{"id":"https://openalex.org/W4205134820","doi":"https://doi.org/10.1021/acs.jcim.1c01484","title":"Structural Insights into the Cofactor Role of Heparin/Heparan Sulfate in Binding between the SARS-CoV-2 Spike Protein and Host Angiotensin-Converting Enzyme II","display_name":"Structural Insights into the Cofactor Role of Heparin/Heparan Sulfate in Binding between the SARS-CoV-2 Spike Protein and Host Angiotensin-Converting Enzyme II","publication_year":2022,"publication_date":"2022-01-21","ids":{"openalex":"https://openalex.org/W4205134820","doi":"https://doi.org/10.1021/acs.jcim.1c01484","pmid":"https://pubmed.ncbi.nlm.nih.gov/35060381"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.1c01484","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.1c01484","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049304791","display_name":"Xiaocong Wang","orcid":"https://orcid.org/0000-0002-5387-7389"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaocong Wang","raw_affiliation_strings":["Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, Hubei, China"],"raw_orcid":"https://orcid.org/0000-0002-5387-7389","affiliations":[{"raw_affiliation_string":"Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, Hubei, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055919075","display_name":"Lihua Bie","orcid":"https://orcid.org/0000-0002-3334-493X"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lihua Bie","raw_affiliation_strings":["Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, Hubei, China"],"raw_orcid":"https://orcid.org/0000-0002-3334-493X","affiliations":[{"raw_affiliation_string":"Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, Hubei, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100647288","display_name":"Jun Gao","orcid":"https://orcid.org/0000-0002-6692-1828"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Gao","raw_affiliation_strings":["Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, Hubei, China"],"raw_orcid":"https://orcid.org/0000-0002-6692-1828","affiliations":[{"raw_affiliation_string":"Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, Hubei, China","institution_ids":["https://openalex.org/I204823248"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5049304791"],"corresponding_institution_ids":["https://openalex.org/I204823248"],"apc_list":null,"apc_paid":null,"fwci":1.3212,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.78731979,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"62","issue":"3","first_page":"656","last_page":"667"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/heparan-sulfate","display_name":"Heparan sulfate","score":0.6842324733734131},{"id":"https://openalex.org/keywords/angiotensin-converting-enzyme-2","display_name":"Angiotensin-converting enzyme 2","score":0.6294031739234924},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.5711259841918945},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.5560431480407715},{"id":"https://openalex.org/keywords/cofactor","display_name":"Cofactor","score":0.528888463973999},{"id":"https://openalex.org/keywords/spike","display_name":"Spike (software development)","score":0.5061556696891785},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.49913763999938965},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.4761878550052643},{"id":"https://openalex.org/keywords/heparin","display_name":"Heparin","score":0.4682741165161133},{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.37534552812576294},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.1353546679019928},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.10082224011421204},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.0818554162979126},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.07382431626319885}],"concepts":[{"id":"https://openalex.org/C2778041096","wikidata":"https://www.wikidata.org/wiki/Q424668","display_name":"Heparan sulfate","level":3,"score":0.6842324733734131},{"id":"https://openalex.org/C2775946041","wikidata":"https://www.wikidata.org/wiki/Q14875321","display_name":"Angiotensin-converting enzyme 2","level":5,"score":0.6294031739234924},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.5711259841918945},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.5560431480407715},{"id":"https://openalex.org/C197957613","wikidata":"https://www.wikidata.org/wiki/Q407280","display_name":"Cofactor","level":3,"score":0.528888463973999},{"id":"https://openalex.org/C2781390188","wikidata":"https://www.wikidata.org/wiki/Q25203449","display_name":"Spike (software development)","level":2,"score":0.5061556696891785},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.49913763999938965},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.4761878550052643},{"id":"https://openalex.org/C2777557582","wikidata":"https://www.wikidata.org/wiki/Q190016","display_name":"Heparin","level":2,"score":0.4682741165161133},{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.37534552812576294},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.1353546679019928},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.10082224011421204},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0818554162979126},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.07382431626319885},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.0},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000809","descriptor_name":"Angiotensins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000809","descriptor_name":"Angiotensins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000809","descriptor_name":"Angiotensins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006493","descriptor_name":"Heparin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006493","descriptor_name":"Heparin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006493","descriptor_name":"Heparin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006497","descriptor_name":"Heparitin Sulfate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006497","descriptor_name":"Heparan Sulfate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006497","descriptor_name":"Heparitin Sulfate","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064370","descriptor_name":"Spike Glycoprotein, Coronavirus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064370","descriptor_name":"Spike Glycoprotein, Coronavirus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064370","descriptor_name":"Spike Glycoprotein, Coronavirus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1021/acs.jcim.1c01484","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.1c01484","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:35060381","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35060381","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.47999998927116394,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G4726991314","display_name":null,"funder_award_id":"21873034","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4938124469","display_name":null,"funder_award_id":"2662018JC027","funder_id":"https://openalex.org/F4320329878","funder_display_name":"Central University Basic Research Fund of China"},{"id":"https://openalex.org/G7049252960","display_name":null,"funder_award_id":"2662020XXPY02","funder_id":"https://openalex.org/F4320329878","funder_display_name":"Central University Basic Research Fund of China"},{"id":"https://openalex.org/G953925433","display_name":null,"funder_award_id":"21977033","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320329878","display_name":"Central University Basic Research Fund of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":57,"referenced_works":["https://openalex.org/W1968984443","https://openalex.org/W1975580333","https://openalex.org/W1982423863","https://openalex.org/W1988870473","https://openalex.org/W1991204330","https://openalex.org/W1999330037","https://openalex.org/W2004822259","https://openalex.org/W2035266068","https://openalex.org/W2086068973","https://openalex.org/W2098943363","https://openalex.org/W2103636724","https://openalex.org/W2121886286","https://openalex.org/W2127588291","https://openalex.org/W2142868265","https://openalex.org/W2164270482","https://openalex.org/W2166765429","https://openalex.org/W2231215589","https://openalex.org/W2294531873","https://openalex.org/W2507509061","https://openalex.org/W2513547424","https://openalex.org/W2804822363","https://openalex.org/W2886656117","https://openalex.org/W2890505952","https://openalex.org/W2891714892","https://openalex.org/W2946482289","https://openalex.org/W2989052455","https://openalex.org/W3001897055","https://openalex.org/W3004318991","https://openalex.org/W3007092620","https://openalex.org/W3007643904","https://openalex.org/W3009335299","https://openalex.org/W3011127849","https://openalex.org/W3011701533","https://openalex.org/W3013800395","https://openalex.org/W3014067025","https://openalex.org/W3015190630","https://openalex.org/W3021183041","https://openalex.org/W3023376619","https://openalex.org/W3027603208","https://openalex.org/W3029342396","https://openalex.org/W3032445823","https://openalex.org/W3041474915","https://openalex.org/W3042332408","https://openalex.org/W3044914269","https://openalex.org/W3047003416","https://openalex.org/W3065141030","https://openalex.org/W3083130172","https://openalex.org/W3085153423","https://openalex.org/W3086603362","https://openalex.org/W3110752337","https://openalex.org/W3115315281","https://openalex.org/W3127988947","https://openalex.org/W3130583627","https://openalex.org/W3132930898","https://openalex.org/W3168566956","https://openalex.org/W3175121349","https://openalex.org/W3181877484"],"related_works":["https://openalex.org/W2024793493","https://openalex.org/W2937682530","https://openalex.org/W4235239922","https://openalex.org/W2266671018","https://openalex.org/W3016164001","https://openalex.org/W2026251112","https://openalex.org/W2606892147","https://openalex.org/W121456015","https://openalex.org/W2060708903","https://openalex.org/W3025872456"],"abstract_inverted_index":{"The":[0,91,121,139],"viral":[1],"entry":[2],"process":[3],"of":[4,39,47,57,64,149,167,176],"the":[5,20,35,40,45,48,51,54,71,88,95,99,106,129,133,136,142,147,152,157,164,168,174,181,190,208],"novel":[6],"severe":[7],"acute":[8],"respiratory":[9],"syndrome":[10],"coronavirus":[11],"2":[12,31],"(SARS-CoV-2)":[13],"requires":[14],"heparin":[15],"and":[16,101,109,172,192,200],"heparan":[17],"sulfates":[18],"from":[19,105],"cell":[21],"surface,":[22],"functioning":[23],"as":[24],"a":[25,160],"cofactor":[26,89,205],"for":[27,33,86,116,123,195],"human":[28],"angiotensin-converting":[29],"enzyme":[30],"(ACE2)":[32],"recognizing":[34],"receptor-binding":[36],"domain":[37],"(RBD)":[38],"spike":[41],"(S)":[42],"protein":[43],"on":[44,189],"surface":[46],"virion.":[49],"In":[50],"present":[52],"study,":[53],"binding":[55,73,118,137,154,170],"poses":[56],"an":[58,111],"oligosaccharide":[59],"with":[60,125,141,180,198],"four":[61],"repeating":[62],"units":[63],"GlcNS6S-IdoA2S":[65],"(octa)":[66],"predicted":[67],"by":[68],"Vina-Carb":[69],"in":[70,77,94,128,135,151,159,207],"RBD":[72,153,169,199],"site":[74,155],"were":[75],"employed":[76],"molecular":[78,92],"dynamics":[79],"(MD)":[80],"simulations":[81,97],"to":[82,119],"provide":[83],"atomic":[84,191],"details":[85,194],"studying":[87],"mechanism.":[90],"model":[93,122],"MD":[96],"reproduced":[98],"length-":[100],"sequence-dependent":[102],"behavior":[103],"observed":[104],"microarray":[107],"experiments":[108],"revealed":[110],"important":[112],"planar":[113],"U-turn":[114],"shape":[115,127],"HP/HS":[117,196],"RBD.":[120],"octa":[124,150],"this":[126,177],"ACE2\u2013RBD":[130,143,209],"complex":[131,144],"enhanced":[132],"interactions":[134],"interface.":[138],"comparisons":[140],"suggested":[145],"that":[146],"presence":[148],"blocked":[156],"movements":[158],"loop":[161,178],"region":[162,179],"at":[163],"distal":[165],"end":[166],"interface":[171],"promoted":[173],"contacts":[175],"ACE2":[182],"N-terminus":[183],"helix.":[184],"This":[185],"study":[186],"shed":[187],"light":[188],"dynamic":[193],"interacting":[197],"provided":[201],"insights":[202],"into":[203],"their":[204],"role":[206],"interactions.":[210]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":3}],"updated_date":"2026-07-21T08:15:58.654021","created_date":"2025-10-10T00:00:00"}
