{"id":"https://openalex.org/W4410465923","doi":"https://doi.org/10.1016/j.knosys.2025.113794","title":"Coupling hyperspectral imaging and deep learning to detect bloom-forming toxic cyanobacteria in mixed assemblages","display_name":"Coupling hyperspectral imaging and deep learning to detect bloom-forming toxic cyanobacteria in mixed assemblages","publication_year":2025,"publication_date":"2025-05-17","ids":{"openalex":"https://openalex.org/W4410465923","doi":"https://doi.org/10.1016/j.knosys.2025.113794"},"language":"en","primary_location":{"id":"doi:10.1016/j.knosys.2025.113794","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.knosys.2025.113794","pdf_url":null,"source":{"id":"https://openalex.org/S10169007","display_name":"Knowledge-Based Systems","issn_l":"0950-7051","issn":["0950-7051","1872-7409"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Knowledge-Based Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1016/j.knosys.2025.113794","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103066477","display_name":"Claudia Fournier","orcid":"https://orcid.org/0000-0002-4682-3956"},"institutions":[{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Claudia Fournier","raw_affiliation_strings":["Departamento de Biolog\u00eda, Universidad Aut\u00f3noma de Madrid, 28049 Madrid, Spain"],"raw_orcid":"https://orcid.org/0000-0002-4682-3956","affiliations":[{"raw_affiliation_string":"Departamento de Biolog\u00eda, Universidad Aut\u00f3noma de Madrid, 28049 Madrid, Spain","institution_ids":["https://openalex.org/I63634437"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066018617","display_name":"Samuel Cir\u00e9s","orcid":"https://orcid.org/0000-0001-8272-5512"},"institutions":[{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Samuel Cir\u00e9s","raw_affiliation_strings":["Departamento de Biolog\u00eda, Universidad Aut\u00f3noma de Madrid, 28049 Madrid, Spain"],"raw_orcid":"https://orcid.org/0000-0001-8272-5512","affiliations":[{"raw_affiliation_string":"Departamento de Biolog\u00eda, Universidad Aut\u00f3noma de Madrid, 28049 Madrid, Spain","institution_ids":["https://openalex.org/I63634437"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026895527","display_name":"Mohammadmehdi Saberioon","orcid":"https://orcid.org/0000-0003-1627-4957"},"institutions":[{"id":"https://openalex.org/I4210152878","display_name":"GFZ Helmholtz Centre for Geosciences","ror":"https://ror.org/04z8jg394","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I4210152878"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Mohammadmehdi Saberioon","raw_affiliation_strings":["Section 1.4 Remote Sensing and Geoinformatics, Helmholtz Centre for Geosciences (GFZ), Telegrafenberg, 14473 Potsdam, Germany"],"raw_orcid":"https://orcid.org/0000-0003-1627-4957","affiliations":[{"raw_affiliation_string":"Section 1.4 Remote Sensing and Geoinformatics, Helmholtz Centre for Geosciences (GFZ), Telegrafenberg, 14473 Potsdam, Germany","institution_ids":["https://openalex.org/I4210152878"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050933778","display_name":"Paula Mart\u00edn-Gonz\u00e1lez","orcid":"https://orcid.org/0009-0008-3864-9645"},"institutions":[{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Paula Mart\u00edn-Gonz\u00e1lez","raw_affiliation_strings":["Departamento de Biolog\u00eda, Universidad Aut\u00f3noma de Madrid, 28049 Madrid, Spain"],"raw_orcid":"https://orcid.org/0009-0008-3864-9645","affiliations":[{"raw_affiliation_string":"Departamento de Biolog\u00eda, Universidad Aut\u00f3noma de Madrid, 28049 Madrid, Spain","institution_ids":["https://openalex.org/I63634437"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5036206900","display_name":"Antonio Quesada","orcid":"https://orcid.org/0000-0002-8913-5993"},"institutions":[{"id":"https://openalex.org/I63634437","display_name":"Universidad Aut\u00f3noma de Madrid","ror":"https://ror.org/01cby8j38","country_code":"ES","type":"education","lineage":["https://openalex.org/I63634437"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Antonio Quesada","raw_affiliation_strings":["Departamento de Biolog\u00eda, Universidad Aut\u00f3noma de Madrid, 28049 Madrid, Spain"],"raw_orcid":"https://orcid.org/0000-0002-8913-5993","affiliations":[{"raw_affiliation_string":"Departamento de Biolog\u00eda, Universidad Aut\u00f3noma de Madrid, 28049 Madrid, Spain","institution_ids":["https://openalex.org/I63634437"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5036206900"],"corresponding_institution_ids":["https://openalex.org/I63634437"],"apc_list":{"value":3130,"currency":"USD","value_usd":3130},"apc_paid":{"value":3130,"currency":"USD","value_usd":3130},"fwci":1.2569,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.79498954,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":98},"biblio":{"volume":"322","issue":null,"first_page":"113794","last_page":"113794"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T14249","display_name":"Water Quality Monitoring and Analysis","score":0.960099995136261,"subfield":{"id":"https://openalex.org/subfields/2311","display_name":"Industrial and Manufacturing Engineering"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T14249","display_name":"Water Quality Monitoring and Analysis","score":0.960099995136261,"subfield":{"id":"https://openalex.org/subfields/2311","display_name":"Industrial and Manufacturing Engineering"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10640","display_name":"Spectroscopy and Chemometric Analyses","score":0.9388999938964844,"subfield":{"id":"https://openalex.org/subfields/1602","display_name":"Analytical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10032","display_name":"Marine and coastal ecosystems","score":0.9373000264167786,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/hyperspectral-imaging","display_name":"Hyperspectral imaging","score":0.8824799060821533},{"id":"https://openalex.org/keywords/cyanobacteria","display_name":"Cyanobacteria","score":0.8474320769309998},{"id":"https://openalex.org/keywords/bloom","display_name":"Bloom","score":0.7223919630050659},{"id":"https://openalex.org/keywords/coupling","display_name":"Coupling (piping)","score":0.5000770092010498},{"id":"https://openalex.org/keywords/environmental-science","display_name":"Environmental science","score":0.4471834897994995},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33248668909072876},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2516252398490906},{"id":"https://openalex.org/keywords/geology","display_name":"Geology","score":0.24431666731834412},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.2311697006225586},{"id":"https://openalex.org/keywords/oceanography","display_name":"Oceanography","score":0.20773911476135254},{"id":"https://openalex.org/keywords/paleontology","display_name":"Paleontology","score":0.11076149344444275},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.09625968337059021},{"id":"https://openalex.org/keywords/metallurgy","display_name":"Metallurgy","score":0.06257036328315735}],"concepts":[{"id":"https://openalex.org/C159078339","wikidata":"https://www.wikidata.org/wiki/Q959005","display_name":"Hyperspectral imaging","level":2,"score":0.8824799060821533},{"id":"https://openalex.org/C2779669040","wikidata":"https://www.wikidata.org/wiki/Q93315","display_name":"Cyanobacteria","level":3,"score":0.8474320769309998},{"id":"https://openalex.org/C155567681","wikidata":"https://www.wikidata.org/wiki/Q2987425","display_name":"Bloom","level":2,"score":0.7223919630050659},{"id":"https://openalex.org/C131584629","wikidata":"https://www.wikidata.org/wiki/Q4308705","display_name":"Coupling (piping)","level":2,"score":0.5000770092010498},{"id":"https://openalex.org/C39432304","wikidata":"https://www.wikidata.org/wiki/Q188847","display_name":"Environmental science","level":0,"score":0.4471834897994995},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33248668909072876},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2516252398490906},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.24431666731834412},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.2311697006225586},{"id":"https://openalex.org/C111368507","wikidata":"https://www.wikidata.org/wiki/Q43518","display_name":"Oceanography","level":1,"score":0.20773911476135254},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.11076149344444275},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.09625968337059021},{"id":"https://openalex.org/C191897082","wikidata":"https://www.wikidata.org/wiki/Q11467","display_name":"Metallurgy","level":1,"score":0.06257036328315735}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1016/j.knosys.2025.113794","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.knosys.2025.113794","pdf_url":null,"source":{"id":"https://openalex.org/S10169007","display_name":"Knowledge-Based Systems","issn_l":"0950-7051","issn":["0950-7051","1872-7409"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Knowledge-Based Systems","raw_type":"journal-article"},{"id":"pmh:oai:repositorio.uam.es:10486/719899","is_oa":true,"landing_page_url":"http://hdl.handle.net/10486/719899","pdf_url":null,"source":{"id":"https://openalex.org/S4306400964","display_name":"Biblos-e Archivo (Universidad Aut\u00f3noma de Madrid)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I63634437","host_organization_name":"Universidad Aut\u00f3noma de Madrid","host_organization_lineage":["https://openalex.org/I63634437"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":{"id":"doi:10.1016/j.knosys.2025.113794","is_oa":true,"landing_page_url":"https://doi.org/10.1016/j.knosys.2025.113794","pdf_url":null,"source":{"id":"https://openalex.org/S10169007","display_name":"Knowledge-Based Systems","issn_l":"0950-7051","issn":["0950-7051","1872-7409"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320990","host_organization_name":"Elsevier BV","host_organization_lineage":["https://openalex.org/P4310320990"],"host_organization_lineage_names":["Elsevier BV"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Knowledge-Based Systems","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4399999976158142,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"awards":[{"id":"https://openalex.org/G2479720655","display_name":null,"funder_award_id":"PCI2021\\u2013121915","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G6997126850","display_name":null,"funder_award_id":"869178","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320321585","display_name":"Universidad Complutense de Madrid","ror":"https://ror.org/02p0gd045"},{"id":"https://openalex.org/F4320322930","display_name":"Ministerio de Ciencia e Innovaci\u00f3n","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320335598","display_name":"Agencia Estatal de Investigaci\u00f3n","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W124755984","https://openalex.org/W592146121","https://openalex.org/W1486754841","https://openalex.org/W1575845033","https://openalex.org/W1964179500","https://openalex.org/W1982965630","https://openalex.org/W1996474597","https://openalex.org/W2003263155","https://openalex.org/W2057169128","https://openalex.org/W2080791625","https://openalex.org/W2089468765","https://openalex.org/W2144328441","https://openalex.org/W2261059368","https://openalex.org/W2388722303","https://openalex.org/W2480295938","https://openalex.org/W2587726327","https://openalex.org/W2896782565","https://openalex.org/W2911964244","https://openalex.org/W2942454403","https://openalex.org/W2965720267","https://openalex.org/W3018952706","https://openalex.org/W3185436540","https://openalex.org/W3206466934","https://openalex.org/W4200477047","https://openalex.org/W4200599765","https://openalex.org/W4211010233","https://openalex.org/W4213115372","https://openalex.org/W4220912669","https://openalex.org/W4226242806","https://openalex.org/W4282552404","https://openalex.org/W4282561648","https://openalex.org/W4309581918","https://openalex.org/W4324257321","https://openalex.org/W4360946184","https://openalex.org/W4361225270","https://openalex.org/W4382536268","https://openalex.org/W4386615366","https://openalex.org/W4388797494","https://openalex.org/W4395662930","https://openalex.org/W6606549717","https://openalex.org/W6670976425","https://openalex.org/W6688271602","https://openalex.org/W6809923514","https://openalex.org/W6854229008","https://openalex.org/W6856084669"],"related_works":["https://openalex.org/W2072166414","https://openalex.org/W3209970181","https://openalex.org/W2060875994","https://openalex.org/W3034375524","https://openalex.org/W4230131218","https://openalex.org/W2404757046","https://openalex.org/W2384999993","https://openalex.org/W2388114481","https://openalex.org/W2361137974","https://openalex.org/W2349824518"],"abstract_inverted_index":{"ABSTRACT":[0],"Cyanobacterial":[1],"blooms,":[2],"particularly":[3],"those":[4],"dominated":[5],"by":[6,215],"toxin-producing":[7],"species,":[8,209],"pose":[9],"critical":[10],"risks":[11],"to":[12,52,122,142,154,162,174],"ecosystems":[13],"and":[14,49,93,113,133,140,147,169,198,201,231,240,244],"public":[15],"health.":[16],"Monitoring":[17],"strategies":[18],"have":[19,235],"evolved":[20],"significantly":[21],"in":[22,60,75,81,95,195,203,217,247],"the":[23,39,54,120,164,176,183,205],"last":[24],"decades,":[25],"but":[26],"still":[27],"lack":[28],"near":[29],"real-time":[30],"capabilities":[31],"for":[32,238],"effective":[33],"risk":[34,245],"estimations.":[35],"This":[36,69],"study":[37],"explores":[38],"potential":[40],"of":[41,56,98,102,126,207],"combining":[42],"hyperspectral":[43],"imagery":[44],"(HSI)":[45],"with":[46,210],"machine":[47],"learning":[48,51],"deep":[50],"detect":[53],"presence":[55],"specific":[57],"cyanobacterial":[58,78,91,106,242],"taxa":[59,79],"complex":[61],"mixtures,":[62],"even":[63],"when":[64],"present":[65,222],"at":[66,223],"low":[67,224],"proportions.":[68,83],"work":[70],"simulates":[71],"a":[72],"real-world":[73],"scenario":[74],"which":[76],"different":[77],"coexist":[80],"varying":[82],"A":[84],"HSI":[85],"library":[86],"was":[87,160],"created":[88],"from":[89,119],"pure":[90,197],"cultures":[92],"combined":[94],"binary":[96],"mixtures":[97],"three":[99],"species":[100],"representative":[101],"bloom-forming":[103],"potentially":[104],"toxic":[105],"genera:":[107],"Microcystis":[108],"aeruginosa,":[109],"Chrysosporum":[110],"ovalisporum":[111],",":[112],"Dolichospermum":[114],"crassum":[115],".":[116],"Reflectance":[117],"spectra":[118,137],"visible":[121],"near-infrared":[123],"(VIS-NIR)":[124],"range":[125],"each":[127,208],"image":[128],"were":[129,138,172,228],"extracted,":[130],"randomly":[131],"grouped":[132],"filtered.":[134],"The":[135,186],"resulting":[136,187],"preprocessed":[139],"used":[141],"develop":[143],"Random":[144],"Forest":[145],"(RF)":[146],"Neural":[148],"Network":[149],"(NN)":[150],"classification":[151,170],"models":[152,188],"intended":[153],"classify":[155],"these":[156],"mixtures.":[157],"Hyperparameter":[158],"optimization":[159],"performed":[161],"achieve":[163],"best":[165],"configuration.":[166],"Learning":[167],"curves":[168],"metrics":[171],"utilized":[173],"monitor":[175],"overall":[177],"training":[178],"process":[179],"as":[180,182],"well":[181],"model":[184],"performance.":[185],"demonstrated":[189],"remarkable":[190],"performance,":[191],"achieving":[192],"91-95%":[193],"accuracy":[194],"classifying":[196],"mixed":[199],"assemblages,":[200],"85-90%":[202],"defining":[204],"proportion":[206],"NNs":[211],"consistently":[212],"outperforming":[213],"RFs":[214],"4-6%":[216],"both":[218],"tasks.":[219],"Even":[220],"cyanobacteria":[221],"proportions":[225],"(e.g.,":[226],"6%)":[227],"effectively":[229],"detected":[230],"quantified.":[232],"These":[233],"findings":[234],"important":[236],"implications":[237],"improving":[239],"automating":[241],"monitoring":[243],"assessment":[246],"current":[248],"water":[249],"management":[250],"strategies.":[251]},"counts_by_year":[{"year":2026,"cited_by_count":2}],"updated_date":"2026-06-15T08:34:33.830935","created_date":"2025-10-10T00:00:00"}
