{"id":"https://openalex.org/W3040834925","doi":"https://doi.org/10.1021/acs.jcim.0c00232","title":"Tautomer Standardization in Chemical Databases: Deriving Business Rules from Quantum Chemistry","display_name":"Tautomer Standardization in Chemical Databases: Deriving Business Rules from Quantum Chemistry","publication_year":2020,"publication_date":"2020-07-09","ids":{"openalex":"https://openalex.org/W3040834925","doi":"https://doi.org/10.1021/acs.jcim.0c00232","mag":"3040834925","pmid":"https://pubmed.ncbi.nlm.nih.gov/32644790"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jcim.0c00232","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.0c00232","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101907495","display_name":"Christopher M. Baker","orcid":"https://orcid.org/0000-0002-9834-5351"},"institutions":[{"id":"https://openalex.org/I89199228","display_name":"Syngenta (Switzerland)","ror":"https://ror.org/05fqg8t87","country_code":"CH","type":"company","lineage":["https://openalex.org/I89199228"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Christopher M. Baker","raw_affiliation_strings":["Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K"],"affiliations":[{"raw_affiliation_string":"Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":["https://openalex.org/I89199228"]},{"raw_affiliation_string":"Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040068151","display_name":"Nathan J. Kidley","orcid":null},"institutions":[{"id":"https://openalex.org/I89199228","display_name":"Syngenta (Switzerland)","ror":"https://ror.org/05fqg8t87","country_code":"CH","type":"company","lineage":["https://openalex.org/I89199228"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Nathan J. Kidley","raw_affiliation_strings":["Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K"],"affiliations":[{"raw_affiliation_string":"Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":["https://openalex.org/I89199228"]},{"raw_affiliation_string":"Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000853150","display_name":"Konstantinos Papachristos","orcid":"https://orcid.org/0000-0002-4777-9088"},"institutions":[{"id":"https://openalex.org/I89199228","display_name":"Syngenta (Switzerland)","ror":"https://ror.org/05fqg8t87","country_code":"CH","type":"company","lineage":["https://openalex.org/I89199228"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Konstantinos Papachristos","raw_affiliation_strings":["Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K"],"affiliations":[{"raw_affiliation_string":"Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":["https://openalex.org/I89199228"]},{"raw_affiliation_string":"Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051652203","display_name":"Matthew Hotson","orcid":null},"institutions":[{"id":"https://openalex.org/I89199228","display_name":"Syngenta (Switzerland)","ror":"https://ror.org/05fqg8t87","country_code":"CH","type":"company","lineage":["https://openalex.org/I89199228"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Matthew Hotson","raw_affiliation_strings":["Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K"],"affiliations":[{"raw_affiliation_string":"Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":["https://openalex.org/I89199228"]},{"raw_affiliation_string":"Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016935405","display_name":"Rob Carson","orcid":null},"institutions":[{"id":"https://openalex.org/I89199228","display_name":"Syngenta (Switzerland)","ror":"https://ror.org/05fqg8t87","country_code":"CH","type":"company","lineage":["https://openalex.org/I89199228"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Rob Carson","raw_affiliation_strings":["Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K"],"affiliations":[{"raw_affiliation_string":"Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":["https://openalex.org/I89199228"]},{"raw_affiliation_string":"Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037944532","display_name":"David Gravestock","orcid":null},"institutions":[{"id":"https://openalex.org/I89199228","display_name":"Syngenta (Switzerland)","ror":"https://ror.org/05fqg8t87","country_code":"CH","type":"company","lineage":["https://openalex.org/I89199228"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"David Gravestock","raw_affiliation_strings":["Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K"],"affiliations":[{"raw_affiliation_string":"Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":["https://openalex.org/I89199228"]},{"raw_affiliation_string":"Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004518309","display_name":"Martin Pouliot","orcid":null},"institutions":[{"id":"https://openalex.org/I89199228","display_name":"Syngenta (Switzerland)","ror":"https://ror.org/05fqg8t87","country_code":"CH","type":"company","lineage":["https://openalex.org/I89199228"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Martin Pouliot","raw_affiliation_strings":["Syngenta Crop Protection, Schaffhauserstrasse, Stein CH-4332, Switzerland"],"affiliations":[{"raw_affiliation_string":"Syngenta Crop Protection, Schaffhauserstrasse, Stein CH-4332, Switzerland","institution_ids":["https://openalex.org/I89199228"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084440868","display_name":"Jim Harrison","orcid":null},"institutions":[{"id":"https://openalex.org/I4210134988","display_name":"Craft Technologies (United States)","ror":"https://ror.org/048gjaw83","country_code":"US","type":"company","lineage":["https://openalex.org/I4210134988"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jim Harrison","raw_affiliation_strings":["Datacraft Technologies, 110 Parkwood Place, Anstead, QLD 4070, Australia"],"affiliations":[{"raw_affiliation_string":"Datacraft Technologies, 110 Parkwood Place, Anstead, QLD 4070, Australia","institution_ids":["https://openalex.org/I4210134988"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061289388","display_name":"Alan F. Dowling","orcid":null},"institutions":[{"id":"https://openalex.org/I89199228","display_name":"Syngenta (Switzerland)","ror":"https://ror.org/05fqg8t87","country_code":"CH","type":"company","lineage":["https://openalex.org/I89199228"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Alan Dowling","raw_affiliation_strings":["Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K"],"affiliations":[{"raw_affiliation_string":"Syngenta, Jealott\u2019s Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":["https://openalex.org/I89199228"]},{"raw_affiliation_string":"Syngenta, Jealott's Hill International Research Centre, Bracknell, Berkshire RG42 6EY, U.K","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5101907495"],"corresponding_institution_ids":["https://openalex.org/I89199228"],"apc_list":null,"apc_paid":null,"fwci":1.533,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.82434914,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"60","issue":"8","first_page":"3781","last_page":"3791"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13297","display_name":"History and advancements in chemistry","score":0.98580002784729,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13297","display_name":"History and advancements in chemistry","score":0.98580002784729,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9660999774932861,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9589999914169312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/standardization","display_name":"Standardization","score":0.8579082489013672},{"id":"https://openalex.org/keywords/tautomer","display_name":"Tautomer","score":0.7962195873260498},{"id":"https://openalex.org/keywords/quantum-chemical","display_name":"Quantum chemical","score":0.6804553270339966},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5410690307617188},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.5038596987724304},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.39682212471961975},{"id":"https://openalex.org/keywords/organic-chemistry","display_name":"Organic chemistry","score":0.19107788801193237},{"id":"https://openalex.org/keywords/molecule","display_name":"Molecule","score":0.07582294940948486}],"concepts":[{"id":"https://openalex.org/C188087704","wikidata":"https://www.wikidata.org/wiki/Q369577","display_name":"Standardization","level":2,"score":0.8579082489013672},{"id":"https://openalex.org/C111233374","wikidata":"https://www.wikidata.org/wiki/Q334640","display_name":"Tautomer","level":2,"score":0.7962195873260498},{"id":"https://openalex.org/C2991951333","wikidata":"https://www.wikidata.org/wiki/Q188403","display_name":"Quantum chemical","level":3,"score":0.6804553270339966},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5410690307617188},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.5038596987724304},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.39682212471961975},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.19107788801193237},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.07582294940948486},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D007536","descriptor_name":"Isomerism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007536","descriptor_name":"Isomerism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D007536","descriptor_name":"Isomerism","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1021/acs.jcim.0c00232","is_oa":false,"landing_page_url":"https://doi.org/10.1021/acs.jcim.0c00232","pdf_url":null,"source":{"id":"https://openalex.org/S167262187","display_name":"Journal of Chemical Information and Modeling","issn_l":"1549-9596","issn":["1549-9596","1549-960X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Information and Modeling","raw_type":"journal-article"},{"id":"pmid:32644790","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32644790","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of chemical information and modeling","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5799999833106995,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":78,"referenced_works":["https://openalex.org/W1509926845","https://openalex.org/W1546956326","https://openalex.org/W1965995198","https://openalex.org/W1966509121","https://openalex.org/W1971761242","https://openalex.org/W1979459637","https://openalex.org/W1983283443","https://openalex.org/W1985644977","https://openalex.org/W1990724722","https://openalex.org/W1997151511","https://openalex.org/W2000815209","https://openalex.org/W2008732224","https://openalex.org/W2008734993","https://openalex.org/W2013023515","https://openalex.org/W2015080758","https://openalex.org/W2016455326","https://openalex.org/W2021832765","https://openalex.org/W2023182702","https://openalex.org/W2023271753","https://openalex.org/W2024674972","https://openalex.org/W2029583153","https://openalex.org/W2029654108","https://openalex.org/W2032842297","https://openalex.org/W2038080389","https://openalex.org/W2041610798","https://openalex.org/W2042129725","https://openalex.org/W2042678771","https://openalex.org/W2046336719","https://openalex.org/W2047245810","https://openalex.org/W2048563399","https://openalex.org/W2050226017","https://openalex.org/W2052723761","https://openalex.org/W2055410245","https://openalex.org/W2057069496","https://openalex.org/W2068171522","https://openalex.org/W2071066588","https://openalex.org/W2076018790","https://openalex.org/W2076056618","https://openalex.org/W2080257323","https://openalex.org/W2090996511","https://openalex.org/W2093226833","https://openalex.org/W2096729078","https://openalex.org/W2102110064","https://openalex.org/W2111005956","https://openalex.org/W2112844927","https://openalex.org/W2114003088","https://openalex.org/W2117825133","https://openalex.org/W2122709242","https://openalex.org/W2130243725","https://openalex.org/W2134289054","https://openalex.org/W2138758210","https://openalex.org/W2140796250","https://openalex.org/W2141017420","https://openalex.org/W2143981217","https://openalex.org/W2154033129","https://openalex.org/W2171325428","https://openalex.org/W2209568211","https://openalex.org/W2269633632","https://openalex.org/W2279263454","https://openalex.org/W2319902168","https://openalex.org/W2394108223","https://openalex.org/W2408556912","https://openalex.org/W2513545620","https://openalex.org/W2523800160","https://openalex.org/W2562677145","https://openalex.org/W2730519791","https://openalex.org/W2771732379","https://openalex.org/W2802519874","https://openalex.org/W2811350820","https://openalex.org/W2887459817","https://openalex.org/W2888792171","https://openalex.org/W2904369940","https://openalex.org/W2912818999","https://openalex.org/W2973634761","https://openalex.org/W3002554271","https://openalex.org/W3004704740","https://openalex.org/W3006394635","https://openalex.org/W4301085298"],"related_works":["https://openalex.org/W4387497383","https://openalex.org/W2948807893","https://openalex.org/W2778153218","https://openalex.org/W2748952813","https://openalex.org/W1531601525","https://openalex.org/W4391375266","https://openalex.org/W2105466274","https://openalex.org/W2006167331","https://openalex.org/W2036059374","https://openalex.org/W2323175946"],"abstract_inverted_index":{"Databases":[0],"of":[1,25,44,53,58,66,79,89,107,115],"small,":[2],"potentially":[3],"bioactive":[4],"molecules":[5],"are":[6,143,156],"ubiquitous":[7],"across":[8],"the":[9,23,42,51,63,67,73,77,105],"industry":[10],"and":[11,154],"academia.":[12],"Designed":[13],"such":[14],"that":[15,35,61,102,122,142,155],"each":[16],"unique":[17],"compound":[18],"should":[19],"appear":[20],"only":[21],"once,":[22],"multiplicity":[24],"ways":[26],"in":[27,69,144,151,161],"which":[28],"many":[29],"compounds":[30],"can":[31],"be":[32],"represented":[33],"means":[34],"these":[36],"databases":[37],"require":[38],"methods":[39],"for":[40,119,159],"standardizing":[41],"representation":[43],"chemistry.":[45],"This":[46],"is":[47],"commonly":[48],"achieved":[49],"through":[50],"use":[52,106,160],"\"Chemistry":[54],"Business":[55],"Rules\",":[56],"sets":[57],"predefined":[59],"rules":[60,82,118],"describe":[62],"\"house":[64],"style\"":[65],"database":[68],"question.":[70],"At":[71],"Syngenta,":[72],"historical":[74],"approach":[75],"to":[76,85,130,134],"design":[78],"chemistry":[80,109,116],"business":[81,117],"has":[83],"been":[84],"focus":[86],"on":[87,129],"consistency":[88],"representation,":[90],"with":[91,147],"chemical":[92],"relevance":[93],"given":[94],"secondary":[95],"consideration.":[96],"In":[97],"this":[98,138],"work,":[99],"we":[100,111],"overturn":[101],"convention.":[103],"Through":[104],"quantum":[108],"calculations,":[110],"define":[112],"a":[113],"set":[114],"tautomer":[120],"standardization":[121],"reproduces":[123],"gas-phase":[124],"energetic":[125],"preferences.":[126],"We":[127],"go":[128],"show":[131],"that,":[132],"compared":[133],"our":[135],"historic":[136],"approach,":[137],"method":[139],"yields":[140],"tautomers":[141],"better":[145,157],"agreement":[146],"those":[148],"observed":[149],"experimentally":[150],"condensed":[152],"phases":[153],"suited":[158],"predictive":[162],"models.":[163]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
