{"id":"https://openalex.org/W4401255931","doi":"https://doi.org/10.1021/acs.jcim.4c00895","title":"ACEGEN: Reinforcement Learning of Generative Chemical Agents for Drug Discovery","display_name":"ACEGEN: Reinforcement Learning of Generative Chemical Agents for Drug Discovery","publication_year":2024,"publication_date":"2024-08-02","ids":{"openalex":"https://openalex.org/W4401255931","doi":"https://doi.org/10.1021/acs.jcim.4c00895","pmid":"https://pubmed.ncbi.nlm.nih.gov/39092857"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.4c00895","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c00895","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1021/acs.jcim.4c00895","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020298420","display_name":"Albert Bou","orcid":"https://orcid.org/0000-0001-6027-4538"},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I2801864671","display_name":"Barcelona Biomedical Research Park","ror":"https://ror.org/05sajct49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801864671"]},{"id":"https://openalex.org/I4210153560","display_name":"Acellera (Spain)","ror":"https://ror.org/051pfzb30","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210153560"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Albert Bou","raw_affiliation_strings":["Acellera Labs, C Dr. Trueta 183, 08005, Barcelona, Spain","Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB), C Dr. Aiguader 88, 08003 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Acellera Labs, C Dr. Trueta 183, 08005, Barcelona, Spain","institution_ids":["https://openalex.org/I4210153560"]},{"raw_affiliation_string":"Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB), C Dr. Aiguader 88, 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I2801864671","https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017145385","display_name":"Morgan Thomas","orcid":null},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I2801864671","display_name":"Barcelona Biomedical Research Park","ror":"https://ror.org/05sajct49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801864671"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Morgan Thomas","raw_affiliation_strings":["Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB), C Dr. Aiguader 88, 08003 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB), C Dr. Aiguader 88, 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I2801864671","https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039096646","display_name":"Sebastian Dittert","orcid":null},"institutions":[{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I2801864671","display_name":"Barcelona Biomedical Research Park","ror":"https://ror.org/05sajct49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801864671"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Sebastian Dittert","raw_affiliation_strings":["Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB), C Dr. Aiguader 88, 08003 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB), C Dr. Aiguader 88, 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I2801864671","https://openalex.org/I170486558"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053249103","display_name":"Carles Navarro","orcid":"https://orcid.org/0009-0001-7679-6944"},"institutions":[{"id":"https://openalex.org/I4210153560","display_name":"Acellera (Spain)","ror":"https://ror.org/051pfzb30","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210153560"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Carles Navarro","raw_affiliation_strings":["Acellera Labs, C Dr. Trueta 183, 08005, Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Acellera Labs, C Dr. Trueta 183, 08005, Barcelona, Spain","institution_ids":["https://openalex.org/I4210153560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037500418","display_name":"Maciej Majewski","orcid":"https://orcid.org/0000-0003-2605-8166"},"institutions":[{"id":"https://openalex.org/I4210153560","display_name":"Acellera (Spain)","ror":"https://ror.org/051pfzb30","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210153560"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Maciej Majewski","raw_affiliation_strings":["Acellera Labs, C Dr. Trueta 183, 08005, Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Acellera Labs, C Dr. Trueta 183, 08005, Barcelona, Spain","institution_ids":["https://openalex.org/I4210153560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102922843","display_name":"Ye Wang","orcid":"https://orcid.org/0000-0001-5274-2928"},"institutions":[{"id":"https://openalex.org/I1297540436","display_name":"Biogen (United States)","ror":"https://ror.org/02jqkb192","country_code":"US","type":"company","lineage":["https://openalex.org/I1297540436"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ye Wang","raw_affiliation_strings":["Biogen Research and Development, 225 Binney Street, Cambridge, Massachusetts 02142, United States"],"affiliations":[{"raw_affiliation_string":"Biogen Research and Development, 225 Binney Street, Cambridge, Massachusetts 02142, United States","institution_ids":["https://openalex.org/I1297540436"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018805663","display_name":"Shivam Patel","orcid":"https://orcid.org/0009-0000-0178-2073"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Shivam Patel","raw_affiliation_strings":["Psivant Therapeutics, 451 D Street, Boston, Massachusetts 02210, United States"],"affiliations":[{"raw_affiliation_string":"Psivant Therapeutics, 451 D Street, Boston, Massachusetts 02210, United States","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022201149","display_name":"Gary Tresadern","orcid":"https://orcid.org/0000-0002-4801-1644"},"institutions":[{"id":"https://openalex.org/I137982388","display_name":"Janssen (Belgium)","ror":"https://ror.org/04yzcpd71","country_code":"BE","type":"company","lineage":["https://openalex.org/I1330063522","https://openalex.org/I137982388"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Gary Tresadern","raw_affiliation_strings":["In Silico Discovery, Janssen Research & Development, Janssen Pharmaceutica N. V., Turnhoutseweg 30, B-2340 Beerse, Belgium"],"affiliations":[{"raw_affiliation_string":"In Silico Discovery, Janssen Research & Development, Janssen Pharmaceutica N. V., Turnhoutseweg 30, B-2340 Beerse, Belgium","institution_ids":["https://openalex.org/I137982388"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063961921","display_name":"Mazen Ahmad","orcid":"https://orcid.org/0000-0003-4010-7227"},"institutions":[{"id":"https://openalex.org/I137982388","display_name":"Janssen (Belgium)","ror":"https://ror.org/04yzcpd71","country_code":"BE","type":"company","lineage":["https://openalex.org/I1330063522","https://openalex.org/I137982388"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Mazen Ahmad","raw_affiliation_strings":["In Silico Discovery, Janssen Research & Development, Janssen Pharmaceutica N. V., Turnhoutseweg 30, B-2340 Beerse, Belgium"],"affiliations":[{"raw_affiliation_string":"In Silico Discovery, Janssen Research & Development, Janssen Pharmaceutica N. V., Turnhoutseweg 30, B-2340 Beerse, Belgium","institution_ids":["https://openalex.org/I137982388"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015148245","display_name":"Vincent Moens","orcid":"https://orcid.org/0000-0002-5810-086X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vincent Moens","raw_affiliation_strings":["PyTorch Team, Meta, 11\u221221 Canal Reach, London, N1C 4DB, United Kingdom"],"affiliations":[{"raw_affiliation_string":"PyTorch Team, Meta, 11\u221221 Canal Reach, London, N1C 4DB, United Kingdom","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087455853","display_name":"Woody Sherman","orcid":"https://orcid.org/0000-0001-9079-1376"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Woody Sherman","raw_affiliation_strings":["Psivant Therapeutics, 451 D Street, Boston, Massachusetts 02210, United States"],"affiliations":[{"raw_affiliation_string":"Psivant Therapeutics, 451 D Street, Boston, Massachusetts 02210, United States","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036518257","display_name":"Simone Sciabola","orcid":"https://orcid.org/0000-0003-1448-3608"},"institutions":[{"id":"https://openalex.org/I1297540436","display_name":"Biogen (United States)","ror":"https://ror.org/02jqkb192","country_code":"US","type":"company","lineage":["https://openalex.org/I1297540436"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Simone Sciabola","raw_affiliation_strings":["Biogen Research and Development, 225 Binney Street, Cambridge, Massachusetts 02142, United States"],"affiliations":[{"raw_affiliation_string":"Biogen Research and Development, 225 Binney Street, Cambridge, Massachusetts 02142, United States","institution_ids":["https://openalex.org/I1297540436"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027026045","display_name":"Gianni De Fabritiis","orcid":"https://orcid.org/0000-0003-3913-4877"},"institutions":[{"id":"https://openalex.org/I11932220","display_name":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats","ror":"https://ror.org/0371hy230","country_code":"ES","type":"nonprofit","lineage":["https://openalex.org/I11932220"]},{"id":"https://openalex.org/I170486558","display_name":"Universitat Pompeu Fabra","ror":"https://ror.org/04n0g0b29","country_code":"ES","type":"education","lineage":["https://openalex.org/I170486558"]},{"id":"https://openalex.org/I2801864671","display_name":"Barcelona Biomedical Research Park","ror":"https://ror.org/05sajct49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801864671"]},{"id":"https://openalex.org/I4210153560","display_name":"Acellera (Spain)","ror":"https://ror.org/051pfzb30","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210153560"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Gianni De Fabritiis","raw_affiliation_strings":["Acellera Labs, C Dr. Trueta 183, 08005, Barcelona, Spain","Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB), C Dr. Aiguader 88, 08003 Barcelona, Spain","Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), Passeig Lluis Companys 23, 08010 Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Acellera Labs, C Dr. Trueta 183, 08005, Barcelona, Spain","institution_ids":["https://openalex.org/I4210153560"]},{"raw_affiliation_string":"Computational Science Laboratory, Universitat Pompeu Fabra, Barcelona Biomedical Research Park (PRBB), C Dr. Aiguader 88, 08003 Barcelona, Spain","institution_ids":["https://openalex.org/I2801864671","https://openalex.org/I170486558"]},{"raw_affiliation_string":"Instituci\u00f3 Catalana de Recerca i Estudis Avan\u00e7ats (ICREA), Passeig Lluis Companys 23, 08010 Barcelona, Spain","institution_ids":["https://openalex.org/I11932220"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":13,"corresponding_author_ids":["https://openalex.org/A5027026045"],"corresponding_institution_ids":["https://openalex.org/I11932220","https://openalex.org/I170486558","https://openalex.org/I2801864671","https://openalex.org/I4210153560"],"apc_list":null,"apc_paid":null,"fwci":7.7058,"has_fulltext":true,"cited_by_count":22,"citation_normalized_percentile":{"value":0.9785985,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"64","issue":"15","first_page":"5900","last_page":"5911"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9753000140190125,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9735000133514404,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/reinforcement-learning","display_name":"Reinforcement learning","score":0.8177186250686646},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7867442965507507},{"id":"https://openalex.org/keywords/generative-grammar","display_name":"Generative grammar","score":0.7289959192276001},{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.6924346685409546},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.6037098169326782},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.5879495739936829},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5203009247779846},{"id":"https://openalex.org/keywords/code","display_name":"Code (set theory)","score":0.4959741532802582},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.48107075691223145},{"id":"https://openalex.org/keywords/reliability","display_name":"Reliability (semiconductor)","score":0.4663751721382141},{"id":"https://openalex.org/keywords/license","display_name":"License","score":0.4582184851169586},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.3986983895301819},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.1889071762561798},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.18376964330673218},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.11423078179359436}],"concepts":[{"id":"https://openalex.org/C97541855","wikidata":"https://www.wikidata.org/wiki/Q830687","display_name":"Reinforcement learning","level":2,"score":0.8177186250686646},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7867442965507507},{"id":"https://openalex.org/C39890363","wikidata":"https://www.wikidata.org/wiki/Q36108","display_name":"Generative grammar","level":2,"score":0.7289959192276001},{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.6924346685409546},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.6037098169326782},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.5879495739936829},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5203009247779846},{"id":"https://openalex.org/C2776760102","wikidata":"https://www.wikidata.org/wiki/Q5139990","display_name":"Code (set theory)","level":3,"score":0.4959741532802582},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.48107075691223145},{"id":"https://openalex.org/C43214815","wikidata":"https://www.wikidata.org/wiki/Q7310987","display_name":"Reliability (semiconductor)","level":3,"score":0.4663751721382141},{"id":"https://openalex.org/C2780560020","wikidata":"https://www.wikidata.org/wiki/Q79719","display_name":"License","level":2,"score":0.4582184851169586},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.3986983895301819},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.1889071762561798},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.18376964330673218},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.11423078179359436},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C163258240","wikidata":"https://www.wikidata.org/wiki/Q25342","display_name":"Power (physics)","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015195","descriptor_name":"Drug Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1021/acs.jcim.4c00895","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c00895","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:39092857","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39092857","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11581341","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11581341","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11581341/pdf/ci4c00895.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1021/acs.jcim.4c00895","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c00895","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G831673930","display_name":null,"funder_award_id":"HBC.2021.112","funder_id":"https://openalex.org/F4320313460","funder_display_name":"Agentschap Innoveren en Ondernemen"},{"id":"https://openalex.org/G920804771","display_name":null,"funder_award_id":"R01 GM140090","funder_id":"https://openalex.org/F4320337373","funder_display_name":"Center for Information Technology"}],"funders":[{"id":"https://openalex.org/F4320313460","display_name":"Agentschap Innoveren en Ondernemen","ror":"https://ror.org/032xdry56"},{"id":"https://openalex.org/F4320327336","display_name":"Vlaamse regering","ror":null},{"id":"https://openalex.org/F4320337373","display_name":"Center for Information Technology","ror":"https://ror.org/03jh5a977"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":52,"referenced_works":["https://openalex.org/W1975147762","https://openalex.org/W1976333571","https://openalex.org/W2044444984","https://openalex.org/W2064675550","https://openalex.org/W2086757166","https://openalex.org/W2096541451","https://openalex.org/W2157331557","https://openalex.org/W2529996553","https://openalex.org/W2578240541","https://openalex.org/W2610148085","https://openalex.org/W2736601468","https://openalex.org/W2773987374","https://openalex.org/W2895677720","https://openalex.org/W2900694120","https://openalex.org/W2902812092","https://openalex.org/W2945551948","https://openalex.org/W2949891624","https://openalex.org/W2953128081","https://openalex.org/W3005353977","https://openalex.org/W3009321976","https://openalex.org/W3045928028","https://openalex.org/W3094553402","https://openalex.org/W3094686696","https://openalex.org/W3098269892","https://openalex.org/W3100751385","https://openalex.org/W3116865743","https://openalex.org/W3133989558","https://openalex.org/W3198869316","https://openalex.org/W3210833421","https://openalex.org/W3217546525","https://openalex.org/W4214717370","https://openalex.org/W4220887735","https://openalex.org/W4221164017","https://openalex.org/W4223908421","https://openalex.org/W4224861883","https://openalex.org/W4226360315","https://openalex.org/W4241811150","https://openalex.org/W4283270512","https://openalex.org/W4300861533","https://openalex.org/W4318952054","https://openalex.org/W4378715362","https://openalex.org/W4379390289","https://openalex.org/W4382766484","https://openalex.org/W4384918448","https://openalex.org/W4389326242","https://openalex.org/W4391019623","https://openalex.org/W4392518490","https://openalex.org/W4393038273","https://openalex.org/W4399175418","https://openalex.org/W4399781535","https://openalex.org/W4400320632","https://openalex.org/W4400860798"],"related_works":["https://openalex.org/W4238897586","https://openalex.org/W435179959","https://openalex.org/W2619091065","https://openalex.org/W2059640416","https://openalex.org/W1490753184","https://openalex.org/W2284465472","https://openalex.org/W2291782699","https://openalex.org/W1993948687","https://openalex.org/W2000169967","https://openalex.org/W2112883198"],"abstract_inverted_index":{"In":[0,53],"recent":[1],"years,":[2],"reinforcement":[3],"learning":[4],"(RL)":[5],"has":[6],"emerged":[7],"as":[8],"a":[9,28,59,72],"valuable":[10],"tool":[11],"in":[12,106],"drug":[13,67,108],"design,":[14,68],"offering":[15],"the":[16,40,47,122],"potential":[17],"to":[18,39],"propose":[19],"and":[20,34,46,61,93,117],"optimize":[21],"molecules":[22],"with":[23],"desired":[24],"properties.":[25],"However,":[26],"striking":[27],"balance":[29],"between":[30],"capabilities,":[31],"flexibility,":[32],"reliability,":[33],"efficiency":[35],"remains":[36],"challenging":[37],"due":[38],"complexity":[41],"of":[42,103],"advanced":[43],"RL":[44,74],"algorithms":[45,92],"significant":[48],"reliance":[49],"on":[50],"specialized":[51],"code.":[52],"this":[54],"work,":[55],"we":[56],"introduce":[57],"ACEGEN,":[58],"comprehensive":[60],"streamlined":[62],"toolkit":[63],"tailored":[64],"for":[65,119],"generative":[66,90],"built":[69],"using":[70],"TorchRL,":[71],"modern":[73],"library":[75],"that":[76],"offers":[77],"thoroughly":[78],"tested":[79],"reusable":[80],"components.":[81],"We":[82,99],"validate":[83],"ACEGEN":[84,104,112],"by":[85],"benchmarking":[86],"against":[87],"other":[88],"published":[89],"modeling":[91],"show":[94,101],"comparable":[95],"or":[96],"improved":[97],"performance.":[98],"also":[100],"examples":[102],"applied":[105],"multiple":[107],"discovery":[109],"case":[110],"studies.":[111],"is":[113],"accessible":[114],"at":[115],"https://github.com/acellera/acegen-open":[116],"available":[118],"use":[120],"under":[121],"MIT":[123],"license.":[124]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":13},{"year":2024,"cited_by_count":3}],"updated_date":"2026-04-17T18:11:37.981687","created_date":"2025-10-10T00:00:00"}
