{"id":"https://openalex.org/W4380083000","doi":"https://doi.org/10.1021/acs.jcim.3c00132","title":"Large-Scale Modeling of Sparse Protein Kinase Activity Data","display_name":"Large-Scale Modeling of Sparse Protein Kinase Activity Data","publication_year":2023,"publication_date":"2023-06-09","ids":{"openalex":"https://openalex.org/W4380083000","doi":"https://doi.org/10.1021/acs.jcim.3c00132","pmid":"https://pubmed.ncbi.nlm.nih.gov/37294674"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.3c00132","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.3c00132","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.3c00132","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.3c00132","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008972636","display_name":"Sohvi Luukkonen","orcid":"https://orcid.org/0000-0001-9387-1427"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]},{"id":"https://openalex.org/I4210133171","display_name":"Centre for Human Drug Research","ror":"https://ror.org/044hshx49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I4210133171"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Sohvi Luukkonen","raw_affiliation_strings":["Leiden Academic Centre of Drug Research, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands"],"raw_orcid":"https://orcid.org/0000-0001-9387-1427","affiliations":[{"raw_affiliation_string":"Leiden Academic Centre of Drug Research, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands","institution_ids":["https://openalex.org/I4210133171","https://openalex.org/I121797337"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103175875","display_name":"Erik Meijer","orcid":"https://orcid.org/0000-0002-4238-5098"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]},{"id":"https://openalex.org/I4210133171","display_name":"Centre for Human Drug Research","ror":"https://ror.org/044hshx49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I4210133171"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Erik Meijer","raw_affiliation_strings":["Leiden Academic Centre of Drug Research, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Leiden Academic Centre of Drug Research, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands","institution_ids":["https://openalex.org/I4210133171","https://openalex.org/I121797337"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002961218","display_name":"Giovanni Tricarico","orcid":"https://orcid.org/0000-0002-5811-7207"},"institutions":[{"id":"https://openalex.org/I85459889","display_name":"Galapagos (Belgium)","ror":"https://ror.org/04e4j5d46","country_code":"BE","type":"company","lineage":["https://openalex.org/I85459889"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Giovanni A. Tricarico","raw_affiliation_strings":["Galapagos NV, Generaal De Wittelaan L11 A3, 2800 Mechelen, Belgium"],"raw_orcid":"https://orcid.org/0000-0002-5811-7207","affiliations":[{"raw_affiliation_string":"Galapagos NV, Generaal De Wittelaan L11 A3, 2800 Mechelen, Belgium","institution_ids":["https://openalex.org/I85459889"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012625840","display_name":"Johan Hofmans","orcid":"https://orcid.org/0000-0002-2420-744X"},"institutions":[{"id":"https://openalex.org/I85459889","display_name":"Galapagos (Belgium)","ror":"https://ror.org/04e4j5d46","country_code":"BE","type":"company","lineage":["https://openalex.org/I85459889"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Johan Hofmans","raw_affiliation_strings":["Galapagos NV, Generaal De Wittelaan L11 A3, 2800 Mechelen, Belgium"],"raw_orcid":"https://orcid.org/0000-0002-2420-744X","affiliations":[{"raw_affiliation_string":"Galapagos NV, Generaal De Wittelaan L11 A3, 2800 Mechelen, Belgium","institution_ids":["https://openalex.org/I85459889"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080879196","display_name":"Pieter F. W. Stouten","orcid":"https://orcid.org/0000-0002-5203-2202"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]},{"id":"https://openalex.org/I4210133171","display_name":"Centre for Human Drug Research","ror":"https://ror.org/044hshx49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I4210133171"]},{"id":"https://openalex.org/I85459889","display_name":"Galapagos (Belgium)","ror":"https://ror.org/04e4j5d46","country_code":"BE","type":"company","lineage":["https://openalex.org/I85459889"]}],"countries":["BE","NL"],"is_corresponding":false,"raw_author_name":"Pieter F. W. Stouten","raw_affiliation_strings":["Galapagos NV, Generaal De Wittelaan L11 A3, 2800 Mechelen, Belgium","Leiden Academic Centre of Drug Research, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands","Stouten Pharma Consultancy BV, Kempenarestraat 47, 2860 Sint-Katelijne-Waver, Belgium"],"raw_orcid":"https://orcid.org/0000-0002-5203-2202","affiliations":[{"raw_affiliation_string":"Galapagos NV, Generaal De Wittelaan L11 A3, 2800 Mechelen, Belgium","institution_ids":["https://openalex.org/I85459889"]},{"raw_affiliation_string":"Leiden Academic Centre of Drug Research, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands","institution_ids":["https://openalex.org/I4210133171","https://openalex.org/I121797337"]},{"raw_affiliation_string":"Stouten Pharma Consultancy BV, Kempenarestraat 47, 2860 Sint-Katelijne-Waver, Belgium","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088996741","display_name":"Gerard J. P. van Westen","orcid":"https://orcid.org/0000-0003-0717-1817"},"institutions":[{"id":"https://openalex.org/I121797337","display_name":"Leiden University","ror":"https://ror.org/027bh9e22","country_code":"NL","type":"education","lineage":["https://openalex.org/I121797337"]},{"id":"https://openalex.org/I4210133171","display_name":"Centre for Human Drug Research","ror":"https://ror.org/044hshx49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I4210133171"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Gerard J. P. van Westen","raw_affiliation_strings":["Leiden Academic Centre of Drug Research, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands"],"raw_orcid":"https://orcid.org/0000-0003-0717-1817","affiliations":[{"raw_affiliation_string":"Leiden Academic Centre of Drug Research, Leiden University, Einsteinweg 55, 2333 CC Leiden, The Netherlands","institution_ids":["https://openalex.org/I4210133171","https://openalex.org/I121797337"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059420065","display_name":"Eelke B. Lenselink","orcid":"https://orcid.org/0000-0001-5459-2978"},"institutions":[{"id":"https://openalex.org/I85459889","display_name":"Galapagos (Belgium)","ror":"https://ror.org/04e4j5d46","country_code":"BE","type":"company","lineage":["https://openalex.org/I85459889"]}],"countries":["BE"],"is_corresponding":true,"raw_author_name":"Eelke B. Lenselink","raw_affiliation_strings":["Galapagos NV, Generaal De Wittelaan L11 A3, 2800 Mechelen, Belgium"],"raw_orcid":"https://orcid.org/0000-0001-5459-2978","affiliations":[{"raw_affiliation_string":"Galapagos NV, Generaal De Wittelaan L11 A3, 2800 Mechelen, Belgium","institution_ids":["https://openalex.org/I85459889"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5008972636","https://openalex.org/A5059420065"],"corresponding_institution_ids":["https://openalex.org/I121797337","https://openalex.org/I4210133171","https://openalex.org/I85459889"],"apc_list":null,"apc_paid":null,"fwci":3.0821,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.92896903,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"63","issue":"12","first_page":"3688","last_page":"3696"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9925000071525574,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6668992042541504},{"id":"https://openalex.org/keywords/multi-task-learning","display_name":"Multi-task learning","score":0.5771914124488831},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5281650424003601},{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.4874291718006134},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4786180853843689},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.46624770760536194},{"id":"https://openalex.org/keywords/generalizability-theory","display_name":"Generalizability theory","score":0.43796810507774353},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.42752814292907715},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4076705276966095},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.38122743368148804},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.35065174102783203},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18653005361557007},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09204289317131042},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08885449171066284}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6668992042541504},{"id":"https://openalex.org/C28006648","wikidata":"https://www.wikidata.org/wiki/Q6934509","display_name":"Multi-task learning","level":3,"score":0.5771914124488831},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5281650424003601},{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.4874291718006134},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4786180853843689},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.46624770760536194},{"id":"https://openalex.org/C27158222","wikidata":"https://www.wikidata.org/wiki/Q5532422","display_name":"Generalizability theory","level":2,"score":0.43796810507774353},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.42752814292907715},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4076705276966095},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.38122743368148804},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.35065174102783203},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18653005361557007},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09204289317131042},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08885449171066284},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011494","descriptor_name":"Protein Kinases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011494","descriptor_name":"Protein Kinases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011494","descriptor_name":"Protein Kinases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1021/acs.jcim.3c00132","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.3c00132","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.3c00132","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:37294674","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37294674","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10302492","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10302492","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10302492/pdf/ci3c00132.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"},{"id":"pmh:oai:scholarlypublications.universiteitleiden.nl:item_3626637","is_oa":true,"landing_page_url":"https://hdl.handle.net/1887/3626637","pdf_url":"https://scholarlypublications.universiteitleiden.nl/access/item%3A3629693/view","source":{"id":"https://openalex.org/S4306400850","display_name":"Leiden Repository (Leiden University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I121797337","host_organization_name":"Leiden University","host_organization_lineage":["https://openalex.org/I121797337"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"Article / Letter to editor"},{"id":"pmh:ul:oai:scholarlypublications.universiteitleiden.nl:item_3626637","is_oa":true,"landing_page_url":"http://hdl.handle.net/1887/3626637","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1021/acs.jcim.3c00132","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.3c00132","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.3c00132","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G422145971","display_name":null,"funder_award_id":"ENPPS.LIFT.019.010","funder_id":"https://openalex.org/F4320321800","funder_display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek"}],"funders":[{"id":"https://openalex.org/F4320321800","display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","ror":"https://ror.org/04jsz6e67"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4380083000.pdf","grobid_xml":"https://content.openalex.org/works/W4380083000.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W1918079945","https://openalex.org/W1988337892","https://openalex.org/W1994447976","https://openalex.org/W1997533142","https://openalex.org/W1997835441","https://openalex.org/W2002731849","https://openalex.org/W2006436808","https://openalex.org/W2019678805","https://openalex.org/W2030205108","https://openalex.org/W2035585923","https://openalex.org/W2048411595","https://openalex.org/W2103979765","https://openalex.org/W2152155828","https://openalex.org/W2273267066","https://openalex.org/W2295598076","https://openalex.org/W2432967145","https://openalex.org/W2464597724","https://openalex.org/W2494869284","https://openalex.org/W2556851635","https://openalex.org/W2714724074","https://openalex.org/W2740946158","https://openalex.org/W2772089072","https://openalex.org/W2803318906","https://openalex.org/W2804509374","https://openalex.org/W2909063104","https://openalex.org/W2913930293","https://openalex.org/W2949676527","https://openalex.org/W2955443275","https://openalex.org/W2966357564","https://openalex.org/W2998628971","https://openalex.org/W2999905431","https://openalex.org/W3014594638","https://openalex.org/W3023042104","https://openalex.org/W3039548502","https://openalex.org/W3087418839","https://openalex.org/W3161074857","https://openalex.org/W3164680581","https://openalex.org/W4200306039","https://openalex.org/W4226471803","https://openalex.org/W4231101093","https://openalex.org/W4281295621","https://openalex.org/W4281671019","https://openalex.org/W4307055577","https://openalex.org/W4313597804"],"related_works":["https://openalex.org/W4238897586","https://openalex.org/W435179959","https://openalex.org/W2619091065","https://openalex.org/W2059640416","https://openalex.org/W1490753184","https://openalex.org/W2284465472","https://openalex.org/W2291782699","https://openalex.org/W1993948687","https://openalex.org/W2000169967","https://openalex.org/W4399363378"],"abstract_inverted_index":{"Protein":[0,23],"kinases":[1,24],"are":[2,94],"a":[3,70,118,134,151],"protein":[4,74,152,181],"family":[5],"that":[6,212,233],"plays":[7],"an":[8],"important":[9],"role":[10],"in":[11,62,78,86],"several":[12],"complex":[13],"diseases":[14],"such":[15],"as":[16],"cancer":[17],"and":[18,20,141,166,179,227],"cardiovascular":[19],"immunological":[21],"diseases.":[22],"have":[25],"conserved":[26],"ATP":[27],"binding":[28],"sites,":[29],"which":[30,82],"when":[31],"targeted":[32],"can":[33,44,83,106,174],"lead":[34],"to":[35,47,64,96],"similar":[36,58],"activities":[37,116],"of":[38,57,73,101,120,125,157,207,241],"inhibitors":[39],"against":[40,117],"different":[41,88],"kinases.":[42],"This":[43,171],"be":[45,84,175],"exploited":[46],"create":[48],"multitarget":[49],"drugs.":[50],"On":[51],"the":[52,79,187,190,239],"other":[53],"hand,":[54],"selectivity":[55],"(lack":[56],"activities)":[59],"is":[60,69,194],"desirable":[61],"order":[63],"avoid":[65],"toxicity":[66],"issues.":[67],"There":[68],"vast":[71],"amount":[72],"kinase":[75,153,182],"activity":[76,183],"data":[77,102,127,139,162,172,221,234],"public":[80],"domain,":[81],"used":[85,176],"many":[87],"ways.":[89],"Multitask":[90],"machine":[91],"learning":[92,215,226],"models":[93,243],"expected":[95],"excel":[97],"for":[98,177,201],"these":[99],"kinds":[100],"sets":[103,200],"because":[104],"they":[105],"learn":[107],"from":[108],"implicit":[109],"correlations":[110],"between":[111],"tasks":[112],"(in":[113],"this":[114,147,218,245],"case":[115],"variety":[119],"kinases).":[121],"However,":[122],"multitask":[123,213],"modeling":[124],"sparse":[126,220],"poses":[128],"two":[129,158],"major":[130],"challenges:":[131],"(i)":[132],"creating":[133],"balanced":[135,159],"train-test":[136],"split":[137,193],"without":[138,161],"leakage":[140],"(ii)":[142],"handling":[143],"missing":[144],"data.":[145],"In":[146],"work,":[148],"we":[149,210,231],"construct":[150],"benchmark":[154,246],"set":[155,173],"composed":[156],"splits":[160],"leakage,":[163],"using":[164],"random":[165,198],"dissimilarity-driven":[167,191],"cluster-based":[168,192],"mechanisms,":[169],"respectively.":[170],"benchmarking":[178],"developing":[180],"prediction":[184],"models.":[185,208,229],"Overall,":[186],"performance":[188,240],"on":[189,197,217,244],"lower":[195],"than":[196],"split-based":[199],"all":[202],"models,":[203,216],"indicating":[204],"poor":[205],"generalizability":[206],"Nevertheless,":[209],"show":[211],"deep":[214,225],"very":[219],"set,":[222],"outperform":[223],"single-task":[224],"tree-based":[228],"Finally,":[230],"demonstrate":[232],"imputation":[235],"does":[236],"not":[237],"improve":[238],"(multitask)":[242],"set.":[247]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":2}],"updated_date":"2026-05-08T15:41:06.802602","created_date":"2025-10-10T00:00:00"}
