{"id":"https://openalex.org/W4293785706","doi":"https://doi.org/10.1021/acs.jcim.2c00395","title":"Structure of POPC Lipid Bilayers in OPLS3e Force Field","display_name":"Structure of POPC Lipid Bilayers in OPLS3e Force Field","publication_year":2022,"publication_date":"2022-08-31","ids":{"openalex":"https://openalex.org/W4293785706","doi":"https://doi.org/10.1021/acs.jcim.2c00395","pmid":"https://pubmed.ncbi.nlm.nih.gov/36044537"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.2c00395","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.2c00395","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.2c00395","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.2c00395","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5011646571","display_name":"Milla Kurki","orcid":"https://orcid.org/0000-0001-8311-6057"},"institutions":[{"id":"https://openalex.org/I175532246","display_name":"University of Eastern Finland","ror":"https://ror.org/00cyydd11","country_code":"FI","type":"education","lineage":["https://openalex.org/I175532246"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Milla Kurki","raw_affiliation_strings":["School of Pharmacy, University of Eastern Finland, Kuopio Campus, Yliopistonranta 1 C, P.O. Box 1627, 70211 Kuopio, Finland"],"raw_orcid":"https://orcid.org/0000-0001-8311-6057","affiliations":[{"raw_affiliation_string":"School of Pharmacy, University of Eastern Finland, Kuopio Campus, Yliopistonranta 1 C, P.O. Box 1627, 70211 Kuopio, Finland","institution_ids":["https://openalex.org/I175532246"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074083544","display_name":"Antti Poso","orcid":"https://orcid.org/0000-0003-4196-4204"},"institutions":[{"id":"https://openalex.org/I175532246","display_name":"University of Eastern Finland","ror":"https://ror.org/00cyydd11","country_code":"FI","type":"education","lineage":["https://openalex.org/I175532246"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Antti Poso","raw_affiliation_strings":["School of Pharmacy, University of Eastern Finland, Kuopio Campus, Yliopistonranta 1 C, P.O. Box 1627, 70211 Kuopio, Finland"],"raw_orcid":"https://orcid.org/0000-0003-4196-4204","affiliations":[{"raw_affiliation_string":"School of Pharmacy, University of Eastern Finland, Kuopio Campus, Yliopistonranta 1 C, P.O. Box 1627, 70211 Kuopio, Finland","institution_ids":["https://openalex.org/I175532246"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079004179","display_name":"Piia Bartos","orcid":"https://orcid.org/0000-0001-6002-1856"},"institutions":[{"id":"https://openalex.org/I175532246","display_name":"University of Eastern Finland","ror":"https://ror.org/00cyydd11","country_code":"FI","type":"education","lineage":["https://openalex.org/I175532246"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Piia Bartos","raw_affiliation_strings":["School of Pharmacy, University of Eastern Finland, Kuopio Campus, Yliopistonranta 1 C, P.O. Box 1627, 70211 Kuopio, Finland"],"raw_orcid":"https://orcid.org/0000-0001-6002-1856","affiliations":[{"raw_affiliation_string":"School of Pharmacy, University of Eastern Finland, Kuopio Campus, Yliopistonranta 1 C, P.O. Box 1627, 70211 Kuopio, Finland","institution_ids":["https://openalex.org/I175532246"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5011449850","display_name":"Markus S. Miettinen","orcid":"https://orcid.org/0000-0002-3999-4722"},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Markus S. Miettinen","raw_affiliation_strings":["Computational Biology Unit, Department of Informatics, University of Bergen, 5007 Bergen, Norway","Department of Chemistry, University of Bergen, 5007 Bergen, Norway"],"raw_orcid":"https://orcid.org/0000-0002-3999-4722","affiliations":[{"raw_affiliation_string":"Computational Biology Unit, Department of Informatics, University of Bergen, 5007 Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Department of Chemistry, University of Bergen, 5007 Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5079004179"],"corresponding_institution_ids":["https://openalex.org/I175532246"],"apc_list":null,"apc_paid":null,"fwci":3.5255,"has_fulltext":false,"cited_by_count":50,"citation_normalized_percentile":{"value":0.94248474,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"62","issue":"24","first_page":"6462","last_page":"6474"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11582","display_name":"Nanopore and Nanochannel Transport Studies","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/popc","display_name":"POPC","score":0.9743244647979736},{"id":"https://openalex.org/keywords/force-field","display_name":"Force field (fiction)","score":0.7301835417747498},{"id":"https://openalex.org/keywords/lipid-bilayer","display_name":"Lipid bilayer","score":0.6870840191841125},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.658684492111206},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.6368567943572998},{"id":"https://openalex.org/keywords/membrane","display_name":"Membrane","score":0.6039416193962097},{"id":"https://openalex.org/keywords/chemical-physics","display_name":"Chemical physics","score":0.6028909087181091},{"id":"https://openalex.org/keywords/bilayer","display_name":"Bilayer","score":0.5723376274108887},{"id":"https://openalex.org/keywords/potential-of-mean-force","display_name":"Potential of mean force","score":0.520223081111908},{"id":"https://openalex.org/keywords/biological-membrane","display_name":"Biological membrane","score":0.46359625458717346},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.2629106044769287},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.10051164031028748},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.05160340666770935}],"concepts":[{"id":"https://openalex.org/C2780943371","wikidata":"https://www.wikidata.org/wiki/Q10860475","display_name":"POPC","level":4,"score":0.9743244647979736},{"id":"https://openalex.org/C10803110","wikidata":"https://www.wikidata.org/wiki/Q1341441","display_name":"Force field (fiction)","level":2,"score":0.7301835417747498},{"id":"https://openalex.org/C39944091","wikidata":"https://www.wikidata.org/wiki/Q423279","display_name":"Lipid bilayer","level":3,"score":0.6870840191841125},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.658684492111206},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.6368567943572998},{"id":"https://openalex.org/C41625074","wikidata":"https://www.wikidata.org/wiki/Q176088","display_name":"Membrane","level":2,"score":0.6039416193962097},{"id":"https://openalex.org/C159467904","wikidata":"https://www.wikidata.org/wiki/Q2001702","display_name":"Chemical physics","level":1,"score":0.6028909087181091},{"id":"https://openalex.org/C192157962","wikidata":"https://www.wikidata.org/wiki/Q4087243","display_name":"Bilayer","level":3,"score":0.5723376274108887},{"id":"https://openalex.org/C175634916","wikidata":"https://www.wikidata.org/wiki/Q17075777","display_name":"Potential of mean force","level":3,"score":0.520223081111908},{"id":"https://openalex.org/C125501631","wikidata":"https://www.wikidata.org/wiki/Q1587185","display_name":"Biological membrane","level":3,"score":0.46359625458717346},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.2629106044769287},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.10051164031028748},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.05160340666770935},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006859","descriptor_name":"Hydrogen","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006859","descriptor_name":"Hydrogen","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006859","descriptor_name":"Hydrogen","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008051","descriptor_name":"Lipid Bilayers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D008051","descriptor_name":"Lipid Bilayers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D008051","descriptor_name":"Lipid Bilayers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010713","descriptor_name":"Phosphatidylcholines","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010713","descriptor_name":"Phosphatidylcholines","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D010713","descriptor_name":"Phosphatidylcholines","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1021/acs.jcim.2c00395","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.2c00395","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.2c00395","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:36044537","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36044537","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9795559","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9795559","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1021/acs.jcim.2c00395","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.2c00395","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.2c00395","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5099999904632568,"display_name":"Clean water and sanitation","id":"https://metadata.un.org/sdg/6"}],"awards":[{"id":"https://openalex.org/G5358989128","display_name":null,"funder_award_id":"325022","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"}],"funders":[{"id":"https://openalex.org/F4320310055","display_name":"It\u00e4-Suomen Yliopisto","ror":"https://ror.org/00cyydd11"},{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"},{"id":"https://openalex.org/F4320321726","display_name":"Suomen Kulttuurirahasto","ror":"https://ror.org/027xav248"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4293785706.pdf"},"referenced_works_count":114,"referenced_works":["https://openalex.org/W899723384","https://openalex.org/W1031578623","https://openalex.org/W1491824558","https://openalex.org/W1965311589","https://openalex.org/W1965817219","https://openalex.org/W1972758026","https://openalex.org/W1972809835","https://openalex.org/W1976499671","https://openalex.org/W1977486075","https://openalex.org/W1979252698","https://openalex.org/W1983439040","https://openalex.org/W1991794210","https://openalex.org/W1993801027","https://openalex.org/W1994994504","https://openalex.org/W2005679019","https://openalex.org/W2006839059","https://openalex.org/W2007313234","https://openalex.org/W2017100790","https://openalex.org/W2021520922","https://openalex.org/W2024134244","https://openalex.org/W2027227452","https://openalex.org/W2028702957","https://openalex.org/W2029055984","https://openalex.org/W2029667189","https://openalex.org/W2041345240","https://openalex.org/W2041638382","https://openalex.org/W2044512608","https://openalex.org/W2048623371","https://openalex.org/W2053837540","https://openalex.org/W2054406591","https://openalex.org/W2054537071","https://openalex.org/W2054755333","https://openalex.org/W2059715478","https://openalex.org/W2066414494","https://openalex.org/W2071827681","https://openalex.org/W2081693079","https://openalex.org/W2084153702","https://openalex.org/W2086634221","https://openalex.org/W2088536371","https://openalex.org/W2096681544","https://openalex.org/W2125872855","https://openalex.org/W2150064848","https://openalex.org/W2162907973","https://openalex.org/W2170711116","https://openalex.org/W2222589778","https://openalex.org/W2227133081","https://openalex.org/W2252062368","https://openalex.org/W2293232984","https://openalex.org/W2314330043","https://openalex.org/W2323104785","https://openalex.org/W2344786551","https://openalex.org/W2510475640","https://openalex.org/W2540491215","https://openalex.org/W2554791570","https://openalex.org/W2557292438","https://openalex.org/W2566426621","https://openalex.org/W2571236583","https://openalex.org/W2607476399","https://openalex.org/W2609016433","https://openalex.org/W2781674676","https://openalex.org/W2790442679","https://openalex.org/W2795381294","https://openalex.org/W2800138477","https://openalex.org/W2891525057","https://openalex.org/W2902556395","https://openalex.org/W2912818999","https://openalex.org/W2936969503","https://openalex.org/W2954392247","https://openalex.org/W2977462811","https://openalex.org/W3030499707","https://openalex.org/W3086197421","https://openalex.org/W3119461093","https://openalex.org/W3123026855","https://openalex.org/W3149078497","https://openalex.org/W3167019654","https://openalex.org/W3195748254","https://openalex.org/W3207456055","https://openalex.org/W4210272186","https://openalex.org/W4393412942","https://openalex.org/W4393418052","https://openalex.org/W4393439347","https://openalex.org/W4393445803","https://openalex.org/W4393448352","https://openalex.org/W4393471591","https://openalex.org/W4393471599","https://openalex.org/W4393497915","https://openalex.org/W4393502672","https://openalex.org/W4393503820","https://openalex.org/W4393519543","https://openalex.org/W4393535183","https://openalex.org/W4393537997","https://openalex.org/W4393541308","https://openalex.org/W4393589706","https://openalex.org/W4393590560","https://openalex.org/W4393612568","https://openalex.org/W4393627411","https://openalex.org/W4393634606","https://openalex.org/W4393655122","https://openalex.org/W4393676629","https://openalex.org/W4393714945","https://openalex.org/W4393717812","https://openalex.org/W4393732440","https://openalex.org/W4393735686","https://openalex.org/W4393789243","https://openalex.org/W4393800674","https://openalex.org/W4393849685","https://openalex.org/W4393876015","https://openalex.org/W4393880768","https://openalex.org/W4393920274","https://openalex.org/W4393921889","https://openalex.org/W4394021354","https://openalex.org/W4394032344","https://openalex.org/W4394043765","https://openalex.org/W4394071722"],"related_works":["https://openalex.org/W2583268402","https://openalex.org/W2787137782","https://openalex.org/W2277120967","https://openalex.org/W2429901985","https://openalex.org/W1994076503","https://openalex.org/W2139844303","https://openalex.org/W2011769372","https://openalex.org/W2114598418","https://openalex.org/W2064772208","https://openalex.org/W2299341255"],"abstract_inverted_index":{"in":[0,8],"the":[1,17],"surrounding":[2],"solvent,":[3],"which":[4],"might":[5],"cause":[6],"issues":[7],"systems":[9],"sensitive":[10],"to":[11],"correct":[12],"charge":[13],"distribution":[14],"profiles":[15],"across":[16],"membrane.":[18]},"counts_by_year":[{"year":2026,"cited_by_count":8},{"year":2025,"cited_by_count":19},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":2}],"updated_date":"2026-05-22T06:13:13.366637","created_date":"2025-10-10T00:00:00"}
