{"id":"https://openalex.org/W4282835253","doi":"https://doi.org/10.1021/acs.jcim.2c00127","title":"Predicting Protein\u2013Ligand Docking Structure with Graph Neural Network","display_name":"Predicting Protein\u2013Ligand Docking Structure with Graph Neural Network","publication_year":2022,"publication_date":"2022-06-14","ids":{"openalex":"https://openalex.org/W4282835253","doi":"https://doi.org/10.1021/acs.jcim.2c00127","pmid":"https://pubmed.ncbi.nlm.nih.gov/35699430"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.2c00127","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.2c00127","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10279412/pdf/nihms-1905637.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071846463","display_name":"Huaipan Jiang","orcid":"https://orcid.org/0000-0002-8160-1611"},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Huaipan Jiang","raw_affiliation_strings":["Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States"],"raw_orcid":"https://orcid.org/0000-0002-8160-1611","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024072185","display_name":"Jian Wang","orcid":"https://orcid.org/0000-0001-7768-2802"},"institutions":[{"id":"https://openalex.org/I82783531","display_name":"Penn State Milton S. Hershey Medical Center","ror":"https://ror.org/01h22ap11","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I82783531"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jian Wang","raw_affiliation_strings":["Departments of Pharmacology and Biochemistry and Molecular Biology, Pennsylvania State College of Medicine, Hershey, Pennsylvania 17033, United States"],"raw_orcid":"https://orcid.org/0000-0001-7768-2802","affiliations":[{"raw_affiliation_string":"Departments of Pharmacology and Biochemistry and Molecular Biology, Pennsylvania State College of Medicine, Hershey, Pennsylvania 17033, United States","institution_ids":["https://openalex.org/I82783531"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063658433","display_name":"Weilin Cong","orcid":"https://orcid.org/0000-0002-8726-3238"},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Weilin Cong","raw_affiliation_strings":["Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States"],"raw_orcid":"https://orcid.org/0000-0002-8726-3238","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036716973","display_name":"Yihe Huang","orcid":"https://orcid.org/0000-0002-9642-1170"},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yihe Huang","raw_affiliation_strings":["Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States"],"raw_orcid":"https://orcid.org/0000-0002-9642-1170","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087039920","display_name":"Morteza Ramezani","orcid":"https://orcid.org/0000-0002-7498-5522"},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Morteza Ramezani","raw_affiliation_strings":["Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States"],"raw_orcid":"https://orcid.org/0000-0002-7498-5522","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067815274","display_name":"Anup Sarma","orcid":"https://orcid.org/0000-0002-0098-4498"},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anup Sarma","raw_affiliation_strings":["Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States"],"raw_orcid":"https://orcid.org/0000-0002-0098-4498","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033490428","display_name":"Nikolay V. Dokholyan","orcid":null},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]},{"id":"https://openalex.org/I82783531","display_name":"Penn State Milton S. Hershey Medical Center","ror":"https://ror.org/01h22ap11","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I82783531"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nikolay V. Dokholyan","raw_affiliation_strings":["Departments of Chemistry and Biomedical Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States","Departments of Pharmacology and Biochemistry and Molecular Biology, Pennsylvania State College of Medicine, Hershey, Pennsylvania 17033, United States"],"raw_orcid":"https://orcid.org/0000-0002-8225-4025","affiliations":[{"raw_affiliation_string":"Departments of Chemistry and Biomedical Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States","institution_ids":["https://openalex.org/I130769515"]},{"raw_affiliation_string":"Departments of Pharmacology and Biochemistry and Molecular Biology, Pennsylvania State College of Medicine, Hershey, Pennsylvania 17033, United States","institution_ids":["https://openalex.org/I82783531"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076083402","display_name":"Mehrdad Mahdavi","orcid":"https://orcid.org/0000-0003-2679-6679"},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mehrdad Mahdavi","raw_affiliation_strings":["Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States"],"raw_orcid":"https://orcid.org/0000-0003-2679-6679","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007116603","display_name":"Mahmut Kandemir","orcid":"https://orcid.org/0000-0002-9940-9951"},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mahmut T. Kandemir","raw_affiliation_strings":["Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States"],"raw_orcid":"https://orcid.org/0000-0002-9940-9951","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Pennsylvania State University, State College, Pennsylvania 16802, United States","institution_ids":["https://openalex.org/I130769515"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5071846463"],"corresponding_institution_ids":["https://openalex.org/I130769515"],"apc_list":null,"apc_paid":null,"fwci":8.6839,"has_fulltext":true,"cited_by_count":64,"citation_normalized_percentile":{"value":0.98291347,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"62","issue":"12","first_page":"2923","last_page":"2932"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9800999760627747,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9729999899864197,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.7741256356239319},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7640533447265625},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.7568496465682983},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.6612791419029236},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5770566463470459},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5419514775276184},{"id":"https://openalex.org/keywords/protein\u2013ligand-docking","display_name":"Protein\u2013ligand docking","score":0.516916036605835},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5153319239616394},{"id":"https://openalex.org/keywords/speedup","display_name":"Speedup","score":0.4900580644607544},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4685783088207245},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34185880422592163},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.18467602133750916},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.0838426947593689}],"concepts":[{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.7741256356239319},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7640533447265625},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.7568496465682983},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.6612791419029236},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5770566463470459},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5419514775276184},{"id":"https://openalex.org/C77319485","wikidata":"https://www.wikidata.org/wiki/Q7251520","display_name":"Protein\u2013ligand docking","level":4,"score":0.516916036605835},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5153319239616394},{"id":"https://openalex.org/C68339613","wikidata":"https://www.wikidata.org/wiki/Q1549489","display_name":"Speedup","level":2,"score":0.4900580644607544},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4685783088207245},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34185880422592163},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.18467602133750916},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0838426947593689},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1021/acs.jcim.2c00127","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.2c00127","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:35699430","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35699430","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10279412","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10279412","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10279412/pdf/nihms-1905637.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:10279412","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10279412","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10279412/pdf/nihms-1905637.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"},"sustainable_development_goals":[{"score":0.5799999833106995,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G174627229","display_name":null,"funder_award_id":"1931531","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G293372270","display_name":null,"funder_award_id":"1R35GM134864","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3080823497","display_name":null,"funder_award_id":"1955815","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4257531402","display_name":null,"funder_award_id":"1629915","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4861908383","display_name":null,"funder_award_id":"1RF1AG071675","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4906924687","display_name":null,"funder_award_id":"TR002014","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G5479771300","display_name":null,"funder_award_id":"UL1 TR002014","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G5903219635","display_name":null,"funder_award_id":"2028929","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6190180749","display_name":null,"funder_award_id":"UL1 TR002014","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7045959657","display_name":null,"funder_award_id":"1629129","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7292250629","display_name":null,"funder_award_id":"1R01AG065294","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7544350372","display_name":null,"funder_award_id":"TR002014","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7917365220","display_name":null,"funder_award_id":"2008398","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320307409","display_name":"Passano Foundation","ror":"https://ror.org/01jmtnr89"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4282835253.pdf","grobid_xml":"https://content.openalex.org/works/W4282835253.grobid-xml"},"referenced_works_count":64,"referenced_works":["https://openalex.org/W1513150088","https://openalex.org/W1970577443","https://openalex.org/W1978809115","https://openalex.org/W1985526958","https://openalex.org/W1992288517","https://openalex.org/W1998568556","https://openalex.org/W2003356525","https://openalex.org/W2005647584","https://openalex.org/W2008870093","https://openalex.org/W2012084558","https://openalex.org/W2013085020","https://openalex.org/W2025970767","https://openalex.org/W2028049393","https://openalex.org/W2031989833","https://openalex.org/W2032804939","https://openalex.org/W2039240409","https://openalex.org/W2041554376","https://openalex.org/W2045167826","https://openalex.org/W2047094503","https://openalex.org/W2052030759","https://openalex.org/W2087621126","https://openalex.org/W2097606916","https://openalex.org/W2103300124","https://openalex.org/W2105668062","https://openalex.org/W2108166985","https://openalex.org/W2108257090","https://openalex.org/W2114320488","https://openalex.org/W2114704115","https://openalex.org/W2118587156","https://openalex.org/W2122465970","https://openalex.org/W2134967712","https://openalex.org/W2151253605","https://openalex.org/W2160821308","https://openalex.org/W2164220181","https://openalex.org/W2214665483","https://openalex.org/W2279949369","https://openalex.org/W2285239529","https://openalex.org/W2332031535","https://openalex.org/W2337279793","https://openalex.org/W2417432242","https://openalex.org/W2540100518","https://openalex.org/W2549694484","https://openalex.org/W2550887636","https://openalex.org/W2560065989","https://openalex.org/W2583907533","https://openalex.org/W2587598315","https://openalex.org/W2741292700","https://openalex.org/W2784213390","https://openalex.org/W2792758786","https://openalex.org/W2888400067","https://openalex.org/W2902812092","https://openalex.org/W2932935282","https://openalex.org/W2951676304","https://openalex.org/W2969996838","https://openalex.org/W2978132989","https://openalex.org/W2978484973","https://openalex.org/W3034681945","https://openalex.org/W3084428871","https://openalex.org/W3092652809","https://openalex.org/W3104705366","https://openalex.org/W3106162654","https://openalex.org/W3109549311","https://openalex.org/W3164107346","https://openalex.org/W4221165850"],"related_works":["https://openalex.org/W1581147483","https://openalex.org/W2059230675","https://openalex.org/W2057846043","https://openalex.org/W2336040088","https://openalex.org/W2027065525","https://openalex.org/W2750247885","https://openalex.org/W2773493604","https://openalex.org/W2269591907","https://openalex.org/W4308805210","https://openalex.org/W2093426296"],"abstract_inverted_index":{"Modern":[0],"day":[1],"drug":[2,20,28],"discovery":[3,29],"is":[4],"extremely":[5],"expensive":[6],"and":[7,15,35,81,96,112],"time":[8],"consuming.":[9],"Although":[10],"computational":[11,23],"approaches":[12,43],"help":[13],"accelerate":[14],"decrease":[16],"the":[17,52,101,108],"cost":[18],"of":[19],"discovery,":[21],"existing":[22],"software":[24,67],"packages":[25],"for":[26,47],"docking-based":[27],"suffer":[30],"from":[31,114],"both":[32,93],"low":[33],"accuracy":[34],"high":[36],"latency.":[37],"A":[38],"few":[39],"recent":[40],"machine":[41,103],"learning-based":[42],"have":[44],"been":[45],"proposed":[46],"virtual":[48],"screening":[49],"by":[50],"improving":[51],"ability":[53],"to":[54,68,116,121],"evaluate":[55,82],"protein-ligand":[56],"binding":[57],"affinity,":[58],"but":[59],"such":[60],"methods":[61],"rely":[62],"heavily":[63],"on":[64],"conventional":[65],"docking":[66,70,109,129],"sample":[69],"poses,":[71],"which":[72,91],"results":[73],"in":[74],"excessive":[75],"execution":[76],"latencies.":[77],"Here,":[78],"we":[79],"propose":[80],"a":[83,126],"novel":[84],"graph":[85],"neural":[86],"network":[87],"(GNN)-based":[88],"framework,":[89],"MedusaGraph,":[90],"includes":[92],"pose-prediction":[94],"(sampling)":[95],"pose-selection":[97],"(scoring)":[98],"models.":[99],"Unlike":[100],"previous":[102],"learning-centric":[104],"studies,":[105],"MedusaGraph":[106],"generates":[107],"poses":[110],"directly":[111],"achieves":[113],"10":[115],"100":[117],"times":[118],"speedup":[119],"compared":[120],"state-of-the-art":[122],"approaches,":[123],"while":[124],"having":[125],"slightly":[127],"better":[128],"accuracy.":[130]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":24},{"year":2023,"cited_by_count":22},{"year":2022,"cited_by_count":2}],"updated_date":"2026-05-08T15:41:06.802602","created_date":"2025-10-10T00:00:00"}
