{"id":"https://openalex.org/W4400212876","doi":"https://doi.org/10.1021/acs.jcim.4c00546","title":"CapsEnhancer: An Effective Computational Framework for Identifying Enhancers Based on Chaos Game Representation and Capsule Network","display_name":"CapsEnhancer: An Effective Computational Framework for Identifying Enhancers Based on Chaos Game Representation and Capsule Network","publication_year":2024,"publication_date":"2024-07-01","ids":{"openalex":"https://openalex.org/W4400212876","doi":"https://doi.org/10.1021/acs.jcim.4c00546","pmid":"https://pubmed.ncbi.nlm.nih.gov/38946113"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.4c00546","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c00546","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1021/acs.jcim.4c00546","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078222868","display_name":"Lantian Yao","orcid":"https://orcid.org/0000-0003-4554-6827"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lantian Yao","raw_affiliation_strings":["Kobilka Institute of Innovative Drug Discovery, School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China","School of Science and Engineering, The Chinese University of Hong Kong, Shenzhen 518172, China"],"raw_orcid":"https://orcid.org/0000-0003-4554-6827","affiliations":[{"raw_affiliation_string":"Kobilka Institute of Innovative Drug Discovery, School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"School of Science and Engineering, The Chinese University of Hong Kong, Shenzhen 518172, China","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101189636","display_name":"Peilin Xie","orcid":null},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peilin Xie","raw_affiliation_strings":["Kobilka Institute of Innovative Drug Discovery, School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kobilka Institute of Innovative Drug Discovery, School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100597582","display_name":"Jiahui Guan","orcid":"https://orcid.org/0009-0001-0584-0637"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiahui Guan","raw_affiliation_strings":["School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067453693","display_name":"Chia\u2010Ru Chung","orcid":"https://orcid.org/0000-0002-4548-7620"},"institutions":[{"id":"https://openalex.org/I22265921","display_name":"National Central University","ror":"https://ror.org/00944ve71","country_code":"TW","type":"education","lineage":["https://openalex.org/I22265921"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chia-Ru Chung","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Central University, Taoyuan 320317, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Central University, Taoyuan 320317, Taiwan","institution_ids":["https://openalex.org/I22265921"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052405188","display_name":"Yixian Huang","orcid":"https://orcid.org/0009-0004-2601-2875"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yixian Huang","raw_affiliation_strings":["School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070743854","display_name":"Yuxuan Pang","orcid":"https://orcid.org/0000-0002-6778-7034"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yuxuan Pang","raw_affiliation_strings":["Division of Health Medical Intelligence, Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Health Medical Intelligence, Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo 108-8639, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049276024","display_name":"Huacong Wu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huacong Wu","raw_affiliation_strings":["School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058640779","display_name":"Ying\u2010Chih Chiang","orcid":"https://orcid.org/0000-0002-1585-7213"},"institutions":[{"id":"https://openalex.org/I4210116924","display_name":"Chinese University of Hong Kong, Shenzhen","ror":"https://ror.org/02d5ks197","country_code":"CN","type":"education","lineage":["https://openalex.org/I177725633","https://openalex.org/I180726961","https://openalex.org/I4210116924"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ying-Chih Chiang","raw_affiliation_strings":["Kobilka Institute of Innovative Drug Discovery, School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China","School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Kobilka Institute of Innovative Drug Discovery, School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China","institution_ids":["https://openalex.org/I4210116924"]},{"raw_affiliation_string":"School of Medicine, The Chinese University of Hong Kong, Shenzhen 518172, China","institution_ids":["https://openalex.org/I4210116924"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5002567070","display_name":"Tzong-Yi Lee","orcid":"https://orcid.org/0009-0002-0283-7712"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Tzong-Yi Lee","raw_affiliation_strings":["Center for Intelligent Drug Systems and Smart Bio-devices (IDS2B), National Yang Ming Chiao Tung University, Hsinchu 300093, Taiwan","Institute of Bioinformatics and Systems Biology, National Yang Ming Chiao Tung University, Hsinchu 300093, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Intelligent Drug Systems and Smart Bio-devices (IDS2B), National Yang Ming Chiao Tung University, Hsinchu 300093, Taiwan","institution_ids":["https://openalex.org/I148366613"]},{"raw_affiliation_string":"Institute of Bioinformatics and Systems Biology, National Yang Ming Chiao Tung University, Hsinchu 300093, Taiwan","institution_ids":["https://openalex.org/I148366613"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5002567070","https://openalex.org/A5058640779"],"corresponding_institution_ids":["https://openalex.org/I148366613","https://openalex.org/I4210116924"],"apc_list":null,"apc_paid":null,"fwci":12.8933,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.98569551,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"64","issue":"14","first_page":"5725","last_page":"5736"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11147","display_name":"Misinformation and Its Impacts","score":0.951200008392334,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11147","display_name":"Misinformation and Its Impacts","score":0.951200008392334,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9362999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12391","display_name":"Artificial Immune Systems Applications","score":0.9362000226974487,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6739224195480347},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6061859130859375},{"id":"https://openalex.org/keywords/chaos","display_name":"CHAOS (operating system)","score":0.6039879322052002},{"id":"https://openalex.org/keywords/capsule","display_name":"Capsule","score":0.5559942126274109},{"id":"https://openalex.org/keywords/enhancer","display_name":"Enhancer","score":0.49345770478248596},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.42020270228385925},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.40482082962989807},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3973828852176666},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22080039978027344},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08554914593696594},{"id":"https://openalex.org/keywords/computer-security","display_name":"Computer security","score":0.05616810917854309}],"concepts":[{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6739224195480347},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6061859130859375},{"id":"https://openalex.org/C2779374083","wikidata":"https://www.wikidata.org/wiki/Q5011038","display_name":"CHAOS (operating system)","level":2,"score":0.6039879322052002},{"id":"https://openalex.org/C2778778583","wikidata":"https://www.wikidata.org/wiki/Q147768","display_name":"Capsule","level":2,"score":0.5559942126274109},{"id":"https://openalex.org/C111936080","wikidata":"https://www.wikidata.org/wiki/Q913367","display_name":"Enhancer","level":4,"score":0.49345770478248596},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.42020270228385925},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.40482082962989807},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3973828852176666},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22080039978027344},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08554914593696594},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.05616810917854309},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004742","descriptor_name":"Enhancer Elements, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017711","descriptor_name":"Nonlinear Dynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017711","descriptor_name":"Nonlinear Dynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017711","descriptor_name":"Nonlinear Dynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017711","descriptor_name":"Nonlinear Dynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017711","descriptor_name":"Nonlinear Dynamics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1021/acs.jcim.4c00546","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c00546","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:38946113","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38946113","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11267569","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11267569","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11267569/pdf/ci4c00546.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1021/acs.jcim.4c00546","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c00546","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G287154221","display_name":null,"funder_award_id":"32070659","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2883950664","display_name":null,"funder_award_id":"112-2321-B-A49-016","funder_id":"https://openalex.org/F4320331164","funder_display_name":"National Science and Technology Council"},{"id":"https://openalex.org/G3797502090","display_name":null,"funder_award_id":"320317","funder_id":"https://openalex.org/F4320323229","funder_display_name":"National Central University"},{"id":"https://openalex.org/G7024535418","display_name":null,"funder_award_id":"NHRI-EX113-11320BI","funder_id":"https://openalex.org/F4320322845","funder_display_name":"National Health Research Institutes"},{"id":"https://openalex.org/G7555832125","display_name":null,"funder_award_id":"JCYJ20230807114206014","funder_id":"https://openalex.org/F4320326705","funder_display_name":"Science, Technology and Innovation Commission of Shenzhen Municipality"},{"id":"https://openalex.org/G774430042","display_name":null,"funder_award_id":"113-2634-F-039-001","funder_id":"https://openalex.org/F4320331164","funder_display_name":"National Science and Technology Council"},{"id":"https://openalex.org/G8035235590","display_name":null,"funder_award_id":"NSTC 112-2321-B-A49-016 and 113-2634-F-039-001","funder_id":"https://openalex.org/F4320331164","funder_display_name":"National Science and Technology Council"},{"id":"https://openalex.org/G8596826850","display_name":null,"funder_award_id":"NSTC 112-2321-B-A49-016","funder_id":"https://openalex.org/F4320331164","funder_display_name":"National Science and Technology Council"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322724","display_name":"Ministry of Education, India","ror":"https://ror.org/048xjjh50"},{"id":"https://openalex.org/F4320322832","display_name":"University of Tokyo","ror":"https://ror.org/057zh3y96"},{"id":"https://openalex.org/F4320322845","display_name":"National Health Research Institutes","ror":"https://ror.org/02r6fpx29"},{"id":"https://openalex.org/F4320322942","display_name":"Chinese University of Hong Kong","ror":"https://ror.org/00t33hh48"},{"id":"https://openalex.org/F4320323229","display_name":"National Central University","ror":"https://ror.org/00944ve71"},{"id":"https://openalex.org/F4320326705","display_name":"Science, Technology and Innovation Commission of Shenzhen Municipality","ror":null},{"id":"https://openalex.org/F4320331164","display_name":"National Science and Technology Council","ror":"https://ror.org/00wnb9798"},{"id":"https://openalex.org/F4320336716","display_name":"Institute of Medical Science, University of Tokyo","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W1807324513","https://openalex.org/W1977855308","https://openalex.org/W1979556634","https://openalex.org/W1987839415","https://openalex.org/W1988294855","https://openalex.org/W2004095656","https://openalex.org/W2063815548","https://openalex.org/W2115717891","https://openalex.org/W2129103781","https://openalex.org/W2151754128","https://openalex.org/W2185201235","https://openalex.org/W2565121836","https://openalex.org/W2807186140","https://openalex.org/W2894289085","https://openalex.org/W2903682118","https://openalex.org/W2911321166","https://openalex.org/W2945038365","https://openalex.org/W2950270741","https://openalex.org/W2972528761","https://openalex.org/W2996783813","https://openalex.org/W3006565055","https://openalex.org/W3096505797","https://openalex.org/W3129125493","https://openalex.org/W3134384141","https://openalex.org/W3137565043","https://openalex.org/W3138043598","https://openalex.org/W3164264961","https://openalex.org/W3179235883","https://openalex.org/W3189760294","https://openalex.org/W3213133098","https://openalex.org/W4200111237","https://openalex.org/W4200214589","https://openalex.org/W4291302261","https://openalex.org/W4294691146","https://openalex.org/W4311772362","https://openalex.org/W4312431055","https://openalex.org/W4318477733","https://openalex.org/W4360938365","https://openalex.org/W4379380529","https://openalex.org/W4380081627","https://openalex.org/W4382631374","https://openalex.org/W4384131433","https://openalex.org/W4386747390","https://openalex.org/W4388505307","https://openalex.org/W4389079950"],"related_works":["https://openalex.org/W2113330652","https://openalex.org/W2061914098","https://openalex.org/W4393004084","https://openalex.org/W4309683845","https://openalex.org/W2118646732","https://openalex.org/W4387565139","https://openalex.org/W4389440207","https://openalex.org/W2972483091","https://openalex.org/W4378781551","https://openalex.org/W3210381562"],"abstract_inverted_index":{"Enhancers":[0],"are":[1],"a":[2,49,64,95,170],"class":[3],"of":[4,23,31,76,137,149],"noncoding":[5],"DNA,":[6],"serving":[7],"as":[8],"crucial":[9],"regulatory":[10],"elements":[11],"in":[12,28,52,115],"governing":[13],"gene":[14],"expression":[15],"by":[16,131],"binding":[17],"to":[18,86,98,153,164],"transcription":[19],"factors.":[20],"The":[21],"identification":[22,39,75,155,166],"enhancers":[24,77],"holds":[25],"paramount":[26],"importance":[27],"the":[29,74,119,124,127,146],"field":[30],"biology.":[32],"However,":[33],"traditional":[34],"experimental":[35],"methods":[36,55,130,152],"for":[37,56,73,173],"enhancer":[38,57,154,165],"demand":[40],"substantial":[41],"human":[42],"and":[43,78,93,101,121,133,139],"material":[44],"resources.":[45],"Consequently,":[46],"there":[47],"is":[48],"growing":[50],"interest":[51],"employing":[53],"computational":[54],"prediction.":[58],"In":[59,118],"this":[60,143],"study,":[61],"we":[62],"propose":[63],"two-stage":[65],"framework":[66],"based":[67],"on":[68],"deep":[69],"learning,":[70],"termed":[71],"CapsEnhancer,":[72],"their":[79],"strengths.":[80],"CapsEnhancer":[81,111],"utilizes":[82],"chaos":[83],"game":[84],"representation":[85],"encode":[87],"DNA":[88],"sequences":[89],"into":[90],"unique":[91],"images":[92],"employs":[94],"capsule":[96],"network":[97],"extract":[99],"local":[100],"global":[102],"features":[103],"from":[104],"sequence":[105,176],"\"images\".":[106],"Experimental":[107],"results":[108],"demonstrate":[109],"that":[110],"achieves":[112],"state-of-the-art":[113],"performance":[114],"both":[116],"stages.":[117],"first":[120],"second":[122],"stages,":[123],"accuracy":[125],"surpasses":[126],"previous":[128],"best":[129],"8":[132],"3.5%,":[134],"reaching":[135],"accuracies":[136],"94.5":[138],"95%,":[140],"respectively.":[141],"Notably,":[142],"study":[144],"represents":[145],"pioneering":[147],"application":[148],"computer":[150],"vision":[151],"tasks.":[156,178],"Our":[157],"work":[158],"not":[159],"only":[160],"contributes":[161],"novel":[162],"insights":[163],"but":[167],"also":[168],"provides":[169],"fresh":[171],"perspective":[172],"other":[174],"biological":[175],"analysis":[177]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
