{"id":"https://openalex.org/W4392861329","doi":"https://doi.org/10.1021/acs.jcim.4c00004","title":"Exploring Chemical Reaction Space with Machine Learning Models: Representation and Feature Perspective","display_name":"Exploring Chemical Reaction Space with Machine Learning Models: Representation and Feature Perspective","publication_year":2024,"publication_date":"2024-03-15","ids":{"openalex":"https://openalex.org/W4392861329","doi":"https://doi.org/10.1021/acs.jcim.4c00004","pmid":"https://pubmed.ncbi.nlm.nih.gov/38489239"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.4c00004","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c00004","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032151845","display_name":"Yuheng Ding","orcid":null},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuheng Ding","raw_affiliation_strings":["Department of Pharmaceutical Science, Peking University, Beijing 100191, China"],"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Science, Peking University, Beijing 100191, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040421521","display_name":"Bo Qiang","orcid":"https://orcid.org/0000-0001-7428-4104"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bo Qiang","raw_affiliation_strings":["Department of Pharmaceutical Science, Peking University, Beijing 100191, China"],"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Science, Peking University, Beijing 100191, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050062866","display_name":"Qixuan Chen","orcid":"https://orcid.org/0000-0002-4199-1766"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qixuan Chen","raw_affiliation_strings":["Department of Pharmaceutical Science, Peking University, Beijing 100191, China"],"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Science, Peking University, Beijing 100191, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064649257","display_name":"Yiqiao Liu","orcid":"https://orcid.org/0000-0003-1071-5475"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yiqiao Liu","raw_affiliation_strings":["Department of Pharmaceutical Science, Peking University, Beijing 100191, China"],"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Science, Peking University, Beijing 100191, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089487649","display_name":"Liangren Zhang","orcid":"https://orcid.org/0000-0002-7362-9497"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liangren Zhang","raw_affiliation_strings":["Department of Pharmaceutical Science, Peking University, Beijing 100191, China"],"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Science, Peking University, Beijing 100191, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049692186","display_name":"Zhenming Liu","orcid":"https://orcid.org/0000-0002-8993-4015"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhenming Liu","raw_affiliation_strings":["Department of Pharmaceutical Science, Peking University, Beijing 100191, China"],"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Science, Peking University, Beijing 100191, China","institution_ids":["https://openalex.org/I20231570"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5049692186"],"corresponding_institution_ids":["https://openalex.org/I20231570"],"apc_list":null,"apc_paid":null,"fwci":2.7041,"has_fulltext":false,"cited_by_count":22,"citation_normalized_percentile":{"value":0.93942671,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"64","issue":"8","first_page":"2955","last_page":"2970"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/chemical-space","display_name":"Chemical space","score":0.7279829978942871},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6742781400680542},{"id":"https://openalex.org/keywords/perspective","display_name":"Perspective (graphical)","score":0.572497546672821},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5627151131629944},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5132379531860352},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4908602833747864},{"id":"https://openalex.org/keywords/bridge","display_name":"Bridge (graph theory)","score":0.4635201394557953},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.46308809518814087},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.395523339509964},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3796164393424988},{"id":"https://openalex.org/keywords/biochemical-engineering","display_name":"Biochemical engineering","score":0.33897364139556885},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.283683717250824},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.18533676862716675},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.12837696075439453}],"concepts":[{"id":"https://openalex.org/C99726746","wikidata":"https://www.wikidata.org/wiki/Q906396","display_name":"Chemical space","level":3,"score":0.7279829978942871},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6742781400680542},{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.572497546672821},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5627151131629944},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5132379531860352},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4908602833747864},{"id":"https://openalex.org/C100776233","wikidata":"https://www.wikidata.org/wiki/Q2532492","display_name":"Bridge (graph theory)","level":2,"score":0.4635201394557953},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.46308809518814087},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.395523339509964},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3796164393424988},{"id":"https://openalex.org/C183696295","wikidata":"https://www.wikidata.org/wiki/Q2487696","display_name":"Biochemical engineering","level":1,"score":0.33897364139556885},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.283683717250824},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.18533676862716675},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.12837696075439453},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008956","descriptor_name":"Models, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1021/acs.jcim.4c00004","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.4c00004","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:38489239","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38489239","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G182752003","display_name":null,"funder_award_id":"2022YFF1203003","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G5699546086","display_name":null,"funder_award_id":"KF-202304","funder_id":"https://openalex.org/F4320326896","funder_display_name":"State Key Laboratory of Pharmaceutical Biotechnology"},{"id":"https://openalex.org/G5901606499","display_name":null,"funder_award_id":"2022YFC2303700","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320326896","display_name":"State Key Laboratory of Pharmaceutical Biotechnology","ror":null},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":200,"referenced_works":["https://openalex.org/W626309183","https://openalex.org/W1534728739","https://openalex.org/W1583837637","https://openalex.org/W1614298861","https://openalex.org/W1833572148","https://openalex.org/W1965237409","https://openalex.org/W1965269139","https://openalex.org/W1968422171","https://openalex.org/W1973166400","https://openalex.org/W1975565312","https://openalex.org/W1980867644","https://openalex.org/W1983478747","https://openalex.org/W1984244097","https://openalex.org/W1984631657","https://openalex.org/W1988037271","https://openalex.org/W1998299443","https://openalex.org/W2001496974","https://openalex.org/W2005084606","https://openalex.org/W2016979469","https://openalex.org/W2020026562","https://openalex.org/W2021574925","https://openalex.org/W2021748110","https://openalex.org/W2029346257","https://openalex.org/W2031372687","https://openalex.org/W2038702914","https://openalex.org/W2055006847","https://openalex.org/W2058915630","https://openalex.org/W2060586571","https://openalex.org/W2066412916","https://openalex.org/W2066980661","https://openalex.org/W2072550304","https://openalex.org/W2075484259","https://openalex.org/W2075894968","https://openalex.org/W2115209189","https://openalex.org/W2116341502","https://openalex.org/W2126316555","https://openalex.org/W2130029082","https://openalex.org/W2143198425","https://openalex.org/W2194775991","https://openalex.org/W2200017991","https://openalex.org/W2277091242","https://openalex.org/W2333852733","https://openalex.org/W2419390430","https://openalex.org/W2462130553","https://openalex.org/W2509639622","https://openalex.org/W2551217916","https://openalex.org/W2559655401","https://openalex.org/W2571050567","https://openalex.org/W2580919858","https://openalex.org/W2593855134","https://openalex.org/W2606363443","https://openalex.org/W2612690371","https://openalex.org/W2621742623","https://openalex.org/W2747592475","https://openalex.org/W2769423117","https://openalex.org/W2785942661","https://openalex.org/W2791866670","https://openalex.org/W2799620402","https://openalex.org/W2896457183","https://openalex.org/W2897765576","https://openalex.org/W2898058922","https://openalex.org/W2901942917","https://openalex.org/W2903262661","https://openalex.org/W2910734083","https://openalex.org/W2911585371","https://openalex.org/W2919115771","https://openalex.org/W2931367569","https://openalex.org/W2934659072","https://openalex.org/W2947423323","https://openalex.org/W2947835681","https://openalex.org/W2947861305","https://openalex.org/W2950128007","https://openalex.org/W2963396480","https://openalex.org/W2969507301","https://openalex.org/W2970764640","https://openalex.org/W2972597827","https://openalex.org/W2972608805","https://openalex.org/W2991279511","https://openalex.org/W2991541823","https://openalex.org/W2992027243","https://openalex.org/W2999044305","https://openalex.org/W2999373911","https://openalex.org/W3012519883","https://openalex.org/W3013857270","https://openalex.org/W3033406728","https://openalex.org/W3034368386","https://openalex.org/W3034806393","https://openalex.org/W3041085747","https://openalex.org/W3046368065","https://openalex.org/W3082526309","https://openalex.org/W3088265803","https://openalex.org/W3088999551","https://openalex.org/W3091960941","https://openalex.org/W3094502228","https://openalex.org/W3094771832","https://openalex.org/W3095883070","https://openalex.org/W3097476496","https://openalex.org/W3098465726","https://openalex.org/W3102693939","https://openalex.org/W3103092523","https://openalex.org/W3105259638","https://openalex.org/W3111607063","https://openalex.org/W3114219454","https://openalex.org/W3115295967","https://openalex.org/W3117879109","https://openalex.org/W3118349318","https://openalex.org/W3123901912","https://openalex.org/W3127113723","https://openalex.org/W3128474010","https://openalex.org/W3137928831","https://openalex.org/W3138154797","https://openalex.org/W3143418323","https://openalex.org/W3143644407","https://openalex.org/W3146384714","https://openalex.org/W3151478830","https://openalex.org/W3155970929","https://openalex.org/W3160706794","https://openalex.org/W3165308978","https://openalex.org/W3165522846","https://openalex.org/W3166396011","https://openalex.org/W3176923149","https://openalex.org/W3177828909","https://openalex.org/W3181403764","https://openalex.org/W3189262114","https://openalex.org/W3201079074","https://openalex.org/W3201083857","https://openalex.org/W3205976514","https://openalex.org/W3206711231","https://openalex.org/W3209726219","https://openalex.org/W3209951148","https://openalex.org/W3216868281","https://openalex.org/W4205455490","https://openalex.org/W4206063340","https://openalex.org/W4206533301","https://openalex.org/W4212774754","https://openalex.org/W4213314063","https://openalex.org/W4220747243","https://openalex.org/W4220871953","https://openalex.org/W4221149941","https://openalex.org/W4221161246","https://openalex.org/W4226145240","https://openalex.org/W4226159083","https://openalex.org/W4229040393","https://openalex.org/W4238090577","https://openalex.org/W4239934460","https://openalex.org/W4248023928","https://openalex.org/W4283727985","https://openalex.org/W4286563402","https://openalex.org/W4286901673","https://openalex.org/W4287092619","https://openalex.org/W4288748489","https://openalex.org/W4290725232","https://openalex.org/W4290875097","https://openalex.org/W4293876093","https://openalex.org/W4295846611","https://openalex.org/W4295951229","https://openalex.org/W4296686673","https://openalex.org/W4297734170","https://openalex.org/W4297808394","https://openalex.org/W4299816210","https://openalex.org/W4300594415","https://openalex.org/W4302307798","https://openalex.org/W4306176360","https://openalex.org/W4306913346","https://openalex.org/W4309667870","https://openalex.org/W4309697917","https://openalex.org/W4311376455","https://openalex.org/W4312119492","https://openalex.org/W4313525580","https://openalex.org/W4316507319","https://openalex.org/W4318350716","https://openalex.org/W4323304388","https://openalex.org/W4323809648","https://openalex.org/W4324122028","https://openalex.org/W4327550249","https://openalex.org/W4367298072","https://openalex.org/W4377294458","https://openalex.org/W4379600962","https://openalex.org/W4380032848","https://openalex.org/W4380202354","https://openalex.org/W4380715275","https://openalex.org/W4380870591","https://openalex.org/W4382239643","https://openalex.org/W4382469015","https://openalex.org/W4383217278","https://openalex.org/W4385500896","https://openalex.org/W4386162412","https://openalex.org/W4386390316","https://openalex.org/W4386702940","https://openalex.org/W4387440462","https://openalex.org/W4387561029","https://openalex.org/W4388375116","https://openalex.org/W4388684893","https://openalex.org/W4389348133","https://openalex.org/W4389472086","https://openalex.org/W4389599499","https://openalex.org/W4389786948","https://openalex.org/W4389866983","https://openalex.org/W6929377222","https://openalex.org/W6966415272"],"related_works":["https://openalex.org/W2902857455","https://openalex.org/W2161782568","https://openalex.org/W4212982662","https://openalex.org/W4226062292","https://openalex.org/W4281772408","https://openalex.org/W2078293348","https://openalex.org/W4254684673","https://openalex.org/W2023175890","https://openalex.org/W1501776718","https://openalex.org/W3191713309"],"abstract_inverted_index":{"Chemical":[0],"reactions":[1],"serve":[2],"as":[3,148],"foundational":[4],"building":[5],"blocks":[6],"for":[7,34,41,100],"organic":[8],"chemistry":[9],"and":[10,37,61,95,108,117],"drug":[11],"design.":[12],"In":[13],"the":[14,26,91,96,126],"era":[15],"of":[16,28,73,83,93,98,104,110],"large":[17],"AI":[18],"models,":[19,54],"data-driven":[20],"approaches":[21],"have":[22],"emerged":[23],"to":[24,58,78,124],"innovate":[25],"design":[27,97],"novel":[29],"reactions,":[30],"optimize":[31],"existing":[32],"ones":[33],"higher":[35],"yields,":[36],"discover":[38],"new":[39,140],"pathways":[40],"synthesizing":[42],"chemical":[43,143],"structures":[44],"comprehensively.":[45],"To":[46],"effectively":[47],"address":[48],"these":[49],"challenges":[50],"with":[51],"machine":[52],"learning":[53],"it":[55],"is":[56],"imperative":[57],"derive":[59],"robust":[60],"informative":[62],"representations":[63,94,130],"or":[64],"engage":[65],"in":[66,142],"feature":[67],"engineering":[68],"using":[69],"extensive":[70],"data":[71],"sets":[72],"reactions.":[74],"This":[75],"work":[76],"aims":[77],"provide":[79],"a":[80,101,139],"comprehensive":[81],"review":[82],"established":[84],"reaction":[85,144],"featurization":[86],"approaches,":[87],"offering":[88],"insights":[89],"into":[90],"selection":[92],"features":[99],"wide":[102],"array":[103],"tasks.":[105],"The":[106],"advantages":[107],"limitations":[109],"employing":[111],"SMILES,":[112],"molecular":[113,115],"fingerprints,":[114],"graphs,":[116],"physics-based":[118],"properties":[119],"are":[120],"meticulously":[121],"elaborated.":[122],"Solutions":[123],"bridge":[125],"gap":[127],"between":[128],"different":[129],"will":[131],"also":[132],"be":[133],"critically":[134],"evaluated.":[135],"Additionally,":[136],"we":[137],"introduce":[138],"frontier":[141],"pretraining,":[145],"holding":[146],"promise":[147],"an":[149],"innovative":[150],"yet":[151],"unexplored":[152],"avenue.":[153]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":13},{"year":2024,"cited_by_count":7}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
