/W4387671499","https://openalex.org/W4387826475","https://openalex.org/W4388487587","https://openalex.org/W4389128599","https://openalex.org/W4389627623","https://openalex.org/W4390109324","https://openalex.org/W4394596457","https://openalex.org/W4394910038","https://openalex.org/W4396721167","https://openalex.org/W4397027243","https://openalex.org/W4400056878","https://openalex.org/W4401810668"],"related_works":["https://openalex.org/W4387497383","https://openalex.org/W2948807893","https://openalex.org/W2899084033","https://openalex.org/W2778153218","https://openalex.org/W2748952813","https://openalex.org/W1531601525","https://openalex.org/W4391375266","https://openalex.org/W2078814861","https://openalex.org/W2527526854","https://openalex.org/W1976181487"],"abstract_inverted_index":{"Chagas":[0,93,293],"disease,":[1],"caused":[2],"by":[3,70,184],"the":[4,49,53,87,177,181,203,212,266,270],"protozoan":[5],"Trypanosoma":[6],"cruzi,":[7],"remains":[8],"a":[9,64,113,124,172,215,231,250],"significant":[10,232],"global":[11],"health":[12],"burden,":[13],"particularly":[14,101],"in":[15,77,102,234,257,292],"Latin":[16],"America,":[17],"where":[18],"millions":[19],"are":[20,43],"at":[21],"risk.":[22],"This":[23,59,237],"disease":[24,94],"predominantly":[25],"affects":[26],"socioeconomically":[27],"vulnerable":[28],"populations,":[29],"aggravating":[30],"economic":[31],"inequality,":[32],"marginalization,":[33],"and":[34,55,115,148,161,193,199,224,253,289],"low":[35],"political":[36],"visibility.":[37],"Despite":[38],"extensive":[39],"research,":[40],"effective":[41,116],"treatments":[42],"still":[44,251],"lacking,":[45],"partly":[46],"due":[47],"to":[48,209,242,248],"complex":[50],"biology":[51],"of":[52,89,128,180,202,217],"parasite":[54],"its":[56,108,290],"infection":[57,80],"mechanisms.":[58],"study":[60,238,280],"focuses":[61],"on":[62,107,171,176],"TcP21,":[63],"novel":[65],"21":[66],"kDa":[67],"protein":[68,255],"secreted":[69],"extracellular":[71],"amastigotes,":[72],"which":[73],"has":[74],"been":[75],"implicated":[76],"<i>T.":[78,258],"cruzi</i>":[79,259],"via":[81,214],"an":[82],"alternative":[83],"infective":[84],"pathway.":[85],"Although":[86],"potential":[88,104,158],"TcP21":[90],"for":[91,118,275,284],"understanding":[92],"is":[95,99],"promising,":[96],"further":[97,285],"exploration":[98],"necessary,":[100],"identifying":[103],"binding":[105,120,159],"sites":[106,160],"surface.":[109],"Computational":[110],"tools":[111],"offer":[112],"versatile":[114],"strategy":[117],"preliminary":[119],"site":[121,174,213],"assessment,":[122],"facilitating":[123],"more":[125],"cost-efficient":[126],"allocation":[127],"experimental":[129],"resources.":[130],"In":[131,262],"this":[132,263,279],"study,":[133],"we":[134,277],"employed":[135],"three":[136,168,271],"independent":[137],"computational":[138],"approaches\u2500mixed":[139],"solvent":[140],"molecular":[141,146,154],"dynamics":[142,155],"simulations":[143],"(MSMD),":[144],"fragment-based":[145],"docking,":[147],"pharmacophore":[149,204],"model":[150],"docking":[151],"coupled":[152],"with":[153,211],"simulations\u2500to":[156],"identify":[157],"provide":[162],"comprehensive":[163],"insights":[164,283],"into":[165,287],"TcP21.":[166],"The":[167,195],"methodologies":[169],"converged":[170],"common":[173],"located":[175],"external":[178],"surface":[179],"protein,":[182],"characterized":[183],"key":[185],"residues":[186],"such":[187],"as":[188],"GLU55,":[189],"ASP52,":[190],"VAL70,":[191],"ILE62,":[192],"TRP77.":[194],"protonated":[196],"amino,":[197],"acetamido,":[198],"phenyl":[200],"groups":[201,229],"probe":[205],"were":[206],"consistently":[207],"observed":[208],"interact":[210],"network":[216],"salt":[218],"bridges,":[219],"hydrogen":[220],"bonds,":[221],"charge-charge":[222],"interactions,":[223,226],"alkyl-\u03c0":[225],"suggesting":[227],"these":[228],"play":[230],"role":[233,291],"ligand":[235],"binding.":[236],"does":[239],"not":[240],"aim":[241],"propose":[243],"specific":[244],"therapeutic":[245],"hits":[246],"but":[247],"highlight":[249],"unknown":[252],"unexplored":[254],"involved":[256],"cell":[260],"invasion.":[261],"regard,":[264],"given":[265],"strong":[267],"correlation":[268],"between":[269],"distinct":[272],"approaches":[273],"used":[274],"mapping,":[276],"consider":[278],"offers":[281],"valuable":[282],"research":[286],"P21":[288],"disease.":[294]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-14T08:04:32.555800","created_date":"2025-10-10T00:00:00"}
