{"id":"https://openalex.org/W3174146346","doi":"https://doi.org/10.1021/acs.jcim.1c00414","title":"All-Atom Simulations Reveal a Key Interaction Network in the HLA-E/NKG2A/CD94 Immune Complex Fine-Tuned by the Nonameric Peptide","display_name":"All-Atom Simulations Reveal a Key Interaction Network in the HLA-E/NKG2A/CD94 Immune Complex Fine-Tuned by the Nonameric Peptide","publication_year":2021,"publication_date":"2021-07-01","ids":{"openalex":"https://openalex.org/W3174146346","doi":"https://doi.org/10.1021/acs.jcim.1c00414","mag":"3174146346","pmid":"https://pubmed.ncbi.nlm.nih.gov/34196180"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.1c00414","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.1c00414","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.1c00414","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.1c00414","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049303689","display_name":"Eva Pra\u0161nikar","orcid":"https://orcid.org/0000-0002-6537-165X"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]},{"id":"https://openalex.org/I4210152560","display_name":"National Institute of Chemistry","ror":"https://ror.org/050mac570","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210152560"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Eva Pra\u0161nikar","raw_affiliation_strings":["Graduate School of Biomedicine, Faculty of Medicine, University of Ljubljana, Vrazov trg 2, 1000 Ljubljana, Slovenia","National Institute of Chemistry, Hajdrihova 19, 1000 Ljubljana, Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate School of Biomedicine, Faculty of Medicine, University of Ljubljana, Vrazov trg 2, 1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova 19, 1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005346086","display_name":"Andrej Perdih","orcid":"https://orcid.org/0000-0002-6645-9231"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]},{"id":"https://openalex.org/I4210152560","display_name":"National Institute of Chemistry","ror":"https://ror.org/050mac570","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210152560"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Andrej Perdih","raw_affiliation_strings":["Faculty of Pharmacy, University of Ljubljana, A\u0161ker\u010deva 7, 1000 Ljubljana, Slovenia","National Institute of Chemistry, Hajdrihova 19, 1000 Ljubljana, Slovenia"],"raw_orcid":"https://orcid.org/0000-0002-6645-9231","affiliations":[{"raw_affiliation_string":"Faculty of Pharmacy, University of Ljubljana, A\u0161ker\u010deva 7, 1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova 19, 1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088791460","display_name":"Jure Bori\u0161ek","orcid":"https://orcid.org/0000-0003-3417-0940"},"institutions":[{"id":"https://openalex.org/I4210152560","display_name":"National Institute of Chemistry","ror":"https://ror.org/050mac570","country_code":"SI","type":"facility","lineage":["https://openalex.org/I4210152560"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Jure Bori\u0161ek","raw_affiliation_strings":["National Institute of Chemistry, Hajdrihova 19, 1000 Ljubljana, Slovenia"],"raw_orcid":"https://orcid.org/0000-0003-3417-0940","affiliations":[{"raw_affiliation_string":"National Institute of Chemistry, Hajdrihova 19, 1000 Ljubljana, Slovenia","institution_ids":["https://openalex.org/I4210152560"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.491,"has_fulltext":false,"cited_by_count":9,"citation_normalized_percentile":{"value":0.60164664,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"61","issue":"7","first_page":"3593","last_page":"3603"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11020","display_name":"Immune Cell Function and Interaction","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11020","display_name":"Immune Cell Function and Interaction","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11313","display_name":"Immune cells in cancer","score":0.9732999801635742,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10031","display_name":"T-cell and B-cell Immunology","score":0.9395999908447266,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/immunological-synapse","display_name":"Immunological synapse","score":0.6725209355354309},{"id":"https://openalex.org/keywords/ligand","display_name":"Ligand (biochemistry)","score":0.5732598900794983},{"id":"https://openalex.org/keywords/innate-immune-system","display_name":"Innate immune system","score":0.5577998757362366},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.5327983498573303},{"id":"https://openalex.org/keywords/receptor","display_name":"Receptor","score":0.5324510335922241},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.4965088963508606},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.4686317443847656},{"id":"https://openalex.org/keywords/peptide","display_name":"Peptide","score":0.4578584134578705},{"id":"https://openalex.org/keywords/t-cell-receptor","display_name":"T-cell receptor","score":0.453194260597229},{"id":"https://openalex.org/keywords/t-cell","display_name":"T cell","score":0.4040085971355438},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.33183449506759644},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.20612627267837524},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.1744060218334198}],"concepts":[{"id":"https://openalex.org/C9756297","wikidata":"https://www.wikidata.org/wiki/Q126223","display_name":"Immunological synapse","level":5,"score":0.6725209355354309},{"id":"https://openalex.org/C116569031","wikidata":"https://www.wikidata.org/wiki/Q899107","display_name":"Ligand (biochemistry)","level":3,"score":0.5732598900794983},{"id":"https://openalex.org/C136449434","wikidata":"https://www.wikidata.org/wiki/Q428253","display_name":"Innate immune system","level":3,"score":0.5577998757362366},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.5327983498573303},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.5324510335922241},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.4965088963508606},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.4686317443847656},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.4578584134578705},{"id":"https://openalex.org/C19317047","wikidata":"https://www.wikidata.org/wiki/Q412037","display_name":"T-cell receptor","level":4,"score":0.453194260597229},{"id":"https://openalex.org/C2776090121","wikidata":"https://www.wikidata.org/wiki/Q193529","display_name":"T cell","level":3,"score":0.4040085971355438},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.33183449506759644},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.20612627267837524},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.1744060218334198}],"mesh":[{"descriptor_ui":"D000097625","descriptor_name":"HLA-E Antigens","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000097625","descriptor_name":"HLA-E Antigens","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000097625","descriptor_name":"HLA-E Antigens","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000097625","descriptor_name":"HLA-E Antigens","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000936","descriptor_name":"Antigen-Antibody Complex","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007694","descriptor_name":"Killer Cells, Natural","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007694","descriptor_name":"Killer Cells, Natural","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007694","descriptor_name":"Killer Cells, Natural","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007694","descriptor_name":"Killer Cells, Natural","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015395","descriptor_name":"Histocompatibility Antigens Class I","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015395","descriptor_name":"Histocompatibility Antigens Class I","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015395","descriptor_name":"Histocompatibility Antigens Class I","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015395","descriptor_name":"Histocompatibility Antigens Class I","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051920","descriptor_name":"NK Cell Lectin-Like Receptor Subfamily D","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051920","descriptor_name":"NK Cell Lectin-Like Receptor Subfamily D","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051920","descriptor_name":"NK Cell Lectin-Like Receptor Subfamily D","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051920","descriptor_name":"NK Cell Lectin-Like Receptor Subfamily D","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055654","descriptor_name":"NK Cell Lectin-Like Receptor Subfamily C","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055654","descriptor_name":"NK Cell Lectin-Like Receptor Subfamily C","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055654","descriptor_name":"NK Cell Lectin-Like Receptor Subfamily C","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055654","descriptor_name":"NK Cell Lectin-Like Receptor Subfamily C","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1021/acs.jcim.1c00414","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.1c00414","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.1c00414","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:34196180","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34196180","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8389527","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8389527","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Chem Inf Model","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1021/acs.jcim.1c00414","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jcim.1c00414","pdf_url":"https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.1c00414","source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.7900000214576721}],"awards":[{"id":"https://openalex.org/G1440602725","display_name":null,"funder_award_id":"P1-0017","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"},{"id":"https://openalex.org/G383630959","display_name":null,"funder_award_id":"39011","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"},{"id":"https://openalex.org/G4524211914","display_name":null,"funder_award_id":"P1-0012","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"}],"funders":[{"id":"https://openalex.org/F4320322554","display_name":"Javna Agencija za Raziskovalno Dejavnost RS","ror":"https://ror.org/059bp8k51"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3174146346.pdf"},"referenced_works_count":46,"referenced_works":["https://openalex.org/W1549357029","https://openalex.org/W1605872885","https://openalex.org/W1859347062","https://openalex.org/W1912548981","https://openalex.org/W1914169225","https://openalex.org/W1970293699","https://openalex.org/W1976499671","https://openalex.org/W1977339743","https://openalex.org/W1980021547","https://openalex.org/W1980376659","https://openalex.org/W1994255893","https://openalex.org/W1994748539","https://openalex.org/W1994778680","https://openalex.org/W1994941561","https://openalex.org/W2029667189","https://openalex.org/W2034326919","https://openalex.org/W2035266068","https://openalex.org/W2037319728","https://openalex.org/W2039266996","https://openalex.org/W2047399603","https://openalex.org/W2054150065","https://openalex.org/W2070214550","https://openalex.org/W2095529707","https://openalex.org/W2096119021","https://openalex.org/W2106140689","https://openalex.org/W2116171543","https://openalex.org/W2122745552","https://openalex.org/W2123182960","https://openalex.org/W2144891041","https://openalex.org/W2160451368","https://openalex.org/W2171268876","https://openalex.org/W2193792657","https://openalex.org/W2404280981","https://openalex.org/W2510638623","https://openalex.org/W2561396377","https://openalex.org/W2591114726","https://openalex.org/W2756061744","https://openalex.org/W2783500818","https://openalex.org/W2808197171","https://openalex.org/W2887575266","https://openalex.org/W2913289941","https://openalex.org/W2948309692","https://openalex.org/W2966955844","https://openalex.org/W2987352852","https://openalex.org/W3117392781","https://openalex.org/W3123419925"],"related_works":["https://openalex.org/W2747317233","https://openalex.org/W1613939252","https://openalex.org/W4210367489","https://openalex.org/W2025954334","https://openalex.org/W2023224847","https://openalex.org/W2159243008","https://openalex.org/W2078513867","https://openalex.org/W2021750684","https://openalex.org/W2067043854","https://openalex.org/W3204085801"],"abstract_inverted_index":{"Natural":[0],"killer":[1],"(NK)":[2],"cells,":[3],"an":[4,135],"important":[5,170],"part":[6],"of":[7,17,40,51,70,81,94,101,138,167,181,193,209,216],"the":[8,38,49,71,99,109,124,127,143,151,156,165,168,173,178,182],"innate":[9],"immune":[10,96],"system,":[11],"can":[12],"clear":[13],"a":[14,85,114,191],"wide":[15],"variety":[16,192],"pathological":[18],"challenges,":[19],"including":[20,202],"tumor,":[21],"senescent,":[22],"and":[23,31,37,44,61,84,116,129,188,205,207],"virally":[24],"infected":[25],"cells.":[26],"They":[27],"express":[28],"various":[29],"activating":[30],"inhibitory":[32,72],"receptors":[33,73],"on":[34,48],"their":[35],"surface,":[36],"balance":[39],"interactions":[41,125,171],"between":[42,126],"them":[43],"specific":[45],"ligands":[46],"displayed":[47],"surface":[50],"target":[52,62],"cells":[53,211],"is":[54,68],"critical":[55],"for":[56,199],"NK":[57,110,157,184],"cell":[58,63,111,158,185],"cytolytic":[59],"function":[60],"protection.":[64],"The":[65],"CD94/NKG2A":[66],"heterodimer":[67],"one":[69],"that":[74,107,150],"interacts":[75],"with":[76,172,213],"its":[77,161],"trimeric":[78],"ligand":[79,130],"consisting":[80],"HLA-E,":[82],"\u03b22m,":[83],"nonameric":[86,145],"peptide.":[87,146],"Here,":[88],"multi-microsecond-long":[89],"all-atom":[90],"molecular":[91,105],"dynamics":[92],"simulations":[93],"eight":[95],"complexes":[97],"elucidate":[98],"subtleties":[100],"receptor":[102,128,152],"(NKG2A/CD94)-ligand":[103],"(HLA-E/\u03b22m/peptide)":[104],"recognition":[106],"mediate":[108],"protection":[112,186],"from":[113],"geometric":[115],"energetic":[117],"perspective.":[118],"We":[119,147],"identify":[120],"key":[121],"differences":[122],"in":[123,195],"complexes,":[131],"which":[132],"are":[133],"via":[134],"entangled":[136],"network":[137],"hydrogen":[139],"bonds":[140],"fine-tuned":[141],"by":[142],"ligand-specific":[144],"further":[148],"reveal":[149],"protein":[153],"NKG2A":[154],"regulates":[155],"activity,":[159],"while":[160],"CD94":[162],"partner":[163],"forms":[164],"majority":[166],"energetically":[169],"ligand.":[174],"This":[175],"knowledge":[176],"rationalizes":[177],"atomistic":[179],"details":[180],"fundamental":[183],"mechanism":[187],"may":[189],"enable":[190],"opportunities":[194],"rational-based":[196],"drug":[197],"discovery":[198],"diverse":[200],"pathologies":[201],"viral":[203],"infections":[204],"cancer":[206],"elimination":[208],"senescent":[210],"associated":[212],"potential":[214],"treatment":[215],"many":[217],"age-related":[218],"diseases.":[219]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
