{"id":"https://openalex.org/W4392189885","doi":"https://doi.org/10.1021/acs.jcim.3c01919","title":"Viral RNA Replication Suppression of SARS-CoV-2: Atomistic Insights into Inhibition Mechanisms of RdRp Machinery by ddhCTP","display_name":"Viral RNA Replication Suppression of SARS-CoV-2: Atomistic Insights into Inhibition Mechanisms of RdRp Machinery by ddhCTP","publication_year":2024,"publication_date":"2024-02-27","ids":{"openalex":"https://openalex.org/W4392189885","doi":"https://doi.org/10.1021/acs.jcim.3c01919","pmid":"https://pubmed.ncbi.nlm.nih.gov/38412057"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.3c01919","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.3c01919","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5036969518","display_name":"Giada Ciardullo","orcid":"https://orcid.org/0000-0002-2290-9982"},"institutions":[{"id":"https://openalex.org/I45204951","display_name":"University of Calabria","ror":"https://ror.org/02rc97e94","country_code":"IT","type":"education","lineage":["https://openalex.org/I45204951"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giada Ciardullo","raw_affiliation_strings":["Dipartimento di Chimica E Tecnologie Chimiche, Laboratorio PROMOCS Cubo 14C, Universit\u00e0 della Calabria, RENDE (CS) I-87036, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Chimica E Tecnologie Chimiche, Laboratorio PROMOCS Cubo 14C, Universit\u00e0 della Calabria, RENDE (CS) I-87036, Italy","institution_ids":["https://openalex.org/I45204951"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026538181","display_name":"Angela Parise","orcid":"https://orcid.org/0000-0003-3281-4677"},"institutions":[{"id":"https://openalex.org/I138549579","display_name":"Scuola Internazionale Superiore di Studi Avanzati","ror":"https://ror.org/004fze387","country_code":"IT","type":"education","lineage":["https://openalex.org/I138549579"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Angela Parise","raw_affiliation_strings":["Consiglio Nazionale Delle Ricerche (CNR)-IOM C/O International School for Advanced Studies (SISSA/ISAS), Via Bonomea 265, Trieste 34136, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Consiglio Nazionale Delle Ricerche (CNR)-IOM C/O International School for Advanced Studies (SISSA/ISAS), Via Bonomea 265, Trieste 34136, Italy","institution_ids":["https://openalex.org/I138549579"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079530727","display_name":"Mario Prejan\u00f2","orcid":"https://orcid.org/0000-0002-9140-6246"},"institutions":[{"id":"https://openalex.org/I45204951","display_name":"University of Calabria","ror":"https://ror.org/02rc97e94","country_code":"IT","type":"education","lineage":["https://openalex.org/I45204951"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Mario Prejan\u00f2","raw_affiliation_strings":["Dipartimento di Chimica E Tecnologie Chimiche, Laboratorio PROMOCS Cubo 14C, Universit\u00e0 della Calabria, RENDE (CS) I-87036, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Chimica E Tecnologie Chimiche, Laboratorio PROMOCS Cubo 14C, Universit\u00e0 della Calabria, RENDE (CS) I-87036, Italy","institution_ids":["https://openalex.org/I45204951"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027556367","display_name":"Tiziana Marino","orcid":"https://orcid.org/0000-0003-2386-9078"},"institutions":[{"id":"https://openalex.org/I45204951","display_name":"University of Calabria","ror":"https://ror.org/02rc97e94","country_code":"IT","type":"education","lineage":["https://openalex.org/I45204951"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Tiziana Marino","raw_affiliation_strings":["Dipartimento di Chimica E Tecnologie Chimiche, Laboratorio PROMOCS Cubo 14C, Universit\u00e0 della Calabria, RENDE (CS) I-87036, Italy"],"raw_orcid":"https://orcid.org/0000-0003-2386-9078","affiliations":[{"raw_affiliation_string":"Dipartimento di Chimica E Tecnologie Chimiche, Laboratorio PROMOCS Cubo 14C, Universit\u00e0 della Calabria, RENDE (CS) I-87036, Italy","institution_ids":["https://openalex.org/I45204951"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5027556367","https://openalex.org/A5079530727"],"corresponding_institution_ids":["https://openalex.org/I45204951"],"apc_list":null,"apc_paid":null,"fwci":1.6204,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.82420356,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"64","issue":"5","first_page":"1593","last_page":"1604"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10878","display_name":"CRISPR and Genetic Engineering","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/replication","display_name":"Replication (statistics)","score":0.6668903231620789},{"id":"https://openalex.org/keywords/viral-replication","display_name":"Viral replication","score":0.6148660778999329},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.6055780649185181},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.5996135473251343},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.5649096965789795},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.5480010509490967},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5362846851348877},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.47505828738212585},{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.4680919945240021},{"id":"https://openalex.org/keywords/2019-20-coronavirus-outbreak","display_name":"2019-20 coronavirus outbreak","score":0.43468838930130005},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.32929527759552},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.2592402696609497},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.18569961190223694},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1323750615119934},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.11006936430931091},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.08276873826980591},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.0808345377445221}],"concepts":[{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.6668903231620789},{"id":"https://openalex.org/C140704245","wikidata":"https://www.wikidata.org/wiki/Q3933202","display_name":"Viral replication","level":3,"score":0.6148660778999329},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.6055780649185181},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.5996135473251343},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.5649096965789795},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.5480010509490967},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5362846851348877},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.47505828738212585},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.4680919945240021},{"id":"https://openalex.org/C3006700255","wikidata":"https://www.wikidata.org/wiki/Q81068910","display_name":"2019-20 coronavirus outbreak","level":3,"score":0.43468838930130005},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.32929527759552},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.2592402696609497},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18569961190223694},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1323750615119934},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.11006936430931091},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.08276873826980591},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0808345377445221},{"id":"https://openalex.org/C116675565","wikidata":"https://www.wikidata.org/wiki/Q3241045","display_name":"Outbreak","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000094405","descriptor_name":"RNA Replication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000094405","descriptor_name":"RNA Replication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000094405","descriptor_name":"RNA Replication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000094405","descriptor_name":"RNA Replication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003570","descriptor_name":"Cytidine Triphosphate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003570","descriptor_name":"Cytidine Triphosphate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003570","descriptor_name":"Cytidine Triphosphate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003570","descriptor_name":"Cytidine Triphosphate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012324","descriptor_name":"RNA-Dependent RNA Polymerase","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012324","descriptor_name":"RNA-Dependent RNA Polymerase","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012324","descriptor_name":"RNA-Dependent RNA Polymerase","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012324","descriptor_name":"RNA-Dependent RNA Polymerase","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1021/acs.jcim.3c01919","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.3c01919","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:38412057","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38412057","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7699999809265137,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320324136","display_name":"Universit\u00e0 della Calabria","ror":"https://ror.org/02rc97e94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":78,"referenced_works":["https://openalex.org/W53654760","https://openalex.org/W571489779","https://openalex.org/W1964567061","https://openalex.org/W1970549136","https://openalex.org/W1976161355","https://openalex.org/W1979401635","https://openalex.org/W1996195944","https://openalex.org/W1999327012","https://openalex.org/W2008708467","https://openalex.org/W2011215428","https://openalex.org/W2023271753","https://openalex.org/W2027561928","https://openalex.org/W2029523903","https://openalex.org/W2029667189","https://openalex.org/W2052932569","https://openalex.org/W2053607178","https://openalex.org/W2057042405","https://openalex.org/W2067174909","https://openalex.org/W2081046982","https://openalex.org/W2092157292","https://openalex.org/W2102686303","https://openalex.org/W2112032031","https://openalex.org/W2112154906","https://openalex.org/W2112850441","https://openalex.org/W2123681603","https://openalex.org/W2150697053","https://openalex.org/W2170702012","https://openalex.org/W2244208996","https://openalex.org/W2323151247","https://openalex.org/W2332712348","https://openalex.org/W2404280981","https://openalex.org/W2466434059","https://openalex.org/W2509399168","https://openalex.org/W2511523112","https://openalex.org/W2513316487","https://openalex.org/W2560432645","https://openalex.org/W2613905013","https://openalex.org/W2765686573","https://openalex.org/W2770852490","https://openalex.org/W2791815609","https://openalex.org/W2805276053","https://openalex.org/W2809660639","https://openalex.org/W2897651314","https://openalex.org/W2911869066","https://openalex.org/W2913985885","https://openalex.org/W2914796231","https://openalex.org/W2950674591","https://openalex.org/W2967265180","https://openalex.org/W3012550011","https://openalex.org/W3020358199","https://openalex.org/W3039523373","https://openalex.org/W3042238480","https://openalex.org/W3045750139","https://openalex.org/W3082489976","https://openalex.org/W3085530597","https://openalex.org/W3095556560","https://openalex.org/W3104411401","https://openalex.org/W3105144449","https://openalex.org/W3110011545","https://openalex.org/W3124227803","https://openalex.org/W3127273912","https://openalex.org/W3154608301","https://openalex.org/W3164044002","https://openalex.org/W3186956315","https://openalex.org/W3190136861","https://openalex.org/W3199901767","https://openalex.org/W3202008685","https://openalex.org/W3212329645","https://openalex.org/W4200485684","https://openalex.org/W4205108246","https://openalex.org/W4224234572","https://openalex.org/W4283265399","https://openalex.org/W4289315689","https://openalex.org/W4293817108","https://openalex.org/W4296109514","https://openalex.org/W4304204946","https://openalex.org/W4307500007","https://openalex.org/W4379876032"],"related_works":["https://openalex.org/W4200329650","https://openalex.org/W3127156785","https://openalex.org/W4205754011","https://openalex.org/W3009669391","https://openalex.org/W4205215807","https://openalex.org/W3005417802","https://openalex.org/W4226296940","https://openalex.org/W3028835529","https://openalex.org/W3036314732","https://openalex.org/W3134376730"],"abstract_inverted_index":{"The":[0,21,76,164],"nonstructural":[1],"protein":[2],"12,":[3],"known":[4],"as":[5,28,99],"RNA-dependent":[6],"RNA":[7,101],"polymerase":[8],"(RdRp),":[9],"is":[10,142],"essential":[11],"for":[12,32,148],"both":[13],"replication":[14],"and":[15,123,174],"repair":[16],"of":[17,23,38,54,83,91,116,151,156,181],"the":[18,36,39,52,55,62,72,81,84,89,95,113,120,130,135,145,149,153,170],"viral":[19,187],"genome.":[20],"RdRp":[22,64,117],"SARS-CoV-2":[24,63],"has":[25],"been":[26],"used":[27],"a":[29,68,177],"promising":[30],"candidate":[31],"drug":[33],"development":[34],"since":[35],"inception":[37],"COVID-19":[40],"spread.":[41],"In":[42],"this":[43],"work,":[44],"we":[45],"performed":[46],"an":[47,100,185],"in":[48,67,78,134,167],"silico":[49],"investigation":[50],"on":[51,112,119,183],"insertion":[53],"naturally":[56],"modified":[57],"pyrimidine":[58],"nucleobase":[59],"ddhCTP":[60,79],"into":[61,94],"active":[65],"site,":[66],"comparative":[69],"analysis":[70],"with":[71,169],"natural":[73],"one":[74],"(CTP).":[75],"modification":[77],"involves":[80],"removal":[82],"3\u2032-hydroxyl":[85],"group":[86],"that":[87],"prevents":[88],"addition":[90],"subsequent":[92],"nucleotides":[93],"nascent":[96],"strand,":[97],"acting":[98],"chain":[102],"terminator":[103],"inhibitor.":[104],"Quantum":[105],"mechanical":[106],"investigations":[107],"helped":[108],"to":[109,176],"shed":[110],"light":[111],"mechanistic":[114],"source":[115],"activity":[118],"selected":[121],"nucleobases,":[122],"comprehensive":[124,179],"all-atom":[125],"simulations":[126],"provided":[127],"insights":[128],"about":[129],"structural":[131],"rearrangements":[132],"occurring":[133],"active-site":[136],"region":[137],"when":[138],"inorganic":[139],"pyrophosphate":[140],"(PPi)":[141],"formed.":[143],"Subsequently,":[144],"intricate":[146],"pathways":[147],"release":[150],"PPi,":[152],"catalytic":[154],"product":[155],"RdRp,":[157],"were":[158],"investigated":[159],"using":[160],"Umbrella":[161],"Sampling":[162],"simulations.":[163],"results":[165],"are":[166],"line":[168],"available":[171],"experimental":[172],"data":[173],"contribute":[175],"more":[178],"point":[180],"view":[182],"such":[184],"important":[186],"enzyme.":[188]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":5}],"updated_date":"2026-06-14T06:11:07.267592","created_date":"2025-10-10T00:00:00"}
