{"id":"https://openalex.org/W4366822645","doi":"https://doi.org/10.1021/acs.jcim.2c01156","title":"Unraveling the Reaction Mechanism of Russell\u2019s Viper Venom Factor X Activator: A Paradigm for the Reactivity of Zinc Metalloproteinases?","display_name":"Unraveling the Reaction Mechanism of Russell\u2019s Viper Venom Factor X Activator: A Paradigm for the Reactivity of Zinc Metalloproteinases?","publication_year":2023,"publication_date":"2023-04-24","ids":{"openalex":"https://openalex.org/W4366822645","doi":"https://doi.org/10.1021/acs.jcim.2c01156","pmid":"https://pubmed.ncbi.nlm.nih.gov/37092784"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.2c01156","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.2c01156","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1021/acs.jcim.2c01156","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043413080","display_name":"Juliana Castro-Amorim","orcid":null},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]},{"id":"https://openalex.org/I4210138594","display_name":"Rede de Qu\u00edmica e Tecnologia","ror":"https://ror.org/04j14t006","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210138594"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Juliana Castro-Amorim","raw_affiliation_strings":["LAQV, REQUIMTE, Departamento de Qu\u00edmica e Bioqu\u00edmica, Faculdade de Ci\u00eancias, Universidade do Porto, Rua do Campo Alegre, s/n, Porto 4169-007, Portugal"],"affiliations":[{"raw_affiliation_string":"LAQV, REQUIMTE, Departamento de Qu\u00edmica e Bioqu\u00edmica, Faculdade de Ci\u00eancias, Universidade do Porto, Rua do Campo Alegre, s/n, Porto 4169-007, Portugal","institution_ids":["https://openalex.org/I4210138594","https://openalex.org/I182534213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076069892","display_name":"Ana Oliveira","orcid":"https://orcid.org/0000-0001-6594-6022"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]},{"id":"https://openalex.org/I4210138594","display_name":"Rede de Qu\u00edmica e Tecnologia","ror":"https://ror.org/04j14t006","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210138594"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Ana Oliveira","raw_affiliation_strings":["LAQV, REQUIMTE, Departamento de Qu\u00edmica e Bioqu\u00edmica, Faculdade de Ci\u00eancias, Universidade do Porto, Rua do Campo Alegre, s/n, Porto 4169-007, Portugal"],"affiliations":[{"raw_affiliation_string":"LAQV, REQUIMTE, Departamento de Qu\u00edmica e Bioqu\u00edmica, Faculdade de Ci\u00eancias, Universidade do Porto, Rua do Campo Alegre, s/n, Porto 4169-007, Portugal","institution_ids":["https://openalex.org/I4210138594","https://openalex.org/I182534213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061825257","display_name":"Ashis K. Mukherjee","orcid":"https://orcid.org/0000-0001-9869-858X"},"institutions":[{"id":"https://openalex.org/I4210148816","display_name":"Institute of Advanced Study in Science and Technology","ror":"https://ror.org/05mzfgt17","country_code":"IN","type":"education","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210098748","https://openalex.org/I4210134808","https://openalex.org/I4210148816"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ashis K. Mukherjee","raw_affiliation_strings":["Institute of Advanced Study in Science and Technology, Vigyan Path Garchuk, Paschim Boragaon, Guwahati 781035, Assam, India"],"affiliations":[{"raw_affiliation_string":"Institute of Advanced Study in Science and Technology, Vigyan Path Garchuk, Paschim Boragaon, Guwahati 781035, Assam, India","institution_ids":["https://openalex.org/I4210148816"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048088473","display_name":"Maria J. Ramos","orcid":"https://orcid.org/0000-0002-7554-8324"},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]},{"id":"https://openalex.org/I4210138594","display_name":"Rede de Qu\u00edmica e Tecnologia","ror":"https://ror.org/04j14t006","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210138594"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Maria J. Ramos","raw_affiliation_strings":["LAQV, REQUIMTE, Departamento de Qu\u00edmica e Bioqu\u00edmica, Faculdade de Ci\u00eancias, Universidade do Porto, Rua do Campo Alegre, s/n, Porto 4169-007, Portugal"],"affiliations":[{"raw_affiliation_string":"LAQV, REQUIMTE, Departamento de Qu\u00edmica e Bioqu\u00edmica, Faculdade de Ci\u00eancias, Universidade do Porto, Rua do Campo Alegre, s/n, Porto 4169-007, Portugal","institution_ids":["https://openalex.org/I4210138594","https://openalex.org/I182534213"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5073540033","display_name":"Pedro Alexandrino Fernandes","orcid":null},"institutions":[{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]},{"id":"https://openalex.org/I4210138594","display_name":"Rede de Qu\u00edmica e Tecnologia","ror":"https://ror.org/04j14t006","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210138594"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Pedro A. Fernandes","raw_affiliation_strings":["LAQV, REQUIMTE, Departamento de Qu\u00edmica e Bioqu\u00edmica, Faculdade de Ci\u00eancias, Universidade do Porto, Rua do Campo Alegre, s/n, Porto 4169-007, Portugal"],"affiliations":[{"raw_affiliation_string":"LAQV, REQUIMTE, Departamento de Qu\u00edmica e Bioqu\u00edmica, Faculdade de Ci\u00eancias, Universidade do Porto, Rua do Campo Alegre, s/n, Porto 4169-007, Portugal","institution_ids":["https://openalex.org/I4210138594","https://openalex.org/I182534213"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5073540033"],"corresponding_institution_ids":["https://openalex.org/I182534213","https://openalex.org/I4210138594"],"apc_list":null,"apc_paid":null,"fwci":1.8588,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.8654617,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"63","issue":"13","first_page":"4056","last_page":"4069"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11353","display_name":"Venomous Animal Envenomation and Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11353","display_name":"Venomous Animal Envenomation and Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nucleophile","display_name":"Nucleophile","score":0.6280683875083923},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.5904812812805176},{"id":"https://openalex.org/keywords/viper-venoms","display_name":"Viper Venoms","score":0.5003840923309326},{"id":"https://openalex.org/keywords/catalysis","display_name":"Catalysis","score":0.4325808882713318},{"id":"https://openalex.org/keywords/toxicology","display_name":"Toxicology","score":0.33440840244293213},{"id":"https://openalex.org/keywords/stereochemistry","display_name":"Stereochemistry","score":0.32333481311798096},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.282431960105896},{"id":"https://openalex.org/keywords/venom","display_name":"Venom","score":0.21542906761169434},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20310381054878235},{"id":"https://openalex.org/keywords/snake-venom","display_name":"Snake venom","score":0.17034444212913513}],"concepts":[{"id":"https://openalex.org/C178907741","wikidata":"https://www.wikidata.org/wiki/Q745930","display_name":"Nucleophile","level":3,"score":0.6280683875083923},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.5904812812805176},{"id":"https://openalex.org/C2910624479","wikidata":"https://www.wikidata.org/wiki/Q163656","display_name":"Viper Venoms","level":4,"score":0.5003840923309326},{"id":"https://openalex.org/C161790260","wikidata":"https://www.wikidata.org/wiki/Q82264","display_name":"Catalysis","level":2,"score":0.4325808882713318},{"id":"https://openalex.org/C33070731","wikidata":"https://www.wikidata.org/wiki/Q7218","display_name":"Toxicology","level":1,"score":0.33440840244293213},{"id":"https://openalex.org/C71240020","wikidata":"https://www.wikidata.org/wiki/Q186011","display_name":"Stereochemistry","level":1,"score":0.32333481311798096},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.282431960105896},{"id":"https://openalex.org/C2779448229","wikidata":"https://www.wikidata.org/wiki/Q3386847","display_name":"Venom","level":2,"score":0.21542906761169434},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20310381054878235},{"id":"https://openalex.org/C2776725428","wikidata":"https://www.wikidata.org/wiki/Q424200","display_name":"Snake venom","level":3,"score":0.17034444212913513}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000997","descriptor_name":"Antivenins","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000997","descriptor_name":"Antivenins","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000997","descriptor_name":"Antivenins","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000997","descriptor_name":"Antivenins","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000997","descriptor_name":"Antivenins","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D003546","descriptor_name":"Cysteine Endopeptidases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008666","descriptor_name":"Metalloendopeptidases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009363","descriptor_name":"Neoplasm Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014757","descriptor_name":"Viper Venoms","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D014757","descriptor_name":"Viper Venoms","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D014757","descriptor_name":"Viper Venoms","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D014757","descriptor_name":"Viper Venoms","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D014757","descriptor_name":"Viper Venoms","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D014757","descriptor_name":"Viper Venoms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D014757","descriptor_name":"Viper Venoms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D014757","descriptor_name":"Viper Venoms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D014757","descriptor_name":"Viper Venoms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D014757","descriptor_name":"Viper Venoms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015032","descriptor_name":"Zinc","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015032","descriptor_name":"Zinc","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015032","descriptor_name":"Zinc","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015032","descriptor_name":"Zinc","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015032","descriptor_name":"Zinc","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017840","descriptor_name":"Daboia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017840","descriptor_name":"Daboia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017840","descriptor_name":"Daboia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017840","descriptor_name":"Daboia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017840","descriptor_name":"Daboia","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D045726","descriptor_name":"Metalloproteases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045726","descriptor_name":"Metalloproteases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045726","descriptor_name":"Metalloproteases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045726","descriptor_name":"Metalloproteases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045726","descriptor_name":"Metalloproteases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1021/acs.jcim.2c01156","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.2c01156","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:37092784","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37092784","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10336966","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10336966","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10336966/pdf/ci2c01156.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1021/acs.jcim.2c01156","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.2c01156","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6200000047683716,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1595396244","display_name":null,"funder_award_id":"PTDC/QUI-OUT/1401/2020","funder_id":"https://openalex.org/F4320323642","funder_display_name":"Minist\u00e9rio da Ci\u00eancia, Tecnologia e Ensino Superior"},{"id":"https://openalex.org/G213682523","display_name":null,"funder_award_id":"FCT/MCTES","funder_id":"https://openalex.org/F4320323642","funder_display_name":"Minist\u00e9rio da Ci\u00eancia, Tecnologia e Ensino Superior"},{"id":"https://openalex.org/G261752899","display_name":null,"funder_award_id":"PTDC/QUI-OUT/1401/2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G3272457656","display_name":null,"funder_award_id":"UIDB/","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G3352359078","display_name":null,"funder_award_id":"UIDB/50006/2020","funder_id":"https://openalex.org/F4320323642","funder_display_name":"Minist\u00e9rio da Ci\u00eancia, Tecnologia e Ensino Superior"},{"id":"https://openalex.org/G5226653915","display_name":null,"funder_award_id":"FCT/MCT","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G6299983296","display_name":null,"funder_award_id":"PTDC/","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G738030663","display_name":null,"funder_award_id":"FCT/MCTES","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G8213652065","display_name":null,"funder_award_id":"UIDB/50006/2020","funder_id":"https://openalex.org/F4320330090","funder_display_name":"Laborat\u00f3rio Associado para a Qu\u00edmica Verde"},{"id":"https://openalex.org/G8892693454","display_name":null,"funder_award_id":"UIDB/50006/2020","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G892194516","display_name":null,"funder_award_id":"PTDC/QUI-OUT/1401/202","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"}],"funders":[{"id":"https://openalex.org/F4320323642","display_name":"Minist\u00e9rio da Ci\u00eancia, Tecnologia e Ensino Superior","ror":"https://ror.org/045b9pr88"},{"id":"https://openalex.org/F4320330090","display_name":"Laborat\u00f3rio Associado para a Qu\u00edmica Verde","ror":null},{"id":"https://openalex.org/F4320334779","display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","ror":"https://ror.org/00snfqn58"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":101,"referenced_works":["https://openalex.org/W142221347","https://openalex.org/W301287050","https://openalex.org/W1564276617","https://openalex.org/W1591272093","https://openalex.org/W1627718954","https://openalex.org/W1835135188","https://openalex.org/W1968344479","https://openalex.org/W1969751204","https://openalex.org/W1971104392","https://openalex.org/W1972891911","https://openalex.org/W1976866837","https://openalex.org/W1977229831","https://openalex.org/W1979379761","https://openalex.org/W1980742802","https://openalex.org/W1984106304","https://openalex.org/W1985366030","https://openalex.org/W1986894327","https://openalex.org/W1987525682","https://openalex.org/W1992173555","https://openalex.org/W1995022799","https://openalex.org/W1995077803","https://openalex.org/W2001329337","https://openalex.org/W2009345105","https://openalex.org/W2015621722","https://openalex.org/W2019555480","https://openalex.org/W2027815611","https://openalex.org/W2028741172","https://openalex.org/W2029319561","https://openalex.org/W2029667189","https://openalex.org/W2032244965","https://openalex.org/W2041279071","https://openalex.org/W2042585162","https://openalex.org/W2062852634","https://openalex.org/W2064495906","https://openalex.org/W2065821343","https://openalex.org/W2066170749","https://openalex.org/W2070133143","https://openalex.org/W2077226793","https://openalex.org/W2084872184","https://openalex.org/W2087596773","https://openalex.org/W2094642658","https://openalex.org/W2097604225","https://openalex.org/W2112410378","https://openalex.org/W2117458899","https://openalex.org/W2122976061","https://openalex.org/W2123073660","https://openalex.org/W2138541976","https://openalex.org/W2139459324","https://openalex.org/W2147993766","https://openalex.org/W2149525061","https://openalex.org/W2163961191","https://openalex.org/W2168240189","https://openalex.org/W2191815439","https://openalex.org/W2275563446","https://openalex.org/W2320623401","https://openalex.org/W2343403239","https://openalex.org/W2346305089","https://openalex.org/W2398288095","https://openalex.org/W2418162737","https://openalex.org/W2484443252","https://openalex.org/W2527520038","https://openalex.org/W2530188498","https://openalex.org/W2535803710","https://openalex.org/W2562829950","https://openalex.org/W2564446806","https://openalex.org/W2589845476","https://openalex.org/W2789518233","https://openalex.org/W2792058791","https://openalex.org/W2799402654","https://openalex.org/W2799876761","https://openalex.org/W2804822363","https://openalex.org/W2809378964","https://openalex.org/W2811110953","https://openalex.org/W2893353589","https://openalex.org/W2916717517","https://openalex.org/W2952547239","https://openalex.org/W2956843078","https://openalex.org/W2976778560","https://openalex.org/W2989052455","https://openalex.org/W2992890331","https://openalex.org/W2998313399","https://openalex.org/W3009263450","https://openalex.org/W3024954815","https://openalex.org/W3038553661","https://openalex.org/W3038664044","https://openalex.org/W3044998529","https://openalex.org/W3045103008","https://openalex.org/W3073653845","https://openalex.org/W3106975846","https://openalex.org/W3109865930","https://openalex.org/W3112999791","https://openalex.org/W3116364907","https://openalex.org/W3136692657","https://openalex.org/W3138679836","https://openalex.org/W3203562063","https://openalex.org/W4211095820","https://openalex.org/W4225276223","https://openalex.org/W4249231186","https://openalex.org/W4280551096","https://openalex.org/W4281659838","https://openalex.org/W4281744888"],"related_works":["https://openalex.org/W2171509264","https://openalex.org/W1575818491","https://openalex.org/W1606928165","https://openalex.org/W1578180965","https://openalex.org/W2124799383","https://openalex.org/W2070281631","https://openalex.org/W2168663846","https://openalex.org/W1998861698","https://openalex.org/W2082997244","https://openalex.org/W2048336391"],"abstract_inverted_index":{"Snake":[0],"venom":[1,50],"metalloproteinases":[2],"(SVMPs)":[3],"are":[4,40],"important":[5],"drug":[6],"targets":[7],"against":[8],"snakebite":[9],"envenoming,":[10],"the":[11,16,30,35,60,68,81,101,116,140,163,174,181,208,211,218,222,229,236],"neglected":[12],"tropical":[13],"disease":[14],"with":[15,188],"highest":[17],"mortality":[18],"worldwide.":[19],"Here,":[20],"we":[21,114],"focus":[22],"on":[23,162],"Russell's":[24],"viper":[25,49],"(<i>Daboia":[26],"russelii</i>),":[27],"one":[28],"of":[29,34,100,103,105,119,170,180,192,210,221],"\"big":[31],"four\"":[32],"snakes":[33],"Indian":[36],"subcontinent":[37],"that,":[38],"together,":[39],"responsible":[41],"for":[42,95],"ca.":[43],"50,000":[44],"fatalities":[45],"annually.":[46],"The":[47,136,148],"\"Russell's":[48],"factor":[51,63],"X":[52,64],"activator\"":[53],"(RVV-X),":[54],"a":[55,97,123,152,198],"highly":[56],"toxic":[57],"metalloproteinase,":[58],"activates":[59],"blood":[61,71],"coagulation":[62],"(FX),":[65],"leading":[66],"to":[67,87,130,178,216],"prey's":[69],"abnormal":[70],"clotting":[72],"and":[73,91,184],"death.":[74],"Given":[75],"its":[76,132],"tremendous":[77],"public":[78],"health":[79],"impact,":[80],"WHO":[82],"recognized":[83],"an":[84,156,167,189],"urgent":[85],"need":[86],"develop":[88],"efficient,":[89],"heat-stable,":[90],"affordable-for-all":[92],"small-molecule":[93],"inhibitors,":[94],"which":[96],"deep":[98],"understanding":[99],"mechanisms":[102],"action":[104],"snake's":[106],"principal":[107],"toxins":[108],"is":[109],"fundamental.":[110],"In":[111],"this":[112,239],"study,":[113],"determine":[115],"catalytic":[117,141],"mechanism":[118],"RVV-X":[120],"by":[121,155,202,206,228],"using":[122],"density":[124],"functional":[125],"theory/molecular":[126],"mechanics":[127],"(DFT:MM)":[128],"methodology":[129],"calculate":[131],"free":[133],"energy":[134,190],"profile.":[135],"results":[137],"showed":[138],"that":[139],"process":[142],"takes":[143],"place":[144],"via":[145],"two":[146],"steps.":[147],"first":[149],"step":[150,176,240],"involves":[151],"nucleophilic":[153],"attack":[154],"in":[157,204],"situ":[158],"generated":[159],"hydroxide":[160,223],"ion":[161],"substrate":[164],"carbonyl,":[165],"yielding":[166],"activation":[168],"barrier":[169,191],"17.7":[171],"kcal\u00b7mol<sup>-1</sup>,":[172],"while":[173],"second":[175],"corresponds":[177],"protonation":[179],"peptide":[182,185],"nitrogen":[183],"bond":[186],"cleavage":[187],"23.1":[193],"kcal\u00b7mol<sup>-1</sup>.":[194],"Our":[195],"study":[196],"shows":[197],"unique":[199],"role":[200],"played":[201],"Zn<sup>2+</sup>":[203,237],"catalysis":[205],"lowering":[207],"p<i>K</i><sub>a</sub>":[209],"Zn<sup>2+</sup>-bound":[212],"water":[213],"molecule,":[214],"enough":[215],"permit":[217],"swift":[219],"formation":[220],"nucleophile":[224],"through":[225],"barrierless":[226],"deprotonation":[227],"formally":[230],"much":[231],"less":[232],"basic":[233],"Glu140.":[234],"Without":[235],"cofactor,":[238],"would":[241],"be":[242],"rate-limiting.":[243]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
