{"id":"https://openalex.org/W4409920969","doi":"https://doi.org/10.1016/j.tcs.2025.115279","title":"Levenshtein's sequence reconstruction problem and results for larger alphabet sizes","display_name":"Levenshtein's sequence reconstruction problem and results for larger alphabet sizes","publication_year":2025,"publication_date":"2025-04-29","ids":{"openalex":"https://openalex.org/W4409920969","doi":"https://doi.org/10.1016/j.tcs.2025.115279"},"language":"en","primary_location":{"id":"doi:10.1016/j.tcs.2025.115279","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.tcs.2025.115279","pdf_url":null,"source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1016/j.tcs.2025.115279","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019826820","display_name":"Ville Junnila","orcid":"https://orcid.org/0000-0002-6891-7902"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ville Junnila","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-6891-7902","affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009028313","display_name":"Tero Laihonen","orcid":"https://orcid.org/0000-0002-2688-2166"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tero Laihonen","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-2688-2166","affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5071276295","display_name":"Tuomo Lehtil\u00e4","orcid":"https://orcid.org/0000-0003-2940-8088"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tuomo Lehtil\u00e4","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0003-2940-8088","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":2880,"currency":"USD","value_usd":2880},"apc_paid":{"value":2880,"currency":"USD","value_usd":2880},"fwci":0.3783,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.56091158,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"1045","issue":null,"first_page":"115279","last_page":"115279"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12162","display_name":"Cellular Automata and Applications","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/alphabet","display_name":"Alphabet","score":0.8088326454162598},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6596991419792175},{"id":"https://openalex.org/keywords/levenshtein-distance","display_name":"Levenshtein distance","score":0.5642098784446716},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.5404158234596252},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.5083257555961609},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3867080509662628},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3807908892631531},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1641310155391693},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.14251765608787537},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.12730258703231812},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.11485162377357483}],"concepts":[{"id":"https://openalex.org/C112876837","wikidata":"https://www.wikidata.org/wiki/Q837518","display_name":"Alphabet","level":2,"score":0.8088326454162598},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6596991419792175},{"id":"https://openalex.org/C2777515626","wikidata":"https://www.wikidata.org/wiki/Q496939","display_name":"Levenshtein distance","level":2,"score":0.5642098784446716},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.5404158234596252},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.5083257555961609},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3867080509662628},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3807908892631531},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1641310155391693},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.14251765608787537},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.12730258703231812},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.11485162377357483}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1016/j.tcs.2025.115279","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.tcs.2025.115279","pdf_url":null,"source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"},{"id":"pmh:oai:www.utupub.fi:10024/183169","is_oa":true,"landing_page_url":"https://www.utupub.fi/handle/10024/183169","pdf_url":"https://www.utupub.fi/bitstream/10024/183169/1/Junnila_etal_levenshteins_sequence_2025.pdf","source":{"id":"https://openalex.org/S4306402470","display_name":"UTUPub (University of Turku)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I155660961","host_organization_name":"University of Turku","host_organization_lineage":["https://openalex.org/I155660961"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"doi:10.1016/j.tcs.2025.115279","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.tcs.2025.115279","pdf_url":null,"source":{"id":"https://openalex.org/S90727058","display_name":"Theoretical Computer Science","issn_l":"0304-3975","issn":["0304-3975","1879-2294"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Theoretical Computer Science","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.5099999904632568,"display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G5284636186","display_name":"Codes for Information Retrieval and Sensor Networks","funder_award_id":"338797","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G6665709285","display_name":"Limits of advanced polymer-based memory systems","funder_award_id":"358718","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"}],"funders":[{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W1547576067","https://openalex.org/W1969151232","https://openalex.org/W2025383314","https://openalex.org/W2114487425","https://openalex.org/W2152919403","https://openalex.org/W2170484108","https://openalex.org/W2189494032","https://openalex.org/W2793140590","https://openalex.org/W2884699236","https://openalex.org/W2899464095","https://openalex.org/W2911985665","https://openalex.org/W2962809499","https://openalex.org/W2963412269","https://openalex.org/W2963561675","https://openalex.org/W3023309279","https://openalex.org/W3028579427","https://openalex.org/W3048629723","https://openalex.org/W3199523352","https://openalex.org/W3213328810","https://openalex.org/W4240126904","https://openalex.org/W4250655566","https://openalex.org/W4316652496","https://openalex.org/W4365800074","https://openalex.org/W4386952459","https://openalex.org/W4387146094","https://openalex.org/W4398150888","https://openalex.org/W4401693785","https://openalex.org/W6656576250","https://openalex.org/W6665204704","https://openalex.org/W6757942300","https://openalex.org/W6798960783","https://openalex.org/W6800905550","https://openalex.org/W6849706528","https://openalex.org/W6855838200","https://openalex.org/W6856847390"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2051487156","https://openalex.org/W2575897682","https://openalex.org/W2081797125","https://openalex.org/W2996079066","https://openalex.org/W2073681303","https://openalex.org/W1967312449","https://openalex.org/W1986094003","https://openalex.org/W2096044998","https://openalex.org/W1424383737"],"abstract_inverted_index":{"The":[0,137],"problem":[1],"of":[2,6,13,19,64,93],"storing":[3],"large":[4],"amounts":[5],"information":[7,54],"safely":[8],"for":[9,107,116,128,139],"a":[10,58],"long":[11],"period":[12],"time":[14],"has":[15],"become":[16],"essential.":[17],"One":[18],"the":[20,28,34,51,69,75,89,94,108,117,123,132,158,168],"most":[21],"promising":[22],"new":[23],"data":[24,30,119],"storage":[25,31,38],"mediums":[26],"are":[27,40,102,114],"polymer-based":[29,118],"systems,":[32],"like":[33],"DNA-storage":[35,129],"system.":[36],"These":[37],"systems":[39],"highly":[41],"durable":[42],"and":[43,86,152],"they":[44],"consume":[45],"very":[46],"little":[47],"energy":[48],"to":[49,82,87,131,157],"store":[50],"data.":[52],"When":[53],"is":[55,72,80,126],"retrieved":[56],"from":[57],"storage,":[59],"however,":[60],"several":[61],"different":[62,151],"types":[63,174],"errors":[65,85],"may":[66],"occur":[67],"in":[68,135,148,167],"process.":[70],"It":[71],"known":[73],"that":[74,164],"Levenshtein's":[76,98],"sequence":[77,99],"reconstruction":[78,100],"framework":[79],"well-suited":[81],"overcome":[83],"such":[84],"retrieve":[88],"original":[90],"information.":[91],"Many":[92],"previous":[95],"results":[96,138],"regarding":[97],"method":[101],"so":[103],"far":[104],"given":[105],"only":[106],"binary":[109,159],"alphabet.":[110],"However,":[111],"larger":[112,140],"alphabets":[113,141],"natural":[115],"storage.":[120],"For":[121],"example,":[122],"quaternary":[124],"alphabet":[125,169],"suitable":[127],"due":[130],"four":[133],"amino-acids":[134],"DNA.":[136],"often":[142],"require,":[143],"as":[144],"we":[145,162],"will":[146],"see":[147],"this":[149],"work,":[150],"more":[153],"complicated":[154],"techniques":[155],"compared":[156],"case.":[160],"Moreover,":[161],"show":[163],"an":[165],"increase":[166],"size":[170],"makes":[171],"some":[172],"error":[173],"behave":[175],"rather":[176],"surprisingly.":[177]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-08-25T07:29:55.448023","created_date":"2025-10-10T00:00:00"}
