{"id":"https://openalex.org/W3175029591","doi":"https://doi.org/10.1021/acs.jcim.1c00175","title":"Computational Methods and Tools in Antimicrobial Peptide Research","display_name":"Computational Methods and Tools in Antimicrobial Peptide Research","publication_year":2021,"publication_date":"2021-06-24","ids":{"openalex":"https://openalex.org/W3175029591","doi":"https://doi.org/10.1021/acs.jcim.1c00175","mag":"3175029591","pmid":"https://pubmed.ncbi.nlm.nih.gov/34165973"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.1c00175","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.1c00175","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043881203","display_name":"Pietro G. A. Aronica","orcid":"https://orcid.org/0000-0002-2927-8378"},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]},{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Pietro G.A. Aronica","raw_affiliation_strings":["Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","institution_ids":["https://openalex.org/I115228651","https://openalex.org/I4210148498"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054162858","display_name":"Lauren Reid","orcid":"https://orcid.org/0000-0001-8327-0927"},"institutions":[{"id":"https://openalex.org/I4210103439","display_name":"East Cheshire NHS Trust","ror":"https://ror.org/01j64ar73","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I4210103439"]},{"id":"https://openalex.org/I43439940","display_name":"University of Southampton","ror":"https://ror.org/01ryk1543","country_code":"GB","type":"education","lineage":["https://openalex.org/I43439940"]},{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]},{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]}],"countries":["GB","SG"],"is_corresponding":false,"raw_author_name":"Lauren M. Reid","raw_affiliation_strings":["Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","MedChemica Ltd, Alderley Park, Macclesfield, Cheshire, U.K. SK10 4TG","School of Chemistry, University of Southampton, Highfield Southampton, Hampshire, U.K. SO17 1BJ"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","institution_ids":["https://openalex.org/I115228651","https://openalex.org/I4210148498"]},{"raw_affiliation_string":"MedChemica Ltd, Alderley Park, Macclesfield, Cheshire, U.K. SK10 4TG","institution_ids":["https://openalex.org/I4210103439"]},{"raw_affiliation_string":"School of Chemistry, University of Southampton, Highfield Southampton, Hampshire, U.K. SO17 1BJ","institution_ids":["https://openalex.org/I43439940"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008371804","display_name":"Nirali Desai","orcid":null},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]},{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]},{"id":"https://openalex.org/I52527943","display_name":"Ahmedabad University","ror":"https://ror.org/02swff503","country_code":"IN","type":"education","lineage":["https://openalex.org/I52527943"]}],"countries":["IN","SG"],"is_corresponding":false,"raw_author_name":"Nirali Desai","raw_affiliation_strings":["Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","Division of Biological and Life Sciences, Ahmedabad University, Central Campus, Ahmedabad, Gujarat, India 380009"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","institution_ids":["https://openalex.org/I115228651","https://openalex.org/I4210148498"]},{"raw_affiliation_string":"Division of Biological and Life Sciences, Ahmedabad University, Central Campus, Ahmedabad, Gujarat, India 380009","institution_ids":["https://openalex.org/I52527943"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100368371","display_name":"Jianguo Li","orcid":"https://orcid.org/0000-0002-5544-6451"},"institutions":[{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]},{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]},{"id":"https://openalex.org/I4210116917","display_name":"Singapore Eye Research Institute","ror":"https://ror.org/02crz6e12","country_code":"SG","type":"facility","lineage":["https://openalex.org/I4210116917"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Jianguo Li","raw_affiliation_strings":["Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","Singapore Eye Research Institute, 20 College Road Discovery Tower, Singapore 169856"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","institution_ids":["https://openalex.org/I115228651","https://openalex.org/I4210148498"]},{"raw_affiliation_string":"Singapore Eye Research Institute, 20 College Road Discovery Tower, Singapore 169856","institution_ids":["https://openalex.org/I4210116917"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016215460","display_name":"Stephen Fox","orcid":"https://orcid.org/0000-0002-3447-4832"},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]},{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Stephen J. Fox","raw_affiliation_strings":["Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","institution_ids":["https://openalex.org/I115228651","https://openalex.org/I4210148498"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063684314","display_name":"Shilpa Yadahalli","orcid":"https://orcid.org/0000-0003-1093-1127"},"institutions":[{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]},{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Shilpa Yadahalli","raw_affiliation_strings":["Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","institution_ids":["https://openalex.org/I115228651","https://openalex.org/I4210148498"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067820273","display_name":"Jonathan W. Essex","orcid":"https://orcid.org/0000-0003-2639-2746"},"institutions":[{"id":"https://openalex.org/I43439940","display_name":"University of Southampton","ror":"https://ror.org/01ryk1543","country_code":"GB","type":"education","lineage":["https://openalex.org/I43439940"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Jonathan W. Essex","raw_affiliation_strings":["School of Chemistry, University of Southampton, Highfield Southampton, Hampshire, U.K. SO17 1BJ"],"affiliations":[{"raw_affiliation_string":"School of Chemistry, University of Southampton, Highfield Southampton, Hampshire, U.K. SO17 1BJ","institution_ids":["https://openalex.org/I43439940"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045760818","display_name":"Chandra Verma","orcid":"https://orcid.org/0000-0003-0733-9798"},"institutions":[{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]},{"id":"https://openalex.org/I4210148498","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I2801752549","https://openalex.org/I4210148498"]},{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]},{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Chandra S. Verma","raw_affiliation_strings":["Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, 117543 Singapore","School of Biological Sciences, Nanyang Technological University, 50 Nanyang Drive, 637551 Singapore"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute at A*STAR (Agency for Science, Technology and Research), 30 Biopolis Street, #07-01 Matrix, Singapore 138671","institution_ids":["https://openalex.org/I115228651","https://openalex.org/I4210148498"]},{"raw_affiliation_string":"Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, 117543 Singapore","institution_ids":["https://openalex.org/I165932596"]},{"raw_affiliation_string":"School of Biological Sciences, Nanyang Technological University, 50 Nanyang Drive, 637551 Singapore","institution_ids":["https://openalex.org/I172675005"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5043881203"],"corresponding_institution_ids":["https://openalex.org/I115228651","https://openalex.org/I4210148498"],"apc_list":null,"apc_paid":null,"fwci":11.1103,"has_fulltext":false,"cited_by_count":118,"citation_normalized_percentile":{"value":0.99170383,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"61","issue":"7","first_page":"3172","last_page":"3196"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13326","display_name":"Biochemical and Structural Characterization","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9889000058174133,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6206009387969971},{"id":"https://openalex.org/keywords/class","display_name":"Class (philosophy)","score":0.537679135799408},{"id":"https://openalex.org/keywords/server","display_name":"Server","score":0.49065151810646057},{"id":"https://openalex.org/keywords/antimicrobial-peptides","display_name":"Antimicrobial peptides","score":0.4742664098739624},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.46980342268943787},{"id":"https://openalex.org/keywords/antimicrobial","display_name":"Antimicrobial","score":0.45619186758995056},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.42934104800224304},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.4158465266227722},{"id":"https://openalex.org/keywords/risk-analysis","display_name":"Risk analysis (engineering)","score":0.32161253690719604},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.26918846368789673},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2686023712158203},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.22599828243255615},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.18100276589393616},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.10854563117027283},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.09009099006652832}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6206009387969971},{"id":"https://openalex.org/C2777212361","wikidata":"https://www.wikidata.org/wiki/Q5127848","display_name":"Class (philosophy)","level":2,"score":0.537679135799408},{"id":"https://openalex.org/C93996380","wikidata":"https://www.wikidata.org/wiki/Q44127","display_name":"Server","level":2,"score":0.49065151810646057},{"id":"https://openalex.org/C540938839","wikidata":"https://www.wikidata.org/wiki/Q1201508","display_name":"Antimicrobial peptides","level":3,"score":0.4742664098739624},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.46980342268943787},{"id":"https://openalex.org/C4937899","wikidata":"https://www.wikidata.org/wiki/Q68541106","display_name":"Antimicrobial","level":2,"score":0.45619186758995056},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.42934104800224304},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.4158465266227722},{"id":"https://openalex.org/C112930515","wikidata":"https://www.wikidata.org/wiki/Q4389547","display_name":"Risk analysis (engineering)","level":1,"score":0.32161253690719604},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.26918846368789673},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2686023712158203},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.22599828243255615},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.18100276589393616},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.10854563117027283},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.09009099006652832}],"mesh":[{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023181","descriptor_name":"Antimicrobial Cationic Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023181","descriptor_name":"Antimicrobial Cationic Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023181","descriptor_name":"Antimicrobial Cationic Peptides","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052899","descriptor_name":"Pore Forming Cytotoxic Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D052899","descriptor_name":"Pore Forming Cytotoxic Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D052899","descriptor_name":"Pore Forming Cytotoxic Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1021/acs.jcim.1c00175","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.1c00175","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:34165973","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34165973","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null},{"id":"pmh:oai:eprints.soton.ac.uk:450480","is_oa":false,"landing_page_url":"https://eprints.soton.ac.uk/450480/1/AMP_Review.docx","pdf_url":null,"source":{"id":"https://openalex.org/S4306401019","display_name":"ePrints Soton (University of Southampton)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I43439940","host_organization_name":"University of Southampton","host_organization_lineage":["https://openalex.org/I43439940"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Review"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6649061441","display_name":null,"funder_award_id":"H17/01/a0/010","funder_id":"https://openalex.org/F4320334741","funder_display_name":"Bioinformatics Institute"}],"funders":[{"id":"https://openalex.org/F4320334741","display_name":"Bioinformatics Institute","ror":"https://ror.org/044w3nw43"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":311,"referenced_works":["https://openalex.org/W79479924","https://openalex.org/W186617319","https://openalex.org/W1499450468","https://openalex.org/W1516030996","https://openalex.org/W1548178570","https://openalex.org/W1556677948","https://openalex.org/W1578884036","https://openalex.org/W1594526597","https://openalex.org/W1731081199","https://openalex.org/W1848835470","https://openalex.org/W1899856807","https://openalex.org/W1945664147","https://openalex.org/W1962761379","https://openalex.org/W1968751925","https://openalex.org/W1969231606","https://openalex.org/W1970120604","https://openalex.org/W1971024387","https://openalex.org/W1971042231","https://openalex.org/W1971280976","https://openalex.org/W1971891360","https://openalex.org/W1973813641","https://openalex.org/W1976658598","https://openalex.org/W1977317129","https://openalex.org/W1978712551","https://openalex.org/W1978924267","https://openalex.org/W1983316917","https://openalex.org/W1984018517","https://openalex.org/W1984185958","https://openalex.org/W1985533655","https://openalex.org/W1987134040","https://openalex.org/W1987684917","https://openalex.org/W1989306703","https://openalex.org/W1989642335","https://openalex.org/W1991360925","https://openalex.org/W1992450378","https://openalex.org/W1992603413","https://openalex.org/W1992718795","https://openalex.org/W1992899488","https://openalex.org/W1994880906","https://openalex.org/W1996355353","https://openalex.org/W1997152791","https://openalex.org/W1998064689","https://openalex.org/W1998084493","https://openalex.org/W1998539407","https://openalex.org/W2001353592","https://openalex.org/W2002930710","https://openalex.org/W2005114968","https://openalex.org/W2005820036","https://openalex.org/W2006400094","https://openalex.org/W2007313234","https://openalex.org/W2008708467","https://openalex.org/W2011284543","https://openalex.org/W2012289572","https://openalex.org/W2013150043","https://openalex.org/W2013674343","https://openalex.org/W2018358224","https://openalex.org/W2018859184","https://openalex.org/W2018984543","https://openalex.org/W2020084943","https://openalex.org/W2020465942","https://openalex.org/W2020815466","https://openalex.org/W2023307888","https://openalex.org/W2024293024","https://openalex.org/W2026120904","https://openalex.org/W2026482455","https://openalex.org/W2027839322","https://openalex.org/W2029476353","https://openalex.org/W2031025789","https://openalex.org/W2032932620","https://openalex.org/W2033757486","https://openalex.org/W2033853317","https://openalex.org/W2034041119","https://openalex.org/W2034070267","https://openalex.org/W2035167810","https://openalex.org/W2035664036","https://openalex.org/W2036108598","https://openalex.org/W2036135772","https://openalex.org/W2037492976","https://openalex.org/W2038302435","https://openalex.org/W2040484095","https://openalex.org/W2040809566","https://openalex.org/W2041652966","https://openalex.org/W2042350961","https://openalex.org/W2043614254","https://openalex.org/W2044231120","https://openalex.org/W2044750677","https://openalex.org/W2046704370","https://openalex.org/W2049902088","https://openalex.org/W2050469283","https://openalex.org/W2052144361","https://openalex.org/W2053248699","https://openalex.org/W2055088408","https://openalex.org/W2055154674","https://openalex.org/W2056232124","https://openalex.org/W2057120022","https://openalex.org/W2057681467","https://openalex.org/W2058156307","https://openalex.org/W2059136964","https://openalex.org/W2059764020","https://openalex.org/W2063375278","https://openalex.org/W2064440346","https://openalex.org/W2065581761","https://openalex.org/W2066951434","https://openalex.org/W2066956258","https://openalex.org/W2067402644","https://openalex.org/W2068934053","https://openalex.org/W2072777333","https://openalex.org/W2073865475","https://openalex.org/W2074313989","https://openalex.org/W2074988297","https://openalex.org/W2076713412","https://openalex.org/W2077706053","https://openalex.org/W2078169364","https://openalex.org/W2079468421","https://openalex.org/W2080831965","https://openalex.org/W2081090090","https://openalex.org/W2081724315","https://openalex.org/W2083416546","https://openalex.org/W2084845164","https://openalex.org/W2084878620","https://openalex.org/W2090277048","https://openalex.org/W2093962134","https://openalex.org/W2094170312","https://openalex.org/W2095036253","https://openalex.org/W2095805080","https://openalex.org/W2097099115","https://openalex.org/W2099700384","https://openalex.org/W2100355668","https://openalex.org/W2101234009","https://openalex.org/W2101549409","https://openalex.org/W2103083136","https://openalex.org/W2106842909","https://openalex.org/W2107050135","https://openalex.org/W2107758049","https://openalex.org/W2112862199","https://openalex.org/W2114247676","https://openalex.org/W2114283460","https://openalex.org/W2115622227","https://openalex.org/W2117618216","https://openalex.org/W2118817344","https://openalex.org/W2119821739","https://openalex.org/W2120348757","https://openalex.org/W2124901551","https://openalex.org/W2125652394","https://openalex.org/W2126682859","https://openalex.org/W2128607364","https://openalex.org/W2128768386","https://openalex.org/W2129507901","https://openalex.org/W2129939988","https://openalex.org/W2130387209","https://openalex.org/W2132631533","https://openalex.org/W2133425057","https://openalex.org/W2133603290","https://openalex.org/W2137209317","https://openalex.org/W2138021049","https://openalex.org/W2144181598","https://openalex.org/W2145639191","https://openalex.org/W2147454197","https://openalex.org/W2148131811","https://openalex.org/W2148472024","https://openalex.org/W2149040052","https://openalex.org/W2152380569","https://openalex.org/W2153187042","https://openalex.org/W2157873167","https://openalex.org/W2159936883","https://openalex.org/W2160780417","https://openalex.org/W2161647621","https://openalex.org/W2163316049","https://openalex.org/W2163915395","https://openalex.org/W2164487093","https://openalex.org/W2164582453","https://openalex.org/W2169796734","https://openalex.org/W2171559274","https://openalex.org/W2171584190","https://openalex.org/W2175270296","https://openalex.org/W2179303225","https://openalex.org/W2186478961","https://openalex.org/W2213165966","https://openalex.org/W2215623008","https://openalex.org/W2216946510","https://openalex.org/W2233933882","https://openalex.org/W2269997062","https://openalex.org/W2275796694","https://openalex.org/W2293232984","https://openalex.org/W2314330043","https://openalex.org/W2317765000","https://openalex.org/W2319760302","https://openalex.org/W2322129872","https://openalex.org/W2323889349","https://openalex.org/W2335131132","https://openalex.org/W2339719866","https://openalex.org/W2345243989","https://openalex.org/W2363708275","https://openalex.org/W2413334978","https://openalex.org/W2414252767","https://openalex.org/W2414669751","https://openalex.org/W2417653920","https://openalex.org/W2434541788","https://openalex.org/W2463461150","https://openalex.org/W2465557450","https://openalex.org/W2472740360","https://openalex.org/W2507723354","https://openalex.org/W2507728244","https://openalex.org/W2511835277","https://openalex.org/W2515108670","https://openalex.org/W2552497246","https://openalex.org/W2553564063","https://openalex.org/W2555630365","https://openalex.org/W2562261325","https://openalex.org/W2566553664","https://openalex.org/W2588338493","https://openalex.org/W2588463038","https://openalex.org/W2588467130","https://openalex.org/W2591547609","https://openalex.org/W2599453033","https://openalex.org/W2604441786","https://openalex.org/W2615866880","https://openalex.org/W2727386932","https://openalex.org/W2733115055","https://openalex.org/W2734600091","https://openalex.org/W2738345393","https://openalex.org/W2743526077","https://openalex.org/W2746050631","https://openalex.org/W2749267305","https://openalex.org/W2750768573","https://openalex.org/W2765546463","https://openalex.org/W2766505332","https://openalex.org/W2766842911","https://openalex.org/W2766900003","https://openalex.org/W2767218508","https://openalex.org/W2780726324","https://openalex.org/W2783966224","https://openalex.org/W2784920021","https://openalex.org/W2790365194","https://openalex.org/W2791847156","https://openalex.org/W2791848964","https://openalex.org/W2792143480","https://openalex.org/W2793550642","https://openalex.org/W2795528841","https://openalex.org/W2796650346","https://openalex.org/W2797165643","https://openalex.org/W2800560927","https://openalex.org/W2801477363","https://openalex.org/W2801615077","https://openalex.org/W2801924301","https://openalex.org/W2803753687","https://openalex.org/W2804094929","https://openalex.org/W2804562858","https://openalex.org/W2806925866","https://openalex.org/W2811376207","https://openalex.org/W2884267293","https://openalex.org/W2886617086","https://openalex.org/W2888410902","https://openalex.org/W2890278855","https://openalex.org/W2890686817","https://openalex.org/W2892206109","https://openalex.org/W2892532266","https://openalex.org/W2895472103","https://openalex.org/W2896042375","https://openalex.org/W2896169578","https://openalex.org/W2898012054","https://openalex.org/W2898300440","https://openalex.org/W2900734997","https://openalex.org/W2901429330","https://openalex.org/W2905198474","https://openalex.org/W2905362478","https://openalex.org/W2906528872","https://openalex.org/W2913118142","https://openalex.org/W2914965474","https://openalex.org/W2915722416","https://openalex.org/W2917400972","https://openalex.org/W2917588365","https://openalex.org/W2917874934","https://openalex.org/W2918774261","https://openalex.org/W2919524056","https://openalex.org/W2940010972","https://openalex.org/W2940079543","https://openalex.org/W2942894473","https://openalex.org/W2944586980","https://openalex.org/W2945214237","https://openalex.org/W2948272581","https://openalex.org/W2948285055","https://openalex.org/W2951014987","https://openalex.org/W2953362071","https://openalex.org/W2955330427","https://openalex.org/W2961793981","https://openalex.org/W2963457143","https://openalex.org/W2965128681","https://openalex.org/W2965138703","https://openalex.org/W2967078590","https://openalex.org/W2967279075","https://openalex.org/W2967348616","https://openalex.org/W2969640213","https://openalex.org/W2978152179","https://openalex.org/W2981792167","https://openalex.org/W2982419518","https://openalex.org/W2984592028","https://openalex.org/W2991176535","https://openalex.org/W3036144909","https://openalex.org/W3039661786","https://openalex.org/W3046676513","https://openalex.org/W3087692915","https://openalex.org/W3094708881","https://openalex.org/W3096314220","https://openalex.org/W3097405028","https://openalex.org/W3098233350","https://openalex.org/W3105901899","https://openalex.org/W3107447438","https://openalex.org/W3139686515","https://openalex.org/W4210968711","https://openalex.org/W4211196614"],"related_works":["https://openalex.org/W1973192249","https://openalex.org/W2354039930","https://openalex.org/W4375855538","https://openalex.org/W2388831772","https://openalex.org/W3087020980","https://openalex.org/W2107525095","https://openalex.org/W4211241221","https://openalex.org/W2511368942","https://openalex.org/W2626999804","https://openalex.org/W4250004941"],"abstract_inverted_index":{"The":[0],"evolution":[1],"of":[2,16,41,50,65,78,94],"antibiotic-resistant":[3],"bacteria":[4],"is":[5,25,44,48],"an":[6,26],"ongoing":[7],"and":[8,18,33,56,68,88,90,97,112],"troubling":[9],"development":[10,57],"that":[11,20,43,49],"has":[12,58],"increased":[13],"the":[14,63,76,82,91,122],"number":[15],"diseases":[17],"infections":[19],"risk":[21],"going":[22],"untreated.":[23],"There":[24],"urgent":[27],"need":[28],"to":[29,35,80],"develop":[30],"alternative":[31],"strategies":[32],"treatments":[34],"address":[36],"this":[37],"issue.":[38],"One":[39],"class":[40],"molecules":[42],"attracting":[45],"significant":[46],"interest":[47],"antimicrobial":[51],"peptides":[52],"(AMPs).":[53],"Their":[54],"design":[55],"been":[59],"aided":[60],"considerably":[61],"by":[62],"applications":[64],"molecular":[66,98],"models,":[67],"we":[69],"review":[70,102],"these":[71],"here.":[72],"These":[73],"methods":[74],"include":[75],"use":[77],"tools":[79],"explore":[81],"relationships":[83],"between":[84],"their":[85],"structures,":[86],"dynamics,":[87],"functions":[89],"increasing":[92],"application":[93],"machine":[95],"learning":[96],"dynamics":[99],"simulations.":[100],"This":[101],"compiles":[103],"resources":[104],"such":[105],"as":[106],"AMP":[107],"databases,":[108],"AMP-related":[109],"web":[110],"servers,":[111],"commonly":[113],"used":[114],"techniques,":[115],"together":[116],"aimed":[117],"at":[118],"aiding":[119],"researchers":[120],"in":[121],"area":[123],"toward":[124],"complementing":[125],"experimental":[126],"studies":[127],"with":[128],"computational":[129],"approaches.":[130]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":33},{"year":2024,"cited_by_count":26},{"year":2023,"cited_by_count":26},{"year":2022,"cited_by_count":21},{"year":2021,"cited_by_count":6}],"updated_date":"2026-03-13T16:22:10.518609","created_date":"2025-10-10T00:00:00"}
