{"id":"https://openalex.org/W4379599862","doi":"https://doi.org/10.1021/acs.jcim.3c00530","title":"Automatic Optimization of Lipid Models in the Martini Force Field Using <i>SwarmCG</i>","display_name":"Automatic Optimization of Lipid Models in the Martini Force Field Using <i>SwarmCG</i>","publication_year":2023,"publication_date":"2023-06-06","ids":{"openalex":"https://openalex.org/W4379599862","doi":"https://doi.org/10.1021/acs.jcim.3c00530","pmid":"https://pubmed.ncbi.nlm.nih.gov/37279107"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.3c00530","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.3c00530","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.3c00530","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.3c00530","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090015240","display_name":"Charly Empereur\u2010mot","orcid":"https://orcid.org/0000-0001-6972-8225"},"institutions":[{"id":"https://openalex.org/I15196421","display_name":"University of Applied Sciences and Arts of Southern Switzerland","ror":"https://ror.org/05ep8g269","country_code":"CH","type":"education","lineage":["https://openalex.org/I15196421"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Charly Empereur-mot","raw_affiliation_strings":["Department of Innovative Technologies, University of Applied Sciences and Arts of Southern Switzerland, Polo Universitario Lugano, Campus Est, Via la Santa 1, 6962 Lugano-Viganello, Switzerland"],"raw_orcid":"https://orcid.org/0000-0001-6972-8225","affiliations":[{"raw_affiliation_string":"Department of Innovative Technologies, University of Applied Sciences and Arts of Southern Switzerland, Polo Universitario Lugano, Campus Est, Via la Santa 1, 6962 Lugano-Viganello, Switzerland","institution_ids":["https://openalex.org/I15196421"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062842314","display_name":"Kasper B. Pedersen","orcid":"https://orcid.org/0000-0002-7876-0435"},"institutions":[{"id":"https://openalex.org/I204337017","display_name":"Aarhus University","ror":"https://ror.org/01aj84f44","country_code":"DK","type":"education","lineage":["https://openalex.org/I204337017"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Kasper B. Pedersen","raw_affiliation_strings":["Department of Chemistry, Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Chemistry, Aarhus University, Langelandsgade 140, 8000 Aarhus C, Denmark","institution_ids":["https://openalex.org/I204337017"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041625800","display_name":"Riccardo Capelli","orcid":"https://orcid.org/0000-0001-9522-3132"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Riccardo Capelli","raw_affiliation_strings":["Department of Biosciences, Universit\u00e0 degli Studi di Milano, Via Celoria 26, 20133 Milano, Italy"],"raw_orcid":"https://orcid.org/0000-0001-9522-3132","affiliations":[{"raw_affiliation_string":"Department of Biosciences, Universit\u00e0 degli Studi di Milano, Via Celoria 26, 20133 Milano, Italy","institution_ids":["https://openalex.org/I189158943"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043085394","display_name":"Martina Crippa","orcid":"https://orcid.org/0000-0002-6682-0015"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Politecnico di Torino","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Martina Crippa","raw_affiliation_strings":["Politecnico di Torino, Department of Applied Science and Technology, Corso Duca degli Abruzzi 24, 10129 Torino, Italy"],"raw_orcid":"https://orcid.org/0000-0002-6682-0015","affiliations":[{"raw_affiliation_string":"Politecnico di Torino, Department of Applied Science and Technology, Corso Duca degli Abruzzi 24, 10129 Torino, Italy","institution_ids":["https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003528221","display_name":"Cristina Caruso","orcid":null},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Politecnico di Torino","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Cristina Caruso","raw_affiliation_strings":["Politecnico di Torino, Department of Applied Science and Technology, Corso Duca degli Abruzzi 24, 10129 Torino, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Politecnico di Torino, Department of Applied Science and Technology, Corso Duca degli Abruzzi 24, 10129 Torino, Italy","institution_ids":["https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034537273","display_name":"Mattia Perrone","orcid":"https://orcid.org/0000-0001-7062-4984"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Politecnico di Torino","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Mattia Perrone","raw_affiliation_strings":["Politecnico di Torino, Department of Applied Science and Technology, Corso Duca degli Abruzzi 24, 10129 Torino, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Politecnico di Torino, Department of Applied Science and Technology, Corso Duca degli Abruzzi 24, 10129 Torino, Italy","institution_ids":["https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017675228","display_name":"Paulo C. T. Souza","orcid":"https://orcid.org/0000-0003-0660-1301"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Paulo C. T. Souza","raw_affiliation_strings":["Molecular Microbiology and Structural Biochemistry (MMSB, UMR 5086), CNRS & University of Lyon, 7 Passage du Vercors, 69007 Lyon, France"],"raw_orcid":"https://orcid.org/0000-0003-0660-1301","affiliations":[{"raw_affiliation_string":"Molecular Microbiology and Structural Biochemistry (MMSB, UMR 5086), CNRS & University of Lyon, 7 Passage du Vercors, 69007 Lyon, France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062095380","display_name":"\u202aSiewert J. Marrink","orcid":null},"institutions":[{"id":"https://openalex.org/I169381384","display_name":"University of Groningen","ror":"https://ror.org/012p63287","country_code":"NL","type":"education","lineage":["https://openalex.org/I169381384"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Siewert J. Marrink","raw_affiliation_strings":["Molecular Dynamics, Groningen Biomolecular Sciences and Biotechnology Institute (GBB), University of Groningen, Nijenborgh 7, 9747 AG Groningen, The Netherlands"],"raw_orcid":"https://orcid.org/0000-0001-8423-5277","affiliations":[{"raw_affiliation_string":"Molecular Dynamics, Groningen Biomolecular Sciences and Biotechnology Institute (GBB), University of Groningen, Nijenborgh 7, 9747 AG Groningen, The Netherlands","institution_ids":["https://openalex.org/I169381384"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061158708","display_name":"Giovanni M. Pavan","orcid":"https://orcid.org/0000-0002-3473-8471"},"institutions":[{"id":"https://openalex.org/I15196421","display_name":"University of Applied Sciences and Arts of Southern Switzerland","ror":"https://ror.org/05ep8g269","country_code":"CH","type":"education","lineage":["https://openalex.org/I15196421"]},{"id":"https://openalex.org/I177477856","display_name":"Politecnico di Torino","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["CH","IT"],"is_corresponding":true,"raw_author_name":"Giovanni M. Pavan","raw_affiliation_strings":["Department of Innovative Technologies, University of Applied Sciences and Arts of Southern Switzerland, Polo Universitario Lugano, Campus Est, Via la Santa 1, 6962 Lugano-Viganello, Switzerland","Politecnico di Torino, Department of Applied Science and Technology, Corso Duca degli Abruzzi 24, 10129 Torino, Italy"],"raw_orcid":"https://orcid.org/0000-0002-3473-8471","affiliations":[{"raw_affiliation_string":"Department of Innovative Technologies, University of Applied Sciences and Arts of Southern Switzerland, Polo Universitario Lugano, Campus Est, Via la Santa 1, 6962 Lugano-Viganello, Switzerland","institution_ids":["https://openalex.org/I15196421"]},{"raw_affiliation_string":"Politecnico di Torino, Department of Applied Science and Technology, Corso Duca degli Abruzzi 24, 10129 Torino, Italy","institution_ids":["https://openalex.org/I177477856"]}]}],"institutions":[],"countries_distinct_count":5,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5061158708","https://openalex.org/A5090015240"],"corresponding_institution_ids":["https://openalex.org/I15196421","https://openalex.org/I177477856"],"apc_list":null,"apc_paid":null,"fwci":5.329,"has_fulltext":false,"cited_by_count":36,"citation_normalized_percentile":{"value":0.96257293,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"63","issue":"12","first_page":"3827","last_page":"3838"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11844","display_name":"Lipid metabolism and biosynthesis","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1303","display_name":"Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/force-field","display_name":"Force field (fiction)","score":0.5870225429534912},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5299915671348572},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.36336469650268555},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.340387761592865},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24317702651023865},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20353665947914124},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2000199854373932}],"concepts":[{"id":"https://openalex.org/C10803110","wikidata":"https://www.wikidata.org/wiki/Q1341441","display_name":"Force field (fiction)","level":2,"score":0.5870225429534912},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5299915671348572},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.36336469650268555},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.340387761592865},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24317702651023865},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20353665947914124},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2000199854373932},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008051","descriptor_name":"Lipid Bilayers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D008051","descriptor_name":"Lipid Bilayers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D008051","descriptor_name":"Lipid Bilayers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D008051","descriptor_name":"Lipid Bilayers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010713","descriptor_name":"Phosphatidylcholines","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010713","descriptor_name":"Phosphatidylcholines","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010713","descriptor_name":"Phosphatidylcholines","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010713","descriptor_name":"Phosphatidylcholines","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013696","descriptor_name":"Temperature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":11,"locations":[{"id":"doi:10.1021/acs.jcim.3c00530","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.3c00530","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.3c00530","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:37279107","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37279107","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:pure.rug.nl:openaire/dd2f6b75-82cc-4777-afdc-414d1d59f035","is_oa":true,"landing_page_url":"https://research.rug.nl/en/publications/dd2f6b75-82cc-4777-afdc-414d1d59f035","pdf_url":null,"source":{"id":"https://openalex.org/S4306400420","display_name":"University of Groningen research database (University of Groningen / Centre for Information Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I169381384","host_organization_name":"University of Groningen","host_organization_lineage":["https://openalex.org/I169381384"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Empereur-Mot, C, Pedersen, K B, Capelli, R, Crippa, M, Caruso, C, Perrone, M, Souza, P C T, Marrink, S J & Pavan, G M 2023, 'Automatic Optimization of Lipid Models in the Martini Force Field Using SwarmCG.', Journal of Chemical Information and Modeling, vol. 63, no. 12, pp. 3827\u20133838. https://doi.org/10.1021/acs.jcim.3c00530","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pubmedcentral.nih.gov:10302490","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10302490","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10302490/pdf/ci3c00530.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"},{"id":"pmh:oai:HAL:hal-04296720v1","is_oa":true,"landing_page_url":"https://hal.science/hal-04296720","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Chemical Information and Modeling, 2023, 63 (12), pp.3827-3838. &#x27E8;10.1021/acs.jcim.3c00530&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:air.unimi.it:2434/980032","is_oa":true,"landing_page_url":"https://hdl.handle.net/2434/980032","pdf_url":null,"source":{"id":"https://openalex.org/S4306400516","display_name":"Archivio Istituzionale della Ricerca (Universita Degli Studi Di Milano)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I189158943","host_organization_name":"University of Milan","host_organization_lineage":["https://openalex.org/I189158943"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:iris.uniroma1.it:11573/1750443","is_oa":true,"landing_page_url":"https://hdl.handle.net/11573/1750443","pdf_url":null,"source":{"id":"https://openalex.org/S4377196107","display_name":"IRIS Research product catalog (Sapienza University of Rome)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pure.atira.dk:openaire/975a69b6-43c6-4b4e-85eb-c56f8b745fdf","is_oa":true,"landing_page_url":"https://pure.au.dk/ws/files/417357318/empereur-mot-et-al-2023-automatic-optimization-of-lipid-models-in-the-martini-force-field-using-swarmcg.pdf","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Empereur-mot, C, Pedersen, K B, Capelli, R, Crippa, M, Caruso, C, Perrone, M, Souza, P C T, Marrink, S J & Pavan, G M 2023, 'Automatic Optimization of Lipid Models in the Martini Force Field Using SwarmCG', Journal of Chemical Information and Modeling, vol. 63, no. 12, pp. 3827\u20133838. https://doi.org/10.1021/acs.jcim.3c00530","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pure.atira.dk:publications/975a69b6-43c6-4b4e-85eb-c56f8b745fdf","is_oa":true,"landing_page_url":"https://pure.au.dk/portal/en/publications/975a69b6-43c6-4b4e-85eb-c56f8b745fdf","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Empereur-mot, C, Pedersen, K B, Capelli, R, Crippa, M, Caruso, C, Perrone, M, Souza, P C T, Marrink, S J & Pavan, G M 2023, 'Automatic Optimization of Lipid Models in the Martini Force Field Using SwarmCG', Journal of Chemical Information and Modeling, vol. 63, no. 12, pp. 3827\u20133838. https://doi.org/10.1021/acs.jcim.3c00530","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pure.rug.nl:openaire_cris_publications/dd2f6b75-82cc-4777-afdc-414d1d59f035","is_oa":true,"landing_page_url":"https://research.rug.nl/files/735716967/acs.jcim.3c00530.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400420","display_name":"University of Groningen research database (University of Groningen / Centre for Information Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I169381384","host_organization_name":"University of Groningen","host_organization_lineage":["https://openalex.org/I169381384"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Empereur-Mot, C, Pedersen, K B, Capelli, R, Crippa, M, Caruso, C, Perrone, M, Souza, P C T, Marrink, S J & Pavan, G M 2023, 'Automatic Optimization of Lipid Models in the Martini Force Field Using SwarmCG.', Journal of Chemical Information and Modeling, vol. 63, no. 12, pp. 3827\u20133838. https://doi.org/10.1021/acs.jcim.3c00530","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:pure.rug.nl:publications/dd2f6b75-82cc-4777-afdc-414d1d59f035","is_oa":true,"landing_page_url":"https://hdl.handle.net/11370/dd2f6b75-82cc-4777-afdc-414d1d59f035","pdf_url":null,"source":{"id":"https://openalex.org/S4306400420","display_name":"University of Groningen research database (University of Groningen / Centre for Information Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I169381384","host_organization_name":"University of Groningen","host_organization_lineage":["https://openalex.org/I169381384"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Empereur-Mot, C, Pedersen, K B, Capelli, R, Crippa, M, Caruso, C, Perrone, M, Souza, P C T, Marrink, S J & Pavan, G M 2023, 'Automatic Optimization of Lipid Models in the Martini Force Field Using SwarmCG.', Journal of Chemical Information and Modeling, vol. 63, no. 12, pp. 3827\u20133838. https://doi.org/10.1021/acs.jcim.3c00530","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":{"id":"doi:10.1021/acs.jcim.3c00530","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.3c00530","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.3c00530","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2450562244","display_name":null,"funder_award_id":"IZLIZ2_183336","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G3691638365","display_name":null,"funder_award_id":"NNF18OC0032608","funder_id":"https://openalex.org/F4320325957","funder_display_name":"Novo Nordisk Fonden"},{"id":"https://openalex.org/G5106143099","display_name":null,"funder_award_id":"101053661","funder_id":"https://openalex.org/F4320338335","funder_display_name":"H2020 European Research Council"},{"id":"https://openalex.org/G5777614701","display_name":"Modeling approaches toward bioinspired dynamic materials","funder_award_id":"818776","funder_id":"https://openalex.org/F4320338335","funder_display_name":"H2020 European Research Council"},{"id":"https://openalex.org/G7814045446","display_name":null,"funder_award_id":"0136-00148B","funder_id":"https://openalex.org/F4320310484","funder_display_name":"Teknologi og Produktion, Det Frie Forskningsr\u00e5d"},{"id":"https://openalex.org/G8337193207","display_name":"A KEY TO THE RATIONAL DESIGN OF EXTRACELLULAR VESICLES-MIMICKING NANOPARTICLES","funder_award_id":"964386","funder_id":"https://openalex.org/F4320338336","funder_display_name":"H2020 Future and Emerging Technologies"}],"funders":[{"id":"https://openalex.org/F4320310484","display_name":"Teknologi og Produktion, Det Frie Forskningsr\u00e5d","ror":"https://ror.org/03ge1nb22"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320325957","display_name":"Novo Nordisk Fonden","ror":"https://ror.org/04txyc737"},{"id":"https://openalex.org/F4320338335","display_name":"H2020 European Research Council","ror":"https://ror.org/0472cxd90"},{"id":"https://openalex.org/F4320338336","display_name":"H2020 Future and Emerging Technologies","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4379599862.pdf","grobid_xml":"https://content.openalex.org/works/W4379599862.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1559169059","https://openalex.org/W2049286183","https://openalex.org/W2057653477","https://openalex.org/W2060872117","https://openalex.org/W2086097025","https://openalex.org/W2116493166","https://openalex.org/W2119267663","https://openalex.org/W2143668817","https://openalex.org/W2145847261","https://openalex.org/W2539033431","https://openalex.org/W2613860781","https://openalex.org/W2751846886","https://openalex.org/W2762193974","https://openalex.org/W2766363993","https://openalex.org/W2790442679","https://openalex.org/W2796986051","https://openalex.org/W2802326368","https://openalex.org/W2893305701","https://openalex.org/W2912301032","https://openalex.org/W2990099050","https://openalex.org/W3005854306","https://openalex.org/W3005903109","https://openalex.org/W3041271009","https://openalex.org/W3044938537","https://openalex.org/W3101025102","https://openalex.org/W3111570204","https://openalex.org/W3122778347","https://openalex.org/W3148042916","https://openalex.org/W3164686629","https://openalex.org/W3214119158","https://openalex.org/W4200279410","https://openalex.org/W4205688077","https://openalex.org/W4233762729","https://openalex.org/W4283464776","https://openalex.org/W4294891977","https://openalex.org/W4312225830","https://openalex.org/W4317104064","https://openalex.org/W4323038710","https://openalex.org/W4384820015"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2899084033","https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W4391913857","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{",":[0],"may":[1],"be":[2],"very":[3],"useful":[4],"to":[5],"this":[6],"end.":[7]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":13},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":8}],"updated_date":"2026-05-07T13:39:58.223016","created_date":"2023-06-08T00:00:00"}